| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231432
Identifier: 17231432
GI number: 17231432
Start: 4758590
End: 4759024
Strand: Reverse
Name: 17231432
Synonym: all3940
Alternate gene names: NA
Gene position: 4759024-4758590 (Counterclockwise)
Preceding gene: 17231433
Following gene: 17231431
Centisome position: 74.2
GC content: 41.15
Gene sequence:
>435_bases ATGCAAGAGCTTAACCAAAATAAGGCCATTGACCTACTTAACGCCATCATGGAATTTGAACTCGCTGGCGTAGTGCGCTA TACACATTATTCCTTGATGGTAACCGGCCCTAATCGCATTCCCATTGTTGCTTTCTTCAAAGCACAAGCCAGTGAATCTC TACTCCATGCTCAACAAGTAGGAGAAATTCTCACAGGTTTAGATGGACATCCCACCCTGAGAATTGCCCCAATGGAGGAA ACCTACAAGCATACTGTTAAGGATATCCTACAAGAAAGCTTGAACCATGAGAGAAAGGCATTGGAAATGTATAAATCTTT GTTAGATACTGTAGCCAATGCCAGTATTTATCTAGAAGAATTCGCTCGCAGCATGATTGGACAAGAAGAGCTACACAATC TCGAATTGAAAAAAATGCTACGAGATTTTATCTAG
Upstream 100 bases:
>100_bases TGAGATAACTGTTAAAAGTTAAAAGTGAACATTATTGAGACTTTTAACACCTGTACCCTTTTACTCATGACGCTCCATTC GTAATTTTAATCAACCACTC
Downstream 100 bases:
>100_bases TCAATAGTCAATAGTCATTTGTCAGTTGCTATGAAAATAAATCATTTACAACTGACAACTGACCACTGACAACTGACCAC TGACCATAAACAACTGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: Ferritin And Dps; Bacterioferritin; Ferritin-Like Domain Subfamily; Dps Family Ferritin
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MQELNQNKAIDLLNAIMEFELAGVVRYTHYSLMVTGPNRIPIVAFFKAQASESLLHAQQVGEILTGLDGHPTLRIAPMEE TYKHTVKDILQESLNHERKALEMYKSLLDTVANASIYLEEFARSMIGQEELHNLELKKMLRDFI
Sequences:
>Translated_144_residues MQELNQNKAIDLLNAIMEFELAGVVRYTHYSLMVTGPNRIPIVAFFKAQASESLLHAQQVGEILTGLDGHPTLRIAPMEE TYKHTVKDILQESLNHERKALEMYKSLLDTVANASIYLEEFARSMIGQEELHNLELKKMLRDFI >Mature_144_residues MQELNQNKAIDLLNAIMEFELAGVVRYTHYSLMVTGPNRIPIVAFFKAQASESLLHAQQVGEILTGLDGHPTLRIAPMEE TYKHTVKDILQESLNHERKALEMYKSLLDTVANASIYLEEFARSMIGQEELHNLELKKMLRDFI
Specific function: Unknown
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16471; Mature: 16471
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQELNQNKAIDLLNAIMEFELAGVVRYTHYSLMVTGPNRIPIVAFFKAQASESLLHAQQV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEHHHHHHHHHHHHHHH GEILTGLDGHPTLRIAPMEETYKHTVKDILQESLNHERKALEMYKSLLDTVANASIYLEE HHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FARSMIGQEELHNLELKKMLRDFI HHHHHHCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQELNQNKAIDLLNAIMEFELAGVVRYTHYSLMVTGPNRIPIVAFFKAQASESLLHAQQV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEHHHHHHHHHHHHHHH GEILTGLDGHPTLRIAPMEETYKHTVKDILQESLNHERKALEMYKSLLDTVANASIYLEE HHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FARSMIGQEELHNLELKKMLRDFI HHHHHHCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA