| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231331
Identifier: 17231331
GI number: 17231331
Start: 4639103
End: 4640419
Strand: Reverse
Name: 17231331
Synonym: all3839
Alternate gene names: NA
Gene position: 4640419-4639103 (Counterclockwise)
Preceding gene: 17231332
Following gene: 17231330
Centisome position: 72.35
GC content: 36.29
Gene sequence:
>1317_bases ATGTTATGTTGCCATAGTTTGTTTATGTCTAAGGAATTATTAAAATCTTTCCAGGAAGCTTATAGCAATCTCGAATTGTT TCCATTGATGGGAGAGAAATTAATGGAGCAGTTTCGTGTAGATTATGGTGATGATTTAATAGCAGATTTGCGGCAATTAG TTGAAGATAGCCCTAATGGTGATGGCAAGTTTGTATTTACTGGACATCGAGGATGTGGAAAGTCTTCTTTATTAGCCGAA TTTAGTAGACAAGTTCAGGATAATTTTTTTGTAGTTTTATTTTCTATTGCTGACACTATTGAAATGTCGGCTGTTAATCA TGTCAATATTCTGTTTGCGATCGCTCTTAATTTAATGTACGAGGCAGAAGCACGCAAAGTACAAATTCCTCAAACTACTA AAGATAAACTTTATGGATGGTTTGCAACTCGTACTCGGACTACAGAGGCAGAGTTGGGAGGTGGGATTGAAGCTAGTGTT AATTTGCTCACTTTCCTGAAAGCTCAATTAAAGGCTGACGCAAAAGTTAGAGAGGAAATTACACAGGAATTTGAACGGAA AATATCAGATTTAGTTGCCCGAATTAATGAAATTGCTGCATTGATTCAATTTGCTACTAAACAAGAAGTTATAGTCATCA TTGATGATTTAGATAAACTAGATTTGGGAAGAGTTAATGATATTTATCGAGATAATATTAAAGCTCTGTTTCAACCTAAT TTTCGGATTATCTATACTATCCCTATTTCGGTAATGTGTGACACTTTTCTCTGGCCACTTATTGGTGCAGAAACTAATTA TCAAACTGTGGTGATGCCTGTTATCAAGATTTTTGCTAAGGGTGACAATCGTTTGCCTGATGCCCAGCCTCGAAGTGAAG CCAAAAATATTTTATGTGAAATCTTACAAAAACGCATTTCTAGTGAATTAATAGACAAATCAGCAGCAGAGAAGATTGTT GTTTACAGTGGTGGAGTGCTGCGTGAATTAATTCGTCTGGGTAATGTGTGTTGTCGCATTTGTTTGCGGCTTATCAGGCA GAAACCAGGAGAGAAAATTGTTATTAATGACCAAATTATAGAAGAAGCCATTAAGCAAATTCGTAATGATCTTTCTCTGC GTCTAGGAAGAGACGATTTTGAAATTTTGAAAACTACTTATGAGCAGTTCGAGCCGGAAGATGTACAGCAACAGGAGTTT TTAGAATTACTGCATGGGTTGTATGTTTTGGAATATCGTAATGATGAAACTTGGTATGATATTCACCCCATTCTTGTAGA GACTCTGAGACGCAGGGGGTTAATTAATGGTGAATGA
Upstream 100 bases:
>100_bases TGTTTTTTATACGCAAAGTGGCGCGGAGGTTGGCGCAGAGTTTCGCAGAGAATAGTTCTATTTTTGCGAGGATGGGTGAT GATATAAGTAAGTATGAAAA
Downstream 100 bases:
>100_bases AGACTTATTAGCAGATGGAGAAAATCGAGATGCTTATGATGATTTAATGGTTTCTATTGAGGCTAAAGCACATCGATTAA ATTTGCTAATTGCCGTTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MLCCHSLFMSKELLKSFQEAYSNLELFPLMGEKLMEQFRVDYGDDLIADLRQLVEDSPNGDGKFVFTGHRGCGKSSLLAE FSRQVQDNFFVVLFSIADTIEMSAVNHVNILFAIALNLMYEAEARKVQIPQTTKDKLYGWFATRTRTTEAELGGGIEASV NLLTFLKAQLKADAKVREEITQEFERKISDLVARINEIAALIQFATKQEVIVIIDDLDKLDLGRVNDIYRDNIKALFQPN FRIIYTIPISVMCDTFLWPLIGAETNYQTVVMPVIKIFAKGDNRLPDAQPRSEAKNILCEILQKRISSELIDKSAAEKIV VYSGGVLRELIRLGNVCCRICLRLIRQKPGEKIVINDQIIEEAIKQIRNDLSLRLGRDDFEILKTTYEQFEPEDVQQQEF LELLHGLYVLEYRNDETWYDIHPILVETLRRRGLINGE
Sequences:
