| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is ytfG [C]
Identifier: 17231400
GI number: 17231400
Start: 4710659
End: 4711618
Strand: Reverse
Name: ytfG [C]
Synonym: all3908
Alternate gene names: 17231400
Gene position: 4711618-4710659 (Counterclockwise)
Preceding gene: 17231401
Following gene: 17231395
Centisome position: 73.46
GC content: 37.29
Gene sequence:
>960_bases ATGACCAAAAAAAGAATTTTTGTGACCGGTGCTAGTGGCTGCATAGGTCATTATATTAGCGAAACCTTAATTCAAGAAAC CGATTACGAACTATATTTACTAGTTAGAAACCCCAGTAAATTACAAGTTGATACTCAGGTTCGTCCGGGTGTCACCGTCT TACAGGGTGATATGCAAAATATTAGTCAATTTGCTGATTTATTATCCACAATTGATATAGCCATCCTCACCGCAACCGCT TGGGGTGGTGAGCAAACCTTTGATATTAATGTATCTAAAACTATAGAGTTACTTAATCTATTAGACCCTGACCGTTGTCA ACAAGTTATTTATTTTTCTACAGCCAGCGTTTTAGATAGTCAAAATCAGCCACTTAAAGAAGCAGGGGAAATCGGCACAG ATTATATTCGTTCTAAATATGAATGCTTACATAAAATATCAGAATTAGGTATTGCCTCTAAAATCACCACAGTTTTTCCC ACATTAGTGTTAGGTGGTGATAGCAAAAAACCTTATTCTCATCTCACATCAGGTATCCCCGAAGTTACCAAGTATGTTAA TTTAATTCGCTTTTTACAAGCTGATGGTAGTTTCCACTTCATCCACGGCAAAGATATTGCCAGCGTAGTTAAATATTTAA TAGCCAATCCTCCTCAAGAAAATACATCACGTAGATTAGTATTAGGTCAAAAGCGTTTAACTGCTAACCAAGCAATAGAA CAACTTTGCTCCTATCTAGGCAAAAAGATTTCCTTCCGTATCCCCCTATCTTTATCATTGGCAAATCTCATCATTGCCGT CTTTCGCATTCAGATGGCAGATTGGGATAGATTCTGTATGAACTATCGCCATTTCACATACAACACTGTGATTAATCCCG ATAGTTTTGGCTTGCCAAATTACTGTGCAACTATGACTGATGTTCTAAAAATTAGCGGTGTTGATGCTTCTCACCAGTAA
Upstream 100 bases:
>100_bases TTGCGGTATGCGTCTCTGCGTGAATAAATCATACTTAGGAACTTAGCGTATTTATTAGTTGTCAATTTATCACTACAACT AATAACCAAACTGCAAACAC
Downstream 100 bases:
>100_bases TTCTCAATCTATGCAAAAATTGGCTGTAAATTTAAAATAAAACCAGGAAGAACATTTTCCCCAGATAAACTTATAGGAGA TTGTAATACTTCTGGTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase; NmrA Family Protein; NAD Dependent Epimerase/Dehydratase Family; Nucleoside-Diphosphate-Sugar Epimerases
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MTKKRIFVTGASGCIGHYISETLIQETDYELYLLVRNPSKLQVDTQVRPGVTVLQGDMQNISQFADLLSTIDIAILTATA WGGEQTFDINVSKTIELLNLLDPDRCQQVIYFSTASVLDSQNQPLKEAGEIGTDYIRSKYECLHKISELGIASKITTVFP TLVLGGDSKKPYSHLTSGIPEVTKYVNLIRFLQADGSFHFIHGKDIASVVKYLIANPPQENTSRRLVLGQKRLTANQAIE QLCSYLGKKISFRIPLSLSLANLIIAVFRIQMADWDRFCMNYRHFTYNTVINPDSFGLPNYCATMTDVLKISGVDASHQ
Sequences:
>Translated_319_residues MTKKRIFVTGASGCIGHYISETLIQETDYELYLLVRNPSKLQVDTQVRPGVTVLQGDMQNISQFADLLSTIDIAILTATA WGGEQTFDINVSKTIELLNLLDPDRCQQVIYFSTASVLDSQNQPLKEAGEIGTDYIRSKYECLHKISELGIASKITTVFP TLVLGGDSKKPYSHLTSGIPEVTKYVNLIRFLQADGSFHFIHGKDIASVVKYLIANPPQENTSRRLVLGQKRLTANQAIE QLCSYLGKKISFRIPLSLSLANLIIAVFRIQMADWDRFCMNYRHFTYNTVINPDSFGLPNYCATMTDVLKISGVDASHQ >Mature_318_residues TKKRIFVTGASGCIGHYISETLIQETDYELYLLVRNPSKLQVDTQVRPGVTVLQGDMQNISQFADLLSTIDIAILTATAW GGEQTFDINVSKTIELLNLLDPDRCQQVIYFSTASVLDSQNQPLKEAGEIGTDYIRSKYECLHKISELGIASKITTVFPT LVLGGDSKKPYSHLTSGIPEVTKYVNLIRFLQADGSFHFIHGKDIASVVKYLIANPPQENTSRRLVLGQKRLTANQAIEQ LCSYLGKKISFRIPLSLSLANLIIAVFRIQMADWDRFCMNYRHFTYNTVINPDSFGLPNYCATMTDVLKISGVDASHQ
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35638; Mature: 35507
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKRIFVTGASGCIGHYISETLIQETDYELYLLVRNPSKLQVDTQVRPGVTVLQGDMQN CCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCCCCEEECCCHHH ISQFADLLSTIDIAILTATAWGGEQTFDINVSKTIELLNLLDPDRCQQVIYFSTASVLDS HHHHHHHHHHHHHHEEEEECCCCCEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC QNQPLKEAGEIGTDYIRSKYECLHKISELGIASKITTVFPTLVLGGDSKKPYSHLTSGIP CCCCHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCCCHHHHHCCHH EVTKYVNLIRFLQADGSFHFIHGKDIASVVKYLIANPPQENTSRRLVLGQKRLTANQAIE HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHH QLCSYLGKKISFRIPLSLSLANLIIAVFRIQMADWDRFCMNYRHFTYNTVINPDSFGLPN HHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEEEEEEECCCCCCCCH YCATMTDVLKISGVDASHQ HHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TKKRIFVTGASGCIGHYISETLIQETDYELYLLVRNPSKLQVDTQVRPGVTVLQGDMQN CCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCCCCEEECCCHHH ISQFADLLSTIDIAILTATAWGGEQTFDINVSKTIELLNLLDPDRCQQVIYFSTASVLDS HHHHHHHHHHHHHHEEEEECCCCCEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC QNQPLKEAGEIGTDYIRSKYECLHKISELGIASKITTVFPTLVLGGDSKKPYSHLTSGIP CCCCHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCCCHHHHHCCHH EVTKYVNLIRFLQADGSFHFIHGKDIASVVKYLIANPPQENTSRRLVLGQKRLTANQAIE HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHH QLCSYLGKKISFRIPLSLSLANLIIAVFRIQMADWDRFCMNYRHFTYNTVINPDSFGLPN HHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEEEEEEECCCCCCCCH YCATMTDVLKISGVDASHQ HHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA