Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is ubiE [C]

Identifier: 17231242

GI number: 17231242

Start: 4527647

End: 4528270

Strand: Reverse

Name: ubiE [C]

Synonym: all3750

Alternate gene names: 17231242

Gene position: 4528270-4527647 (Counterclockwise)

Preceding gene: 17231245

Following gene: 17231240

Centisome position: 70.6

GC content: 38.3

Gene sequence:

>624_bases
ATGGCAACAATTTTCAGAGATTTAAGTTATCGCTACCAATGGCTCTATGATTCCATATCTCGTGTAGCTGCGCTCACTGT
GGGTGGAGAAGCTAGATTTCGGAAATTAGCTTTGCAAGGATTAACGATTCAGGCAAATACTTCTGTGTTAGATGTTTGTT
GTGGTAGTGGTCAAGCAACGCAATTATTAGTGAAATCTTCACAAAACGTAACAGGATTAGATGCTTCTCCCTTATCTTTG
CAACGGGCTAGACAAAATGTTCCAGAAGCTAATTATGTAGAAGCTTTTGCGGAGAAAATGCCATTTCCTGATAATCAGTT
TGATATAGTGCATACCAGTGCTGCTTTACATGAAATGGAACCGCAACAATTGCGAGAAATCATTCAAGAAGTTTATCGAG
TCTTAAAACCGGGAGGAGTGTTTACATTAGTAGATTTTCACACTCCTACTAATCCCATCTTCTGGCCTGGTTTAACAGTA
TTTTTACTGTTATTTGAGACGGAGACAGCTTGGCAATTATTAAAAACAGATTTAGCTGGGTTACTAACTGAAATTGGTTT
TGAAGCGGGTCAATCAATTTTATATGCGGGTGGTAGTTTACAGGTAATTCAAGCCAAGAAATAA

Upstream 100 bases:

>100_bases
GACCCATAGCAGTTATTTTCCCCCAACCTTTTCAGATTTTTTACTAATGTTAACAATATATCTTTATTAAATATAAAGCT
TAACAGTTAGGAATAGTACA

Downstream 100 bases:

>100_bases
ATTTGGCTTCTCCCAATTCAAAATTCAGACGTAGGTTGGGTGAAGGCTTTGCTTAAACCAACACCCTCATATGTTTTGGG
TTGCGCTACGCTCCACCCAA

Product: methyltransferase

Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MATIFRDLSYRYQWLYDSISRVAALTVGGEARFRKLALQGLTIQANTSVLDVCCGSGQATQLLVKSSQNVTGLDASPLSL
QRARQNVPEANYVEAFAEKMPFPDNQFDIVHTSAALHEMEPQQLREIIQEVYRVLKPGGVFTLVDFHTPTNPIFWPGLTV
FLLLFETETAWQLLKTDLAGLLTEIGFEAGQSILYAGGSLQVIQAKK

Sequences:

>Translated_207_residues
MATIFRDLSYRYQWLYDSISRVAALTVGGEARFRKLALQGLTIQANTSVLDVCCGSGQATQLLVKSSQNVTGLDASPLSL
QRARQNVPEANYVEAFAEKMPFPDNQFDIVHTSAALHEMEPQQLREIIQEVYRVLKPGGVFTLVDFHTPTNPIFWPGLTV
FLLLFETETAWQLLKTDLAGLLTEIGFEAGQSILYAGGSLQVIQAKK
>Mature_206_residues
ATIFRDLSYRYQWLYDSISRVAALTVGGEARFRKLALQGLTIQANTSVLDVCCGSGQATQLLVKSSQNVTGLDASPLSLQ
RARQNVPEANYVEAFAEKMPFPDNQFDIVHTSAALHEMEPQQLREIIQEVYRVLKPGGVFTLVDFHTPTNPIFWPGLTVF
LLLFETETAWQLLKTDLAGLLTEIGFEAGQSILYAGGSLQVIQAKK

Specific function: Methyltransferase Required For The Conversion Of Dimethylmenaquinone (Dmkh2) To Menaquinone (Mkh2) And The Conversion Of 2-Polyprenyl-6-Methoxy-1,4-Benzoquinol (Ddmqh2) To 2-Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol (Dmqh2). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 22953; Mature: 22821

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATIFRDLSYRYQWLYDSISRVAALTVGGEARFRKLALQGLTIQANTSVLDVCCGSGQAT
CCHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHCEEEEECCCEEEEECCCCCHH
QLLVKSSQNVTGLDASPLSLQRARQNVPEANYVEAFAEKMPFPDNQFDIVHTSAALHEME
HHEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCC
PQQLREIIQEVYRVLKPGGVFTLVDFHTPTNPIFWPGLTVFLLLFETETAWQLLKTDLAG
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
LLTEIGFEAGQSILYAGGSLQVIQAKK
HHHHHHHHHCCEEEEECCCEEEEEECC
>Mature Secondary Structure 
ATIFRDLSYRYQWLYDSISRVAALTVGGEARFRKLALQGLTIQANTSVLDVCCGSGQAT
CHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHCEEEEECCCEEEEECCCCCHH
QLLVKSSQNVTGLDASPLSLQRARQNVPEANYVEAFAEKMPFPDNQFDIVHTSAALHEME
HHEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCC
PQQLREIIQEVYRVLKPGGVFTLVDFHTPTNPIFWPGLTVFLLLFETETAWQLLKTDLAG
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
LLTEIGFEAGQSILYAGGSLQVIQAKK
HHHHHHHHHCCEEEEECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]

Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]

General reaction: Transferring one-carbon groups; Methyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]