| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231248
Identifier: 17231248
GI number: 17231248
Start: 4535050
End: 4537869
Strand: Direct
Name: 17231248
Synonym: alr3756
Alternate gene names: NA
Gene position: 4535050-4537869 (Clockwise)
Preceding gene: 17231247
Following gene: 17231249
Centisome position: 70.71
GC content: 46.35
Gene sequence:
>2820_bases ATGCTATACAAGCAACGCCAACAAAAGCTGTGGAAATGGATGGCATTGTTCCTAGTTGGGACATTGTTGCAGTTTTTGTT TTATGTTCCAGTACGCACCTTGGCAGAGAGTTCTAATGTTGCTGCTAATTCCGCCAGTTGTAGCAGTATTACATCTCCTC TCAGCCCTGAGGAACAAACTTATGCTCGTGCGGCTTGGCAATATTTTGTCAAAAACTATCAGCCAGCAACAGGATTTACT AATTCTACAGGGGGTTATCCTTCCGGTACGCTGTGGGATATGGGGAACTACTTAATGGCGTTGAATGCGGCGCGGTGGTT GAATCTCACCGATCAAGCAGACTTTGACGCTCGCCTGAATAAGTTTTTGACTGGTCTGGGAAATCTGAAGTTGTTTGAGG ATGCTTTACCTAATAAAGTCTACAACGCAGCCACCGGACAGATGGTAGATTACACTAATACTCCCATCGAACGGGGTATT GGCTGGTCGGCTTTAGATGTCGGTCGGATATTGGCGGCCTTTGATGTGATTCGCACTTGTCACCCTCAATATAATGATTG GCTCAAAGGGATTGTCACTAAGTGGCAAGTAGGGCGATCGCTTAAAGATGAACAACTGTTTGGCGCAACAGTCCTCCCGG ATAACACCACATTACTGGTACAAGAAGGACGACTCGGCTATGAAGAATACGCCGTTAGGGGTTATCAACTTTGGGGTTTT GCCGCACCAAAAGCTCTGGCATTAGAACCATATAAAATGGTGGAAATTAATGGTGTACAGATTCCTGTTGATACCCGTGA TTTCCAAAGCACCAATGCCAATAATTATGTTGTGAGTGAGTCTTATATTCTTGAGGGTATCGAATTTGGTTTTCAGGGAG AGTTAGGCGATTTTGCTGCTAGGGTTTTGGAGGTGCAGAAGCGGCGCTATGATGCGACAGGTCAGTTAACTGCGGTGACG GAAGACAACATCGACCAAGAACCTTATTTTCTTTACAACACTGTTTACGCCAACGGTAAAAACTGGGCAACTATCACCGA TACAAATCAACCTTACCCTCAGTTTCGTAGTGTTAGTAGCAAAGCGGCTTTTGGTTGGCGCTATCTTTTCCCAGATAATG CTTATGCACAAAAGATTTTTGATGCGGTAAAGGATCTCCGCAGTCCCGATGGCGGTGGTTTTTACGCTGGTATTTATGAG GAATCGAAACAGCCGAATAAAGCTTTAACTGGCAATACCAATGGGCTAATTTTGGAGATTTTATACTACAAAGCCAGAGG GAATCGTCCTTTAATTGGTTCGAGTGCTGTTAGTCAACCAAGCAAACCAACAAACAACAATACTTCCTCTGCTGCGACTC CCCCACCAAGAGAGACTCCCAAGGTGGCGCAAACATCTACAACCCCAACAAATTCTACCCCTCCCGCACCAGGAAATACT CCTCAGGTTGGGGAAGTGACGATCGCACCCATTCCCCCAGTGGGTAATCCAGACCCATCCTCTACCCTGAAACTCGCTCG ACCCCTAACGGTAGTGGAACGACGCTATGCAGAAGCAGCATGGAGGTATTTTCAAGCCAATTATCATGCTCGTAGTGGGT TAATCGACGATCGCAGTGATTTTCAGGGTGCTACTCTTTGGGGATTGGGAGATTATTTAGCTGCGCTTCATGCGGTGCGA TCGCTGGAGATTATTTCCCCGAAGGAATTTGACCAGCGTACCCGCCATTTATTAGCGGCCTTAGCTCAACTACCCTTATT TGCGGGAGAATTACCGAATCGAGGCTATGATACGCGAGTTCTCCAACCAATTGATTATGGTGGGAATCCTGTTCCCCAAG GTAACGGCTGGTCAGCTTTAGATGTTGGTAGGCTACTAGCAGCGCTGTATAACTTAAAAAGCTGTCACCCAGAATATACT CAAGCAGTTGATCAAATTGTTTTAGATTGGTCATACTTGCGGGTGGTGCGGGATGGAGTTCTTTCCAGCGCCACAGTTAC CCCAGGTAAGGAAGGACGATATCTTACCCGCGTTAATCTAGAAACCCGCTTGGGTTATGAAGAATACGCTGCTCGTGGTT TTCAACTATGGGGATTTGAGGTAGAGGGTTCGGCTGTTGGTGGTGAATATCAAACTACCCTGGTGGAAGGGGTAAAGGTT CCTACCCAACGCCACCGCACAGATACTAACTCCAAAGTTAACCAATATACAGTCAGTAATCCTTTCTTACTTTACGCCCT GGAATTTGGTTTAGATCCCCAAATGCGATCGCTCTTTGAGTCCATTTTCCAAGCACAGGCAGAGCGTTATCGCCGCACCG ATACCCTCACAGCCTCAGCTACCACTCTCATAGACCGCAAGCCTTACACCGTCCACAGCACGATTACTGGTAAGGGTGAA CCTTGGCAAACCTTAGGAGATGACGGAAAAACTGTACCTCAAGGGCGAATGGTAAGTACAGCAGTAGGTTTTGCTTATCA TGCACTCCTACCAGAAAATCAATATAGTCAAAAGTTATTTGCAGGAACCACAGACTTATATAACCCACTAGCAGGGTTTT ATGAGGGCTTTTATGAAACCACAGGTAAAACAGCCGTTGGTTTCACCAGCAGCACCAACAGCATGATTTTACAATCTTTA CTGTACAAGGTCACGAATCGCCAACCCTTAATTCGTCCATCAAGCGCCATGCAATCACCTTGGTGGCAAGCTGTGGCTCA AGGGGACTCCGGCCGAGGCTTACCGAGAATTGCTAAATCAAAAGTCAGATTAATTTCTGATAGTTATGGCAGTTATTGGA TGTCTGGTGCTTCCCAGTGA
Upstream 100 bases:
>100_bases ATCTAAATTCATGAGTCCCCGACTTCATGTTATTCGCTAATGCGATTCAATTCATTTCTACCGCAGTGCTATCAATGTAC TGATTTTTAACTCTCCGTAT
Downstream 100 bases:
>100_bases TGTAACAGGACTTGGGAGTCCTGTCTCCGACAAGAATTTTATTACCAGTGTCAAAATGACTTCTATTAATCATGATCCAA CTTTTTCTGGCAATAGTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 939; Mature: 939
Protein sequence:
>939_residues MLYKQRQQKLWKWMALFLVGTLLQFLFYVPVRTLAESSNVAANSASCSSITSPLSPEEQTYARAAWQYFVKNYQPATGFT NSTGGYPSGTLWDMGNYLMALNAARWLNLTDQADFDARLNKFLTGLGNLKLFEDALPNKVYNAATGQMVDYTNTPIERGI GWSALDVGRILAAFDVIRTCHPQYNDWLKGIVTKWQVGRSLKDEQLFGATVLPDNTTLLVQEGRLGYEEYAVRGYQLWGF AAPKALALEPYKMVEINGVQIPVDTRDFQSTNANNYVVSESYILEGIEFGFQGELGDFAARVLEVQKRRYDATGQLTAVT EDNIDQEPYFLYNTVYANGKNWATITDTNQPYPQFRSVSSKAAFGWRYLFPDNAYAQKIFDAVKDLRSPDGGGFYAGIYE ESKQPNKALTGNTNGLILEILYYKARGNRPLIGSSAVSQPSKPTNNNTSSAATPPPRETPKVAQTSTTPTNSTPPAPGNT PQVGEVTIAPIPPVGNPDPSSTLKLARPLTVVERRYAEAAWRYFQANYHARSGLIDDRSDFQGATLWGLGDYLAALHAVR SLEIISPKEFDQRTRHLLAALAQLPLFAGELPNRGYDTRVLQPIDYGGNPVPQGNGWSALDVGRLLAALYNLKSCHPEYT QAVDQIVLDWSYLRVVRDGVLSSATVTPGKEGRYLTRVNLETRLGYEEYAARGFQLWGFEVEGSAVGGEYQTTLVEGVKV PTQRHRTDTNSKVNQYTVSNPFLLYALEFGLDPQMRSLFESIFQAQAERYRRTDTLTASATTLIDRKPYTVHSTITGKGE PWQTLGDDGKTVPQGRMVSTAVGFAYHALLPENQYSQKLFAGTTDLYNPLAGFYEGFYETTGKTAVGFTSSTNSMILQSL LYKVTNRQPLIRPSSAMQSPWWQAVAQGDSGRGLPRIAKSKVRLISDSYGSYWMSGASQ
Sequences:
>Translated_939_residues MLYKQRQQKLWKWMALFLVGTLLQFLFYVPVRTLAESSNVAANSASCSSITSPLSPEEQTYARAAWQYFVKNYQPATGFT NSTGGYPSGTLWDMGNYLMALNAARWLNLTDQADFDARLNKFLTGLGNLKLFEDALPNKVYNAATGQMVDYTNTPIERGI GWSALDVGRILAAFDVIRTCHPQYNDWLKGIVTKWQVGRSLKDEQLFGATVLPDNTTLLVQEGRLGYEEYAVRGYQLWGF AAPKALALEPYKMVEINGVQIPVDTRDFQSTNANNYVVSESYILEGIEFGFQGELGDFAARVLEVQKRRYDATGQLTAVT EDNIDQEPYFLYNTVYANGKNWATITDTNQPYPQFRSVSSKAAFGWRYLFPDNAYAQKIFDAVKDLRSPDGGGFYAGIYE ESKQPNKALTGNTNGLILEILYYKARGNRPLIGSSAVSQPSKPTNNNTSSAATPPPRETPKVAQTSTTPTNSTPPAPGNT PQVGEVTIAPIPPVGNPDPSSTLKLARPLTVVERRYAEAAWRYFQANYHARSGLIDDRSDFQGATLWGLGDYLAALHAVR SLEIISPKEFDQRTRHLLAALAQLPLFAGELPNRGYDTRVLQPIDYGGNPVPQGNGWSALDVGRLLAALYNLKSCHPEYT QAVDQIVLDWSYLRVVRDGVLSSATVTPGKEGRYLTRVNLETRLGYEEYAARGFQLWGFEVEGSAVGGEYQTTLVEGVKV PTQRHRTDTNSKVNQYTVSNPFLLYALEFGLDPQMRSLFESIFQAQAERYRRTDTLTASATTLIDRKPYTVHSTITGKGE PWQTLGDDGKTVPQGRMVSTAVGFAYHALLPENQYSQKLFAGTTDLYNPLAGFYEGFYETTGKTAVGFTSSTNSMILQSL LYKVTNRQPLIRPSSAMQSPWWQAVAQGDSGRGLPRIAKSKVRLISDSYGSYWMSGASQ >Mature_939_residues MLYKQRQQKLWKWMALFLVGTLLQFLFYVPVRTLAESSNVAANSASCSSITSPLSPEEQTYARAAWQYFVKNYQPATGFT NSTGGYPSGTLWDMGNYLMALNAARWLNLTDQADFDARLNKFLTGLGNLKLFEDALPNKVYNAATGQMVDYTNTPIERGI GWSALDVGRILAAFDVIRTCHPQYNDWLKGIVTKWQVGRSLKDEQLFGATVLPDNTTLLVQEGRLGYEEYAVRGYQLWGF AAPKALALEPYKMVEINGVQIPVDTRDFQSTNANNYVVSESYILEGIEFGFQGELGDFAARVLEVQKRRYDATGQLTAVT EDNIDQEPYFLYNTVYANGKNWATITDTNQPYPQFRSVSSKAAFGWRYLFPDNAYAQKIFDAVKDLRSPDGGGFYAGIYE ESKQPNKALTGNTNGLILEILYYKARGNRPLIGSSAVSQPSKPTNNNTSSAATPPPRETPKVAQTSTTPTNSTPPAPGNT PQVGEVTIAPIPPVGNPDPSSTLKLARPLTVVERRYAEAAWRYFQANYHARSGLIDDRSDFQGATLWGLGDYLAALHAVR SLEIISPKEFDQRTRHLLAALAQLPLFAGELPNRGYDTRVLQPIDYGGNPVPQGNGWSALDVGRLLAALYNLKSCHPEYT QAVDQIVLDWSYLRVVRDGVLSSATVTPGKEGRYLTRVNLETRLGYEEYAARGFQLWGFEVEGSAVGGEYQTTLVEGVKV PTQRHRTDTNSKVNQYTVSNPFLLYALEFGLDPQMRSLFESIFQAQAERYRRTDTLTASATTLIDRKPYTVHSTITGKGE PWQTLGDDGKTVPQGRMVSTAVGFAYHALLPENQYSQKLFAGTTDLYNPLAGFYEGFYETTGKTAVGFTSSTNSMILQSL LYKVTNRQPLIRPSSAMQSPWWQAVAQGDSGRGLPRIAKSKVRLISDSYGSYWMSGASQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 104234; Mature: 104234
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYKQRQQKLWKWMALFLVGTLLQFLFYVPVRTLAESSNVAANSASCSSITSPLSPEEQT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCHHH YARAAWQYFVKNYQPATGFTNSTGGYPSGTLWDMGNYLMALNAARWLNLTDQADFDARLN HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH KFLTGLGNLKLFEDALPNKVYNAATGQMVDYTNTPIERGIGWSALDVGRILAAFDVIRTC HHHHCCCCCHHHHHHCCHHHHHCCCCCEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHHC HPQYNDWLKGIVTKWQVGRSLKDEQLFGATVLPDNTTLLVQEGRLGYEEYAVRGYQLWGF CCCHHHHHHHHHHHHHHCCCCCCCHHCCCEECCCCCEEEEECCCCCHHHHHHCCEEEEEE AAPKALALEPYKMVEINGVQIPVDTRDFQSTNANNYVVSESYILEGIEFGFQGELGDFAA CCCCCEECCCEEEEEECCEEECCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCHHHHHH RVLEVQKRRYDATGQLTAVTEDNIDQEPYFLYNTVYANGKNWATITDTNQPYPQFRSVSS HHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCEEEECCCCCCCHHHHCCCC KAAFGWRYLFPDNAYAQKIFDAVKDLRSPDGGGFYAGIYEESKQPNKALTGNTNGLILEI CCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEE LYYKARGNRPLIGSSAVSQPSKPTNNNTSSAATPPPRETPKVAQTSTTPTNSTPPAPGNT EEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PQVGEVTIAPIPPVGNPDPSSTLKLARPLTVVERRYAEAAWRYFQANYHARSGLIDDRSD CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCC FQGATLWGLGDYLAALHAVRSLEIISPKEFDQRTRHLLAALAQLPLFAGELPNRGYDTRV CCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCEE LQPIDYGGNPVPQGNGWSALDVGRLLAALYNLKSCHPEYTQAVDQIVLDWSYLRVVRDGV ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LSSATVTPGKEGRYLTRVNLETRLGYEEYAARGFQLWGFEVEGSAVGGEYQTTLVEGVKV HCCCCCCCCCCCCEEEEEEHHHHCCHHHHHHCCEEEEEEEECCCCCCCCHHHHHHHCCCC PTQRHRTDTNSKVNQYTVSNPFLLYALEFGLDPQMRSLFESIFQAQAERYRRTDTLTASA CHHHCCCCCCCCCCEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH TTLIDRKPYTVHSTITGKGEPWQTLGDDGKTVPQGRMVSTAVGFAYHALLPENQYSQKLF HHHCCCCCEEEEEEECCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH AGTTDLYNPLAGFYEGFYETTGKTAVGFTSSTNSMILQSLLYKVTNRQPLIRPSSAMQSP CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCH WWQAVAQGDSGRGLPRIAKSKVRLISDSYGSYWMSGASQ HHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCC >Mature Secondary Structure MLYKQRQQKLWKWMALFLVGTLLQFLFYVPVRTLAESSNVAANSASCSSITSPLSPEEQT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCHHH YARAAWQYFVKNYQPATGFTNSTGGYPSGTLWDMGNYLMALNAARWLNLTDQADFDARLN HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH KFLTGLGNLKLFEDALPNKVYNAATGQMVDYTNTPIERGIGWSALDVGRILAAFDVIRTC HHHHCCCCCHHHHHHCCHHHHHCCCCCEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHHC HPQYNDWLKGIVTKWQVGRSLKDEQLFGATVLPDNTTLLVQEGRLGYEEYAVRGYQLWGF CCCHHHHHHHHHHHHHHCCCCCCCHHCCCEECCCCCEEEEECCCCCHHHHHHCCEEEEEE AAPKALALEPYKMVEINGVQIPVDTRDFQSTNANNYVVSESYILEGIEFGFQGELGDFAA CCCCCEECCCEEEEEECCEEECCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCHHHHHH RVLEVQKRRYDATGQLTAVTEDNIDQEPYFLYNTVYANGKNWATITDTNQPYPQFRSVSS HHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCEEEECCCCCCCHHHHCCCC KAAFGWRYLFPDNAYAQKIFDAVKDLRSPDGGGFYAGIYEESKQPNKALTGNTNGLILEI CCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEE LYYKARGNRPLIGSSAVSQPSKPTNNNTSSAATPPPRETPKVAQTSTTPTNSTPPAPGNT EEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PQVGEVTIAPIPPVGNPDPSSTLKLARPLTVVERRYAEAAWRYFQANYHARSGLIDDRSD CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCC FQGATLWGLGDYLAALHAVRSLEIISPKEFDQRTRHLLAALAQLPLFAGELPNRGYDTRV CCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCEE LQPIDYGGNPVPQGNGWSALDVGRLLAALYNLKSCHPEYTQAVDQIVLDWSYLRVVRDGV ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LSSATVTPGKEGRYLTRVNLETRLGYEEYAARGFQLWGFEVEGSAVGGEYQTTLVEGVKV HCCCCCCCCCCCCEEEEEEHHHHCCHHHHHHCCEEEEEEEECCCCCCCCHHHHHHHCCCC PTQRHRTDTNSKVNQYTVSNPFLLYALEFGLDPQMRSLFESIFQAQAERYRRTDTLTASA CHHHCCCCCCCCCCEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH TTLIDRKPYTVHSTITGKGEPWQTLGDDGKTVPQGRMVSTAVGFAYHALLPENQYSQKLF HHHCCCCCEEEEEEECCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH AGTTDLYNPLAGFYEGFYETTGKTAVGFTSSTNSMILQSLLYKVTNRQPLIRPSSAMQSP CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCH WWQAVAQGDSGRGLPRIAKSKVRLISDSYGSYWMSGASQ HHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA