| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231433
Identifier: 17231433
GI number: 17231433
Start: 4759201
End: 4760214
Strand: Reverse
Name: 17231433
Synonym: all3941
Alternate gene names: NA
Gene position: 4760214-4759201 (Counterclockwise)
Preceding gene: 17231434
Following gene: 17231432
Centisome position: 74.22
GC content: 42.31
Gene sequence:
>1014_bases ATGGTTAAATCCCGTTATATCTGTTTGGCTGTTGCAGCTTGCGTCATAGTCTCCCTGAGTTCTTGTAGTGGGGGTACACC AACAGCCGAAAATTCACAGCCAGCTAACAGCAATTCTGCTACCCAAACTACGGAAGCTGTCAACCATAGCAGTCATGGTA GTAAAGCCAAAATTAATATCAATACTGCTATCTTGTCGGAATTGGATAAGTTTGAAGCTAAGTTAGGTGTACCAGCATTA TCAAACAAAATTCAAGGTAGTCGTCCCTACGGTAGTCCAGAGGATTTAGTTAGCAAGAAAGTGATTACTCAAGAACAGTT CGACCAAATTAAAGACATAGTGACTGTTCAAGAAGTGGTGTTAACAGGTGAAGCTAAAGATGTGGACTACATGACCAAAT TGGGGTTAATGAAGGGACATCTTTTGGTAGCGCAAGAATTACTAGACCAAAATCAGCCAAAACAGGCAGAACCCCATATA GGACACCCTGTGGAAGAGATTTATGTTGATGTAGAAGAACAGCTTAATGAGCGTAAAGTTAAAGAATTTAAGACAACGTT GGTTAGTTTGCAAGATTTAGTCAAATCGAAACCAAAGGATGCCAAGGTAAAAACTGATTTTACAACTTCCGTGCAGTCAG TTGATGGGGCGATCGCCACTTTACCAGCAGCCCAACGCAGCAAACCCGGATTTGTCCTACAAGTGATTAACGGCTTGTTG GATGCAGCTAACTCCGAATATGGGGCGGCGATCGCAGATGGTAAAATTGCGGCAGCGATTGAATATCAAGATTCTCGCGG TTTTATTGTCTACGCCAACGAATTGTATAAAGGAATTTCCTCTCAAGTAGCACAGGCCAACCCGGAAGCAGACAAAGCCA TTAACACTAGTCTTGCAGAACTAACAAAAGTCTGGCCAGCAGCTATTCCACCAGCGACACCAATAAAAACCCCCGAAGAA GTTACTAAACTGGTAAAAACTATTGAGCTAAACTCGCAAAAAGTTATCGACTAA
Upstream 100 bases:
>100_bases TCATCATAATACCTATTGCAAAAATATATCAGATTTTATCTTAAGTATATAGCTGAAAAATCTCGCAATTTATGGGTTTT TATCACCTTTAGGAATCAAA
Downstream 100 bases:
>100_bases TCAAGTACGCAAGCACAAAAATAGCCCAAGGACTCACTTGGAGGCGGAAACTGAGAAGTTTAAAATGGATAAGAAGTGAG ATAACTGTTAAAAGTTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MVKSRYICLAVAACVIVSLSSCSGGTPTAENSQPANSNSATQTTEAVNHSSHGSKAKININTAILSELDKFEAKLGVPAL SNKIQGSRPYGSPEDLVSKKVITQEQFDQIKDIVTVQEVVLTGEAKDVDYMTKLGLMKGHLLVAQELLDQNQPKQAEPHI GHPVEEIYVDVEEQLNERKVKEFKTTLVSLQDLVKSKPKDAKVKTDFTTSVQSVDGAIATLPAAQRSKPGFVLQVINGLL DAANSEYGAAIADGKIAAAIEYQDSRGFIVYANELYKGISSQVAQANPEADKAINTSLAELTKVWPAAIPPATPIKTPEE VTKLVKTIELNSQKVID
Sequences:
>Translated_337_residues MVKSRYICLAVAACVIVSLSSCSGGTPTAENSQPANSNSATQTTEAVNHSSHGSKAKININTAILSELDKFEAKLGVPAL SNKIQGSRPYGSPEDLVSKKVITQEQFDQIKDIVTVQEVVLTGEAKDVDYMTKLGLMKGHLLVAQELLDQNQPKQAEPHI GHPVEEIYVDVEEQLNERKVKEFKTTLVSLQDLVKSKPKDAKVKTDFTTSVQSVDGAIATLPAAQRSKPGFVLQVINGLL DAANSEYGAAIADGKIAAAIEYQDSRGFIVYANELYKGISSQVAQANPEADKAINTSLAELTKVWPAAIPPATPIKTPEE VTKLVKTIELNSQKVID >Mature_337_residues MVKSRYICLAVAACVIVSLSSCSGGTPTAENSQPANSNSATQTTEAVNHSSHGSKAKININTAILSELDKFEAKLGVPAL SNKIQGSRPYGSPEDLVSKKVITQEQFDQIKDIVTVQEVVLTGEAKDVDYMTKLGLMKGHLLVAQELLDQNQPKQAEPHI GHPVEEIYVDVEEQLNERKVKEFKTTLVSLQDLVKSKPKDAKVKTDFTTSVQSVDGAIATLPAAQRSKPGFVLQVINGLL DAANSEYGAAIADGKIAAAIEYQDSRGFIVYANELYKGISSQVAQANPEADKAINTSLAELTKVWPAAIPPATPIKTPEE VTKLVKTIELNSQKVID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36223; Mature: 36223
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKSRYICLAVAACVIVSLSSCSGGTPTAENSQPANSNSATQTTEAVNHSSHGSKAKINI CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEE NTAILSELDKFEAKLGVPALSNKIQGSRPYGSPEDLVSKKVITQEQFDQIKDIVTVQEVV HHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTGEAKDVDYMTKLGLMKGHLLVAQELLDQNQPKQAEPHIGHPVEEIYVDVEEQLNERKV HCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH KEFKTTLVSLQDLVKSKPKDAKVKTDFTTSVQSVDGAIATLPAAQRSKPGFVLQVINGLL HHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCHHHCCCCHHCCCCCHHHHHHHHHH DAANSEYGAAIADGKIAAAIEYQDSRGFIVYANELYKGISSQVAQANPEADKAINTSLAE HHCCCCCCCEEECCCEEEEEEEECCCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LTKVWPAAIPPATPIKTPEEVTKLVKTIELNSQKVID HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure MVKSRYICLAVAACVIVSLSSCSGGTPTAENSQPANSNSATQTTEAVNHSSHGSKAKINI CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEE NTAILSELDKFEAKLGVPALSNKIQGSRPYGSPEDLVSKKVITQEQFDQIKDIVTVQEVV HHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTGEAKDVDYMTKLGLMKGHLLVAQELLDQNQPKQAEPHIGHPVEEIYVDVEEQLNERKV HCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH KEFKTTLVSLQDLVKSKPKDAKVKTDFTTSVQSVDGAIATLPAAQRSKPGFVLQVINGLL HHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCHHHCCCCHHCCCCCHHHHHHHHHH DAANSEYGAAIADGKIAAAIEYQDSRGFIVYANELYKGISSQVAQANPEADKAINTSLAE HHCCCCCCCEEECCCEEEEEEEECCCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LTKVWPAAIPPATPIKTPEEVTKLVKTIELNSQKVID HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA