Click here to switch to the map view.

The map label for this gene is 17231402

Identifier: 17231402

GI number: 17231402

Start: 4713185

End: 4713943

Strand: Direct

Name: 17231402

Synonym: alr3910

Alternate gene names: NA

Gene position: 4713185-4713943 (Clockwise)

Preceding gene: 17231399

Following gene: 17231403

Centisome position: 73.49

GC content: 39.0

Gene sequence:

>759_bases
ATGCCAGCCAATTTTCATAGCTCACCTCGTGTTGCATCAGCTAACACTAATTCCTACGTAAGTAAGTTATTGATACCACG
TTCCCAACGTCGGATATTCTTTCTGCAATTTACCTTGATGACTCTTATGGGCTGGGTTGTAGGTGGTATTGCTAGTATCG
CTTTAGAAAAAGTTCTCTGGGAAAGCCTACCGAATGCTTTTGCTTCTGCACCGGAAACTTGGAGTTTTTGGGTAAAATTA
CTAAGTAATGTTGTTTTTGCTGTAGTTTTTGCTGCCGATCAAGCTTTAGTTATCCGCCGTTATATTTCTGGACGCTTGTG
GCTGCTGGCTACCAGCATAGGTTGGTTGATTGCCCATAGTGTGGCGACTGGTTGGAATAATTATATTTCATCTATTGCAA
CTTCCCTCAAGGAAAGTTTAACCTTAGAAATAACCTTTATCTTGGCTTTTTTGTCAACATTTTTATACATTTTTTCCGGA
ATTTGGCTGGGATTGTTTCAATGGTTAGTTCTTCGACGCTATACGGCTAAATCTTGGTGGTGGTCTTTTTTCCCTTCCAT
TTCTTTCTTGTGTATCAGTGTGTTAGTTTGGTTGCTTTCTTTGGGGCAAAATTTATTTCCCGAAAATTACCGAACTCCTA
TATTGTATTGGAGTCAACAAGGATTTACCGCTATTATTCTAGGAATTATCCCGGCAATTGGCTTATGTAGTTTAAGAAGA
AAATCTCATCGGAAAATCGGAATTACTAGCTCATCTTAA

Upstream 100 bases:

>100_bases
TAAAAGGGAAATTCAGTAGTTGAGTTATAAATCTCTTTAGTCAAATTCTGTCCTCTGTCTTCTAGCTTCTGCCTTTTTTA
ATAGCTTTACTAAACTTAAT

Downstream 100 bases:

>100_bases
GTGGCTATTTGCTGGATCTAGAGTACAGGTTGCATATATGATGAATAAGGACAAGATTTCGCAAAATCAAATCACGCCAC
CCATTGCCGATAAACAGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MPANFHSSPRVASANTNSYVSKLLIPRSQRRIFFLQFTLMTLMGWVVGGIASIALEKVLWESLPNAFASAPETWSFWVKL
LSNVVFAVVFAADQALVIRRYISGRLWLLATSIGWLIAHSVATGWNNYISSIATSLKESLTLEITFILAFLSTFLYIFSG
IWLGLFQWLVLRRYTAKSWWWSFFPSISFLCISVLVWLLSLGQNLFPENYRTPILYWSQQGFTAIILGIIPAIGLCSLRR
KSHRKIGITSSS

Sequences:

>Translated_252_residues
MPANFHSSPRVASANTNSYVSKLLIPRSQRRIFFLQFTLMTLMGWVVGGIASIALEKVLWESLPNAFASAPETWSFWVKL
LSNVVFAVVFAADQALVIRRYISGRLWLLATSIGWLIAHSVATGWNNYISSIATSLKESLTLEITFILAFLSTFLYIFSG
IWLGLFQWLVLRRYTAKSWWWSFFPSISFLCISVLVWLLSLGQNLFPENYRTPILYWSQQGFTAIILGIIPAIGLCSLRR
KSHRKIGITSSS
>Mature_251_residues
PANFHSSPRVASANTNSYVSKLLIPRSQRRIFFLQFTLMTLMGWVVGGIASIALEKVLWESLPNAFASAPETWSFWVKLL
SNVVFAVVFAADQALVIRRYISGRLWLLATSIGWLIAHSVATGWNNYISSIATSLKESLTLEITFILAFLSTFLYIFSGI
WLGLFQWLVLRRYTAKSWWWSFFPSISFLCISVLVWLLSLGQNLFPENYRTPILYWSQQGFTAIILGIIPAIGLCSLRRK
SHRKIGITSSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28572; Mature: 28441

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPANFHSSPRVASANTNSYVSKLLIPRSQRRIFFLQFTLMTLMGWVVGGIASIALEKVLW
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESLPNAFASAPETWSFWVKLLSNVVFAVVFAADQALVIRRYISGRLWLLATSIGWLIAHS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
VATGWNNYISSIATSLKESLTLEITFILAFLSTFLYIFSGIWLGLFQWLVLRRYTAKSWW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WSFFPSISFLCISVLVWLLSLGQNLFPENYRTPILYWSQQGFTAIILGIIPAIGLCSLRR
HHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH
KSHRKIGITSSS
HCCCCCCCCCCC
>Mature Secondary Structure 
PANFHSSPRVASANTNSYVSKLLIPRSQRRIFFLQFTLMTLMGWVVGGIASIALEKVLW
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESLPNAFASAPETWSFWVKLLSNVVFAVVFAADQALVIRRYISGRLWLLATSIGWLIAHS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
VATGWNNYISSIATSLKESLTLEITFILAFLSTFLYIFSGIWLGLFQWLVLRRYTAKSWW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WSFFPSISFLCISVLVWLLSLGQNLFPENYRTPILYWSQQGFTAIILGIIPAIGLCSLRR
HHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH
KSHRKIGITSSS
HCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA