| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is cdsA [H]
Identifier: 17231367
GI number: 17231367
Start: 4675268
End: 4676152
Strand: Reverse
Name: cdsA [H]
Synonym: all3875
Alternate gene names: 17231367
Gene position: 4676152-4675268 (Counterclockwise)
Preceding gene: 161353741
Following gene: 17231365
Centisome position: 72.91
GC content: 43.39
Gene sequence:
>885_bases ATGCCTTGGTCTCGGATTATTAGTGGAATTGTTGCGATCGCCCTTGCTTTAGTTGCTGTCCTGTTGGGGGGTTGGTATTT TACCATCATGCTGGCGATCGTTGTTTTCTTAGGACAACAGGAATATTTTGATTTAGTTCGCACTAGAGGCATTTTGCCAG CCGCGAAAACTACTTTATTCCTTAGTCAAGTTTTACTAGTTACTTGTACTTTGGACAGCAATTTAGTTGATGCTGTCATG CCCATTGCAGGTACATTTATTTGCTTTTATTTACTATTTCAACCGAAAATGGCCACAATCGCCGATGTTTCGGCATCGAT TATGGGACTATTTTATGTAGGGTACTTGCCGAGTTATTGGGTGCGGTTACGGTCAATTGGTAGCACGTCCATCAGTAATT TACCTTTAGGAGGCTACTGGCCAGGAAGTTTGACAGATATTCTCGAAGAAAGAAATTTTGCCTCTCTACCCCAAGGGTTC AAAATTACAGTGCTGACATTTCTGTGCATCTGGGCAGCAGACATCGGTGCATATACTATCGGTAAATTCTTTGGCAAAAC CCGCCTGTCTGATATCAGCCCGAAAAAAACAGTTGAAGGTGCTGTTTTTGGTATCAGTGCTAGTCTAGCCGTAGCCCTGG CTGGTGCTTTCTATCTTCACTTACCCCAATTTCTTTTGACTGGCACAATTTTAGGCTTACTAATTGGCTTGGCTAGTCTA TTAGGCGACCTCACCGAGTCAATGCTGAAGCGCGATGCTGGTGTGAAGGACTCCGGACAATTGATCCCCGGTCATGGTGG CATCTTAGATCGCACAGATAGTTATATCTTTACAGCTCCTTTGGTTTACTATTTCGTCACGCTCATTTTGCCATTACTTA GTTAA
Upstream 100 bases:
>100_bases GAGAGTAGGGGGAGCAAAAGAGAAAACTAATCCCCAACCCCCAGTACCCAACCCCCAGTACCCAACCCCCAGTACCCAGT ACCCAACCCCGAATACTTCT
Downstream 100 bases:
>100_bases TAGTCAGTTGTCAGTGGTCAGTTGTCATTCTTCTTTACTTCCCCTGATCCCCCTGCTCCCCTACCTCCTACCCACTCCAT CATCACGGATTAACGTTCAC
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MPWSRIISGIVAIALALVAVLLGGWYFTIMLAIVVFLGQQEYFDLVRTRGILPAAKTTLFLSQVLLVTCTLDSNLVDAVM PIAGTFICFYLLFQPKMATIADVSASIMGLFYVGYLPSYWVRLRSIGSTSISNLPLGGYWPGSLTDILEERNFASLPQGF KITVLTFLCIWAADIGAYTIGKFFGKTRLSDISPKKTVEGAVFGISASLAVALAGAFYLHLPQFLLTGTILGLLIGLASL LGDLTESMLKRDAGVKDSGQLIPGHGGILDRTDSYIFTAPLVYYFVTLILPLLS
Sequences:
>Translated_294_residues MPWSRIISGIVAIALALVAVLLGGWYFTIMLAIVVFLGQQEYFDLVRTRGILPAAKTTLFLSQVLLVTCTLDSNLVDAVM PIAGTFICFYLLFQPKMATIADVSASIMGLFYVGYLPSYWVRLRSIGSTSISNLPLGGYWPGSLTDILEERNFASLPQGF KITVLTFLCIWAADIGAYTIGKFFGKTRLSDISPKKTVEGAVFGISASLAVALAGAFYLHLPQFLLTGTILGLLIGLASL LGDLTESMLKRDAGVKDSGQLIPGHGGILDRTDSYIFTAPLVYYFVTLILPLLS >Mature_293_residues PWSRIISGIVAIALALVAVLLGGWYFTIMLAIVVFLGQQEYFDLVRTRGILPAAKTTLFLSQVLLVTCTLDSNLVDAVMP IAGTFICFYLLFQPKMATIADVSASIMGLFYVGYLPSYWVRLRSIGSTSISNLPLGGYWPGSLTDILEERNFASLPQGFK ITVLTFLCIWAADIGAYTIGKFFGKTRLSDISPKKTVEGAVFGISASLAVALAGAFYLHLPQFLLTGTILGLLIGLASLL GDLTESMLKRDAGVKDSGQLIPGHGGILDRTDSYIFTAPLVYYFVTLILPLLS
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=113, Percent_Identity=47.787610619469, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1787677, Length=117, Percent_Identity=46.1538461538462, Blast_Score=96, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 31785; Mature: 31654
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWSRIISGIVAIALALVAVLLGGWYFTIMLAIVVFLGQQEYFDLVRTRGILPAAKTTLF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHH LSQVLLVTCTLDSNLVDAVMPIAGTFICFYLLFQPKMATIADVSASIMGLFYVGYLPSYW HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH VRLRSIGSTSISNLPLGGYWPGSLTDILEERNFASLPQGFKITVLTFLCIWAADIGAYTI HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH GKFFGKTRLSDISPKKTVEGAVFGISASLAVALAGAFYLHLPQFLLTGTILGLLIGLASL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGDLTESMLKRDAGVKDSGQLIPGHGGILDRTDSYIFTAPLVYYFVTLILPLLS HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PWSRIISGIVAIALALVAVLLGGWYFTIMLAIVVFLGQQEYFDLVRTRGILPAAKTTLF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHH LSQVLLVTCTLDSNLVDAVMPIAGTFICFYLLFQPKMATIADVSASIMGLFYVGYLPSYW HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH VRLRSIGSTSISNLPLGGYWPGSLTDILEERNFASLPQGFKITVLTFLCIWAADIGAYTI HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH GKFFGKTRLSDISPKKTVEGAVFGISASLAVALAGAFYLHLPQFLLTGTILGLLIGLASL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGDLTESMLKRDAGVKDSGQLIPGHGGILDRTDSYIFTAPLVYYFVTLILPLLS HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]