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The map label for this gene is cbiM [H]

Identifier: 161353740

GI number: 161353740

Start: 4761869

End: 4762555

Strand: Direct

Name: cbiM [H]

Synonym: alr3943

Alternate gene names: 161353740

Gene position: 4761869-4762555 (Clockwise)

Preceding gene: 17231430

Following gene: 17231436

Centisome position: 74.24

GC content: 44.98

Gene sequence:

>687_bases
ATGCACATTATGGAGGGCTATCTACCAGCAGGGTGGGCAGCTTTTTGGTGGTTAGTAGCTTTGCCGTTTATGCTTCTAGG
AGTGCGATCGCTCACCCGCATCACCAAAGCCAACCCAGAACTAAAATTATTGTTAGCATTGGCAGGGGCTTTTACTTTCG
TATTATCGGCCTTGAAATTGCCCTCAGTAACGGGTAGTTGTTCTCACCCGACAGGTACAGGCTTAGGGTCCGTGCTATTC
GGGCCTTTGGCGATGTCTGTGTTGGGTAGTTTAGTATTGTTGTTTCAAGCATTGCTACTGGCGCATGGTGGTTTAACAAC
TTTGGGTGCAAATGCTTTTTCAATGGCGATCGCGGGGCCATTTGCAGCCTATTGGATATATCATCTGACAATCAAGTTAA
CTGGCAAGCAAAGAATTGCCATCTTTTTAGCAGCCACCTTAGCAGATTTGCTAACCTACATTATTACTTCCGTCCAACTA
GCCTTAGCTTTTCCCGCACCAGTCGGCGGATTTATCGCCTCATTCGCCAAATTTGCTGGTATTTTCGCCATTACCCAAAT
CCCTTTAGCCATTAGTGAAGGATTATTAACTGTCTTGGTATGGAACTGGCTACAATCCTACTCACCGCAAGAACTCCAAT
TATTGAAATTAATCCAAGGGGAATCTCAAAGCCATGAATCAATCTAA

Upstream 100 bases:

>100_bases
TGTGCTGAGAAGGGTTCTCGCATCGAAACGTGCCTCCCTAATTCTCATGGGGATGCTGAGCTTTTATATAATTGTTAGTG
CATCTGCGCCAGCTTATGCC

Downstream 100 bases:

>100_bases
ACAAAGCCTCAGTAATTGGCTATTGATAGGCGGAGTCATCGCTTTAGCCGTTTTACCTTTAATATTTGTGCGGGATGCAG
AATTTACAGGTGCAGATAGC

Product: cobalt transport protein CbiM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MHIMEGYLPAGWAAFWWLVALPFMLLGVRSLTRITKANPELKLLLALAGAFTFVLSALKLPSVTGSCSHPTGTGLGSVLF
GPLAMSVLGSLVLLFQALLLAHGGLTTLGANAFSMAIAGPFAAYWIYHLTIKLTGKQRIAIFLAATLADLLTYIITSVQL
ALAFPAPVGGFIASFAKFAGIFAITQIPLAISEGLLTVLVWNWLQSYSPQELQLLKLIQGESQSHESI

Sequences:

>Translated_228_residues
MHIMEGYLPAGWAAFWWLVALPFMLLGVRSLTRITKANPELKLLLALAGAFTFVLSALKLPSVTGSCSHPTGTGLGSVLF
GPLAMSVLGSLVLLFQALLLAHGGLTTLGANAFSMAIAGPFAAYWIYHLTIKLTGKQRIAIFLAATLADLLTYIITSVQL
ALAFPAPVGGFIASFAKFAGIFAITQIPLAISEGLLTVLVWNWLQSYSPQELQLLKLIQGESQSHESI
>Mature_228_residues
MHIMEGYLPAGWAAFWWLVALPFMLLGVRSLTRITKANPELKLLLALAGAFTFVLSALKLPSVTGSCSHPTGTGLGSVLF
GPLAMSVLGSLVLLFQALLLAHGGLTTLGANAFSMAIAGPFAAYWIYHLTIKLTGKQRIAIFLAATLADLLTYIITSVQL
ALAFPAPVGGFIASFAKFAGIFAITQIPLAISEGLLTVLVWNWLQSYSPQELQLLKLIQGESQSHESI

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002751
- InterPro:   IPR018024 [H]

Pfam domain/function: PF01891 CbiM [H]

EC number: NA

Molecular weight: Translated: 24313; Mature: 24313

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIMEGYLPAGWAAFWWLVALPFMLLGVRSLTRITKANPELKLLLALAGAFTFVLSALKL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
PSVTGSCSHPTGTGLGSVLFGPLAMSVLGSLVLLFQALLLAHGGLTTLGANAFSMAIAGP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHH
FAAYWIYHLTIKLTGKQRIAIFLAATLADLLTYIITSVQLALAFPAPVGGFIASFAKFAG
HHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
IFAITQIPLAISEGLLTVLVWNWLQSYSPQELQLLKLIQGESQSHESI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MHIMEGYLPAGWAAFWWLVALPFMLLGVRSLTRITKANPELKLLLALAGAFTFVLSALKL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
PSVTGSCSHPTGTGLGSVLFGPLAMSVLGSLVLLFQALLLAHGGLTTLGANAFSMAIAGP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHH
FAAYWIYHLTIKLTGKQRIAIFLAATLADLLTYIITSVQLALAFPAPVGGFIASFAKFAG
HHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
IFAITQIPLAISEGLLTVLVWNWLQSYSPQELQLLKLIQGESQSHESI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8501034; 11677609 [H]