>Translated_438_residues MLCCHSLFMSKELLKSFQEAYSNLELFPLMGEKLMEQFRVDYGDDLIADLRQLVEDSPNGDGKFVFTGHRGCGKSSLLAE FSRQVQDNFFVVLFSIADTIEMSAVNHVNILFAIALNLMYEAEARKVQIPQTTKDKLYGWFATRTRTTEAELGGGIEASV NLLTFLKAQLKADAKVREEITQEFERKISDLVARINEIAALIQFATKQEVIVIIDDLDKLDLGRVNDIYRDNIKALFQPN FRIIYTIPISVMCDTFLWPLIGAETNYQTVVMPVIKIFAKGDNRLPDAQPRSEAKNILCEILQKRISSELIDKSAAEKIV VYSGGVLRELIRLGNVCCRICLRLIRQKPGEKIVINDQIIEEAIKQIRNDLSLRLGRDDFEILKTTYEQFEPEDVQQQEF LELLHGLYVLEYRNDETWYDIHPILVETLRRRGLINGE >Mature_438_residues MLCCHSLFMSKELLKSFQEAYSNLELFPLMGEKLMEQFRVDYGDDLIADLRQLVEDSPNGDGKFVFTGHRGCGKSSLLAE FSRQVQDNFFVVLFSIADTIEMSAVNHVNILFAIALNLMYEAEARKVQIPQTTKDKLYGWFATRTRTTEAELGGGIEASV NLLTFLKAQLKADAKVREEITQEFERKISDLVARINEIAALIQFATKQEVIVIIDDLDKLDLGRVNDIYRDNIKALFQPN FRIIYTIPISVMCDTFLWPLIGAETNYQTVVMPVIKIFAKGDNRLPDAQPRSEAKNILCEILQKRISSELIDKSAAEKIV VYSGGVLRELIRLGNVCCRICLRLIRQKPGEKIVINDQIIEEAIKQIRNDLSLRLGRDDFEILKTTYEQFEPEDVQQQEF LELLHGLYVLEYRNDETWYDIHPILVETLRRRGLINGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50256; Mature: 50256
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCCHSLFMSKELLKSFQEAYSNLELFPLMGEKLMEQFRVDYGDDLIADLRQLVEDSPNG CCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC DGKFVFTGHRGCGKSSLLAEFSRQVQDNFFVVLFSIADTIEMSAVNHVNILFAIALNLMY CCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH EAEARKVQIPQTTKDKLYGWFATRTRTTEAELGGGIEASVNLLTFLKAQLKADAKVREEI HCCCCEEECCCCCHHHHHEEHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHH TQEFERKISDLVARINEIAALIQFATKQEVIVIIDDLDKLDLGRVNDIYRDNIKALFQPN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCC FRIIYTIPISVMCDTFLWPLIGAETNYQTVVMPVIKIFAKGDNRLPDAQPRSEAKNILCE CEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH ILQKRISSELIDKSAAEKIVVYSGGVLRELIRLGNVCCRICLRLIRQKPGEKIVINDQII HHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHH EEAIKQIRNDLSLRLGRDDFEILKTTYEQFEPEDVQQQEFLELLHGLYVLEYRNDETWYD HHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEEECCCCCEEE IHPILVETLRRRGLINGE HHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLCCHSLFMSKELLKSFQEAYSNLELFPLMGEKLMEQFRVDYGDDLIADLRQLVEDSPNG CCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC DGKFVFTGHRGCGKSSLLAEFSRQVQDNFFVVLFSIADTIEMSAVNHVNILFAIALNLMY CCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH EAEARKVQIPQTTKDKLYGWFATRTRTTEAELGGGIEASVNLLTFLKAQLKADAKVREEI HCCCCEEECCCCCHHHHHEEHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHH TQEFERKISDLVARINEIAALIQFATKQEVIVIIDDLDKLDLGRVNDIYRDNIKALFQPN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCC FRIIYTIPISVMCDTFLWPLIGAETNYQTVVMPVIKIFAKGDNRLPDAQPRSEAKNILCE CEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH ILQKRISSELIDKSAAEKIVVYSGGVLRELIRLGNVCCRICLRLIRQKPGEKIVINDQII HHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHH EEAIKQIRNDLSLRLGRDDFEILKTTYEQFEPEDVQQQEFLELLHGLYVLEYRNDETWYD HHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEEECCCCCEEE IHPILVETLRRRGLINGE HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA