Click here to switch to the map view.

The map label for this gene is btuF [H]

Identifier: 17231430

GI number: 17231430

Start: 4756241

End: 4757164

Strand: Direct

Name: btuF [H]

Synonym: alr3938

Alternate gene names: 17231430

Gene position: 4756241-4757164 (Clockwise)

Preceding gene: 17231429

Following gene: 161353740

Centisome position: 74.16

GC content: 37.12

Gene sequence:

>924_bases
ATGCTGCGTCGCGGGATATTATTTACTTTTGGAATTTTCTTGAGCATAATTTTAATCGCGTGTAATACTACAAATACTCA
GCAGCCACAAGCACAAGCTACGCAAAGTATTACAACACCTAATACTCCATCTCAAGAATTAGCAAAATTATCTGCTAAAA
GAGTTGTGACACTCTCTTCTCTAACCACAGATATTATTTTTCAACTGGATAAAACAAAGCTTGTAGGTATTTCTGGTAGC
TCATTATTCAAAAATGACCCCCGTTTCCAAGATATACCCCGTATCAGCGAAGGTCAAAGTCCCCCCAATTTGGAAAAAAT
TGTGGCGCTCAAGCCTGATTTAGTCATTGGTGCAGAAGGTTTTTCTAATCAACCAATTCAAAGACTCCAACAATTAGGTA
TTCCCACCTTACTGACTCAAATAAATACATGGAAGTCTTTAGAAGAAATTACAGCAAAGCTGGCTCAGTTAATTGATGTT
AATCCCCAACCTTTATTAGAACGTTATCGGAGTTTTCTAGGGGATAAGCCAGGAACAAATACTTCTACTTTAGTTCTGGT
TAGTAGTCAACCAATTTTAGCTCCCAATAAGAATAGTTGGGCTGGGGATTTACTCGAAAAATTCCAAGTAAAAAATTTAG
CAGCAGAACTACAAGGAAAAAGCCCAATCGCTGGTTATGTAACTCTTTCGGCTGAGAAAGTTTTAGAAGCTAATCCAGAA
GCGGTTGTTCTAATTACTCCTCCTCAAGGTGGTTCAAAAACAGAAGTTTTAGATTCTTTCAAGAAAGAGAGTTTTTGGCA
AAAATTACCCGCGACTAAGAATAATCGAGTCTATGTTTTTGACTATTATGGGTTAGTAAATCCAGGTAGTATAGATGCTA
TAGAGAAGGCTTGTGAGCAGATTAAGAAAGATTTGCTAGCTTAA

Upstream 100 bases:

>100_bases
AGAGTAATACCGAAATTTGTCATATCCAGATAGACTTTTGATCTAGCATTGCTATATAACTGGCTGATAGTTATATCTTT
AGTCAAAAAGGAATTATTAT

Downstream 100 bases:

>100_bases
GATTTCAGATGATACCAATTCAAAATTCACAGTTTCTTCAACACGTTGCGCGTAAACCTCCTGGGAAGCAAGCGTTCGAC
TAAACTCGCACCCAAGTCTA

Product: ABC transporter iron binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MLRRGILFTFGIFLSIILIACNTTNTQQPQAQATQSITTPNTPSQELAKLSAKRVVTLSSLTTDIIFQLDKTKLVGISGS
SLFKNDPRFQDIPRISEGQSPPNLEKIVALKPDLVIGAEGFSNQPIQRLQQLGIPTLLTQINTWKSLEEITAKLAQLIDV
NPQPLLERYRSFLGDKPGTNTSTLVLVSSQPILAPNKNSWAGDLLEKFQVKNLAAELQGKSPIAGYVTLSAEKVLEANPE
AVVLITPPQGGSKTEVLDSFKKESFWQKLPATKNNRVYVFDYYGLVNPGSIDAIEKACEQIKKDLLA

Sequences:

>Translated_307_residues
MLRRGILFTFGIFLSIILIACNTTNTQQPQAQATQSITTPNTPSQELAKLSAKRVVTLSSLTTDIIFQLDKTKLVGISGS
SLFKNDPRFQDIPRISEGQSPPNLEKIVALKPDLVIGAEGFSNQPIQRLQQLGIPTLLTQINTWKSLEEITAKLAQLIDV
NPQPLLERYRSFLGDKPGTNTSTLVLVSSQPILAPNKNSWAGDLLEKFQVKNLAAELQGKSPIAGYVTLSAEKVLEANPE
AVVLITPPQGGSKTEVLDSFKKESFWQKLPATKNNRVYVFDYYGLVNPGSIDAIEKACEQIKKDLLA
>Mature_307_residues
MLRRGILFTFGIFLSIILIACNTTNTQQPQAQATQSITTPNTPSQELAKLSAKRVVTLSSLTTDIIFQLDKTKLVGISGS
SLFKNDPRFQDIPRISEGQSPPNLEKIVALKPDLVIGAEGFSNQPIQRLQQLGIPTLLTQINTWKSLEEITAKLAQLIDV
NPQPLLERYRSFLGDKPGTNTSTLVLVSSQPILAPNKNSWAGDLLEKFQVKNLAAELQGKSPIAGYVTLSAEKVLEANPE
AVVLITPPQGGSKTEVLDSFKKESFWQKLPATKNNRVYVFDYYGLVNPGSIDAIEKACEQIKKDLLA

Specific function: Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786353, Length=211, Percent_Identity=31.2796208530806, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 33673; Mature: 33673

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRRGILFTFGIFLSIILIACNTTNTQQPQAQATQSITTPNTPSQELAKLSAKRVVTLSS
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHEEHHHH
LTTDIIFQLDKTKLVGISGSSLFKNDPRFQDIPRISEGQSPPNLEKIVALKPDLVIGAEG
HHHHHHEEECCCEEEECCCCHHCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCEEEECCC
FSNQPIQRLQQLGIPTLLTQINTWKSLEEITAKLAQLIDVNPQPLLERYRSFLGDKPGTN
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
TSTLVLVSSQPILAPNKNSWAGDLLEKFQVKNLAAELQGKSPIAGYVTLSAEKVLEANPE
CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHCCCCC
AVVLITPPQGGSKTEVLDSFKKESFWQKLPATKNNRVYVFDYYGLVNPGSIDAIEKACEQ
EEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHH
IKKDLLA
HHHHHCC
>Mature Secondary Structure
MLRRGILFTFGIFLSIILIACNTTNTQQPQAQATQSITTPNTPSQELAKLSAKRVVTLSS
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHEEHHHH
LTTDIIFQLDKTKLVGISGSSLFKNDPRFQDIPRISEGQSPPNLEKIVALKPDLVIGAEG
HHHHHHEEECCCEEEECCCCHHCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCEEEECCC
FSNQPIQRLQQLGIPTLLTQINTWKSLEEITAKLAQLIDVNPQPLLERYRSFLGDKPGTN
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
TSTLVLVSSQPILAPNKNSWAGDLLEKFQVKNLAAELQGKSPIAGYVTLSAEKVLEANPE
CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHCCCCC
AVVLITPPQGGSKTEVLDSFKKESFWQKLPATKNNRVYVFDYYGLVNPGSIDAIEKACEQ
EEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHH
IKKDLLA
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA