| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231364
Identifier: 17231364
GI number: 17231364
Start: 4672522
End: 4673322
Strand: Reverse
Name: 17231364
Synonym: all3872
Alternate gene names: NA
Gene position: 4673322-4672522 (Counterclockwise)
Preceding gene: 17231365
Following gene: 17231362
Centisome position: 72.86
GC content: 41.45
Gene sequence:
>801_bases ATGAAATGGCTAAGAAGAAAGCAAGATGAGCAACCGCAACTTTCGTTAGACCAACAAAGAGCCGAAAAACTAGCCGAATT GGGCGCTCAATTATGGGCTTCCCGACAAGAAAAGGGTTTATCTCTGGAGGAAATGGTCGCCATCACTAGAATTCCTCGGC GATTGTTGCAAGCAATTGAAGAAGGTAATCTCAACGATTTACCAGAACCAATATATATTCAAGGTTTGATTAGACAATTT GCTGATGCACTTGGTTTTCATGGTGTGGAATTGTCTAGCCAATTCCCTGTTGTTTCTGAGCAAAAGAAACCTCAGTTTGT AGGCGAATCCAAATCAATGGGTTTATTACGGCCTATTCATCTTTACTTACTTTACATACTGGTTATTGTCTGCTCTGTTA GTGGTTTGTCGCAATTATTAAATAACGCTGCCCTGCGGGCAACCGATAATGAAAATACCCCACAGATTAATAAGGAAACA GTAGCCGATTCCCAACAGAAATTAATTAAAACTGAACCTGTAAGCGATCGCAGCAGTAGAGAGAAAAATCATCAATCAGT ACAGATTGGTGTCACTCTCAAAGCATCGTCGTGGATTCGCGTAGTAGCTGACGGTAAAACAGAATTTGAAGGGACATTAC CAGAAGGTTCTCATCGAGTTTGGAAAGCCCAAGAACAACTAACGGTAAAAACCAATAACGCTGGTGGTGTGCTGATGAGT GTCAATCAGCAAGCAGCCAAAAAAATGGGAGAACTAGGTGAAGAGGAAGAAATCAAAATTGCAGCTCAACCTGGATTGTA G
Upstream 100 bases:
>100_bases AATCCCCAACCCTAGAGATATTTAGTTATCAACTGTCAACTGTCAACTAACACTCAATCCTATTAAGAGATTCAGCTGAG GTAAGGAGTTTAGATAAGTC
Downstream 100 bases:
>100_bases AAGAGATATAGGGGTATGGGGGTATAGGGGTGTAGGTATTCAATCTACACCTCTACACCCTCAAACCCTAATTAGGAATT AGTTTCCCTATTTACCTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MKWLRRKQDEQPQLSLDQQRAEKLAELGAQLWASRQEKGLSLEEMVAITRIPRRLLQAIEEGNLNDLPEPIYIQGLIRQF ADALGFHGVELSSQFPVVSEQKKPQFVGESKSMGLLRPIHLYLLYILVIVCSVSGLSQLLNNAALRATDNENTPQINKET VADSQQKLIKTEPVSDRSSREKNHQSVQIGVTLKASSWIRVVADGKTEFEGTLPEGSHRVWKAQEQLTVKTNNAGGVLMS VNQQAAKKMGELGEEEEIKIAAQPGL
Sequences:
>Translated_266_residues MKWLRRKQDEQPQLSLDQQRAEKLAELGAQLWASRQEKGLSLEEMVAITRIPRRLLQAIEEGNLNDLPEPIYIQGLIRQF ADALGFHGVELSSQFPVVSEQKKPQFVGESKSMGLLRPIHLYLLYILVIVCSVSGLSQLLNNAALRATDNENTPQINKET VADSQQKLIKTEPVSDRSSREKNHQSVQIGVTLKASSWIRVVADGKTEFEGTLPEGSHRVWKAQEQLTVKTNNAGGVLMS VNQQAAKKMGELGEEEEIKIAAQPGL >Mature_266_residues MKWLRRKQDEQPQLSLDQQRAEKLAELGAQLWASRQEKGLSLEEMVAITRIPRRLLQAIEEGNLNDLPEPIYIQGLIRQF ADALGFHGVELSSQFPVVSEQKKPQFVGESKSMGLLRPIHLYLLYILVIVCSVSGLSQLLNNAALRATDNENTPQINKET VADSQQKLIKTEPVSDRSSREKNHQSVQIGVTLKASSWIRVVADGKTEFEGTLPEGSHRVWKAQEQLTVKTNNAGGVLMS VNQQAAKKMGELGEEEEIKIAAQPGL
Specific function: Unknown
COG id: COG1426
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29641; Mature: 29641
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWLRRKQDEQPQLSLDQQRAEKLAELGAQLWASRQEKGLSLEEMVAITRIPRRLLQAIE CCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH EGNLNDLPEPIYIQGLIRQFADALGFHGVELSSQFPVVSEQKKPQFVGESKSMGLLRPIH CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH LYLLYILVIVCSVSGLSQLLNNAALRATDNENTPQINKETVADSQQKLIKTEPVSDRSSR HHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHH EKNHQSVQIGVTLKASSWIRVVADGKTEFEGTLPEGSHRVWKAQEQLTVKTNNAGGVLMS HCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHCCEEEEEECCCCCEEEE VNQQAAKKMGELGEEEEIKIAAQPGL CCHHHHHHHHHCCCCCCEEEEECCCC >Mature Secondary Structure MKWLRRKQDEQPQLSLDQQRAEKLAELGAQLWASRQEKGLSLEEMVAITRIPRRLLQAIE CCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH EGNLNDLPEPIYIQGLIRQFADALGFHGVELSSQFPVVSEQKKPQFVGESKSMGLLRPIH CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH LYLLYILVIVCSVSGLSQLLNNAALRATDNENTPQINKETVADSQQKLIKTEPVSDRSSR HHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHH EKNHQSVQIGVTLKASSWIRVVADGKTEFEGTLPEGSHRVWKAQEQLTVKTNNAGGVLMS HCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHCCEEEEEECCCCCEEEE VNQQAAKKMGELGEEEEIKIAAQPGL CCHHHHHHHHHCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA