| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231407
Identifier: 17231407
GI number: 17231407
Start: 4720025
End: 4721896
Strand: Direct
Name: 17231407
Synonym: alr3915
Alternate gene names: NA
Gene position: 4720025-4721896 (Clockwise)
Preceding gene: 17231404
Following gene: 17231409
Centisome position: 73.59
GC content: 41.03
Gene sequence:
>1872_bases ATGGTTGGTTACACTGTGCATCTGTATTCAACAAACAAACACCCTTCTTTTTCGGTTCTCACCGATACAGGAAATAGTCT AGAAGACCAGCAGGAAGACTCTATGAGAGTAGCAGTCCAGCAGGAAGATTTACAGCTATTAAGCAGAACTTTGCAAGAAC AATTTCTTGCCGAAGTTCCCTCTGGCGAATTTTTCCAGATTAAGTGTGCGGTCAACAAAGATGAGTTAATGATCCTAACT CAACATCCAGTTAGCGTAAAAGTTAATACAGAGGAAATTTTTGCAGTACTTGAGGAAGCACTGCAATCATTACCACCTTA TCAGGATCAGCAAGTCCAATGTTTTCTGAGAATTGTGGGGGAAAAACTCCCTTACGCTAAACGTTCCCTGACTATGAAGG GATACGGAAAGACGGAAAGCCCTATCATTCAACAAGATGATGAAGACCAGGAAGACGAGGAAGCAACGTCGTTTTCATCG TTGGCATTACCTTTAAGTCATTCAACTGCAACAGATGCCGTCGAATATGAAGAAGGAGTATTTGACCCCTTAGCTGGTAC ACCAGATTTATTAACAAACCCGTCTCAGCGCCCTTTGAAAAAGATTCTGTTAGGGGCTGTGGTGGGAATTTCTCTCTTAG GTAGTGGTGGTGCTTACCTAGTAACTCGTCCTTGTGTGATGTCTGTGTGTCAAGAGTTCCAATCTGCCCAGCAACTCAAC ACTCAATTTAGGCAATTGATCAGTCGTGCCAGGTCAGAAAAAGATTTGACAACATTACAACAACAGCTAGAAACGACTAG CATAGCCTTAGGGGTAATCCCTCCTTGGTCATCTTATTCCCAACAAGCAGCAGAACTCAAAACTAATCTGTCTGGACGTT CCGAAAAAATTAGCCAAGTCAACAAAGCTTTGCAGGCGGCTTCAGTTGCAGAGCAAAAAATGCAAACTCCTGCTACTAGT CAAGACGAATTACAAGCTAGACAACAACTGTGGCGACAAGCGATAACGCCCCTGGAAGCAATCAGCCCTAATCATGAACT CTATAGACTGGTACAGCCAAAATTAATTAAATATCGGATTCATTTACAAACCATCAATCAGCAATTACTCGCTCAAGAAA AGTGGGTGAAAAAGTTAGCAGATGCTAAGGGCGTGGCCAGTGTAGCCAATAAGTGGGAAACAACAGCCAAATCTTTGAAA GATTGGCAAAGGGTGCAGTCTACTTGGCAAGTAGTAATTAATGCCTTGAATGTTATACCTCAGTCGAGTCCGGCATCTCA AGAGGCACAACAACTATTACTAGAATATAAACCTAAACTTGCAAGAGCGCGCGATCGCGTTACCATCGAACAACTAGCAG CTAAAAGCTACCAACAACTTCTTGGTATAGCCAGCCAAGCTAAAGCTTATGAGCAAAAACAAGAATGGCAGGCAGCTGTT ATTTATTGGCAACAAGCTTTACAGGCAGCTAAACAAATTTCTAACAATAGCTTGTATTACAATCAAGCTCAGAGTTTAAT CACACCATACTCAGCTTCCCTTCAACAGGCACAGGAAAAACTAATTTTAAATAATAGTTGGCAACAAACCCGTGCTGACT TAAATAAAACTTGTTCTAGTGAAATTAGGATTTGTAACTTTACCGTAGACGATAAAGGAATCATCGTCAAAATTACCCCT GAATATGAACAAGTACTACAAAGTAGTATTTCCGATAATAATGCTCAAGATTCTTCTCTTGCGGTTGGCATTACTAATCA TTGGCAAACCTTACAAGAAGCTTTAACAGTAATTAGCGAAAACGCCAACTTGCCTCTGTTTATTTATAATGTCCAAGATC AAGTAATTTATATGCGAACACCAGGGGAATAG
Upstream 100 bases:
>100_bases ATTCTCAAACACTAATAGCACTAAGTCCTGGAGGATTATTTTTCTTTTGGTGAAAACTCAGAAATTGTGTTAAAAAGTTG GTCTATCAGATATTACGGTT
Downstream 100 bases:
>100_bases CAGCTAGAGCGCCGTAGTAGTGCGGTGCTTAGGCTTTGCTAGTCCCCAGTCTCCTAATCCTTGTCCCAACTTTTTAGGGC GGTGGTGGTGGTTCTGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 623; Mature: 623
Protein sequence:
>623_residues MVGYTVHLYSTNKHPSFSVLTDTGNSLEDQQEDSMRVAVQQEDLQLLSRTLQEQFLAEVPSGEFFQIKCAVNKDELMILT QHPVSVKVNTEEIFAVLEEALQSLPPYQDQQVQCFLRIVGEKLPYAKRSLTMKGYGKTESPIIQQDDEDQEDEEATSFSS LALPLSHSTATDAVEYEEGVFDPLAGTPDLLTNPSQRPLKKILLGAVVGISLLGSGGAYLVTRPCVMSVCQEFQSAQQLN TQFRQLISRARSEKDLTTLQQQLETTSIALGVIPPWSSYSQQAAELKTNLSGRSEKISQVNKALQAASVAEQKMQTPATS QDELQARQQLWRQAITPLEAISPNHELYRLVQPKLIKYRIHLQTINQQLLAQEKWVKKLADAKGVASVANKWETTAKSLK DWQRVQSTWQVVINALNVIPQSSPASQEAQQLLLEYKPKLARARDRVTIEQLAAKSYQQLLGIASQAKAYEQKQEWQAAV IYWQQALQAAKQISNNSLYYNQAQSLITPYSASLQQAQEKLILNNSWQQTRADLNKTCSSEIRICNFTVDDKGIIVKITP EYEQVLQSSISDNNAQDSSLAVGITNHWQTLQEALTVISENANLPLFIYNVQDQVIYMRTPGE
Sequences:
>Translated_623_residues MVGYTVHLYSTNKHPSFSVLTDTGNSLEDQQEDSMRVAVQQEDLQLLSRTLQEQFLAEVPSGEFFQIKCAVNKDELMILT QHPVSVKVNTEEIFAVLEEALQSLPPYQDQQVQCFLRIVGEKLPYAKRSLTMKGYGKTESPIIQQDDEDQEDEEATSFSS LALPLSHSTATDAVEYEEGVFDPLAGTPDLLTNPSQRPLKKILLGAVVGISLLGSGGAYLVTRPCVMSVCQEFQSAQQLN TQFRQLISRARSEKDLTTLQQQLETTSIALGVIPPWSSYSQQAAELKTNLSGRSEKISQVNKALQAASVAEQKMQTPATS QDELQARQQLWRQAITPLEAISPNHELYRLVQPKLIKYRIHLQTINQQLLAQEKWVKKLADAKGVASVANKWETTAKSLK DWQRVQSTWQVVINALNVIPQSSPASQEAQQLLLEYKPKLARARDRVTIEQLAAKSYQQLLGIASQAKAYEQKQEWQAAV IYWQQALQAAKQISNNSLYYNQAQSLITPYSASLQQAQEKLILNNSWQQTRADLNKTCSSEIRICNFTVDDKGIIVKITP EYEQVLQSSISDNNAQDSSLAVGITNHWQTLQEALTVISENANLPLFIYNVQDQVIYMRTPGE >Mature_623_residues MVGYTVHLYSTNKHPSFSVLTDTGNSLEDQQEDSMRVAVQQEDLQLLSRTLQEQFLAEVPSGEFFQIKCAVNKDELMILT QHPVSVKVNTEEIFAVLEEALQSLPPYQDQQVQCFLRIVGEKLPYAKRSLTMKGYGKTESPIIQQDDEDQEDEEATSFSS LALPLSHSTATDAVEYEEGVFDPLAGTPDLLTNPSQRPLKKILLGAVVGISLLGSGGAYLVTRPCVMSVCQEFQSAQQLN TQFRQLISRARSEKDLTTLQQQLETTSIALGVIPPWSSYSQQAAELKTNLSGRSEKISQVNKALQAASVAEQKMQTPATS QDELQARQQLWRQAITPLEAISPNHELYRLVQPKLIKYRIHLQTINQQLLAQEKWVKKLADAKGVASVANKWETTAKSLK DWQRVQSTWQVVINALNVIPQSSPASQEAQQLLLEYKPKLARARDRVTIEQLAAKSYQQLLGIASQAKAYEQKQEWQAAV IYWQQALQAAKQISNNSLYYNQAQSLITPYSASLQQAQEKLILNNSWQQTRADLNKTCSSEIRICNFTVDDKGIIVKITP EYEQVLQSSISDNNAQDSSLAVGITNHWQTLQEALTVISENANLPLFIYNVQDQVIYMRTPGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69877; Mature: 69877
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGYTVHLYSTNKHPSFSVLTDTGNSLEDQQEDSMRVAVQQEDLQLLSRTLQEQFLAEVP CCCEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHCC SGEFFQIKCAVNKDELMILTQHPVSVKVNTEEIFAVLEEALQSLPPYQDQQVQCFLRIVG CCCEEEEEEEECCCCEEEEECCCEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH EKLPYAKRSLTMKGYGKTESPIIQQDDEDQEDEEATSFSSLALPLSHSTATDAVEYEEGV HHCCCHHHCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCHHCHHHHHCCC FDPLAGTPDLLTNPSQRPLKKILLGAVVGISLLGSGGAYLVTRPCVMSVCQEFQSAQQLN CCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHH TQFRQLISRARSEKDLTTLQQQLETTSIALGVIPPWSSYSQQAAELKTNLSGRSEKISQV HHHHHHHHHHCCCHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHH NKALQAASVAEQKMQTPATSQDELQARQQLWRQAITPLEAISPNHELYRLVQPKLIKYRI HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHCCHHHHHHH HLQTINQQLLAQEKWVKKLADAKGVASVANKWETTAKSLKDWQRVQSTWQVVINALNVIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QSSPASQEAQQLLLEYKPKLARARDRVTIEQLAAKSYQQLLGIASQAKAYEQKQEWQAAV CCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYWQQALQAAKQISNNSLYYNQAQSLITPYSASLQQAQEKLILNNSWQQTRADLNKTCSS HHHHHHHHHHHHHCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC EIRICNFTVDDKGIIVKITPEYEQVLQSSISDNNAQDSSLAVGITNHWQTLQEALTVISE CEEEEEEEECCCCEEEEECCHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHC NANLPLFIYNVQDQVIYMRTPGE CCCCCEEEEECCCCEEEEECCCC >Mature Secondary Structure MVGYTVHLYSTNKHPSFSVLTDTGNSLEDQQEDSMRVAVQQEDLQLLSRTLQEQFLAEVP CCCEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHCC SGEFFQIKCAVNKDELMILTQHPVSVKVNTEEIFAVLEEALQSLPPYQDQQVQCFLRIVG CCCEEEEEEEECCCCEEEEECCCEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH EKLPYAKRSLTMKGYGKTESPIIQQDDEDQEDEEATSFSSLALPLSHSTATDAVEYEEGV HHCCCHHHCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCHHCHHHHHCCC FDPLAGTPDLLTNPSQRPLKKILLGAVVGISLLGSGGAYLVTRPCVMSVCQEFQSAQQLN CCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHH TQFRQLISRARSEKDLTTLQQQLETTSIALGVIPPWSSYSQQAAELKTNLSGRSEKISQV HHHHHHHHHHCCCHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHH NKALQAASVAEQKMQTPATSQDELQARQQLWRQAITPLEAISPNHELYRLVQPKLIKYRI HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHCCHHHHHHH HLQTINQQLLAQEKWVKKLADAKGVASVANKWETTAKSLKDWQRVQSTWQVVINALNVIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QSSPASQEAQQLLLEYKPKLARARDRVTIEQLAAKSYQQLLGIASQAKAYEQKQEWQAAV CCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYWQQALQAAKQISNNSLYYNQAQSLITPYSASLQQAQEKLILNNSWQQTRADLNKTCSS HHHHHHHHHHHHHCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC EIRICNFTVDDKGIIVKITPEYEQVLQSSISDNNAQDSSLAVGITNHWQTLQEALTVISE CEEEEEEEECCCCEEEEECCHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHC NANLPLFIYNVQDQVIYMRTPGE CCCCCEEEEECCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA