| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231222
Identifier: 17231222
GI number: 17231222
Start: 4502411
End: 4503793
Strand: Direct
Name: 17231222
Synonym: alr3730
Alternate gene names: NA
Gene position: 4502411-4503793 (Clockwise)
Preceding gene: 17231221
Following gene: 17231223
Centisome position: 70.2
GC content: 44.11
Gene sequence:
>1383_bases ATGCTGCTCACCATCACCACCACCCACTCCCCAGCAACAGAGTTAGGCTACTTACTACATAAACACCCAGACCGTTGTCA CTCGTTTTCCCTGTCATTTGGAAAGGCGCACATTTTTTATCCAGAAGCGAGTGAACAAAAATGCACAGTGGCGCTGTTGT TGGATGTTGACCCGGTGAAGTTGGTGCGGGGGAGAGGTGCGACTTTGGAACAATATGTGAGCGATCGCCCTTATGTGGCA TCATCTTTTATGAGTGTAGCGATCGCACAGGTATTTAGTACAGCTTTAGGTGGACGCAGCAAAGACCGACCAGAATTAGC CCAAACGCCTCTACCTTTGGTGGCGAAACTATCGGTTTTACCCTGTCGTGGTGGTGAAAGTTTTCTTCGAGAATTATTTG AACCTTTGGGTTACACTGTCAGCGCCCAAGGTCACGTTTTAGATGAGAACTTTCCAGATTGGGGTAATAGTCGATATTTT ACCGTTGAACTCCAGCACACTATACCCTTGAGTGATTTGTTAAGCCATCTCTACGTCCTGATTCCCGTACTAGATGATGA GAAACACTATTGGGTAAACGAAGAAGAAATCGAAAAATTACTGCGTCATGGTGAGGGTTGGTTATCGCAACATCCAGCCA GAGAACAAATCACGCGACGTTATCTCAAACGACAACACCGTTTAACTCGCACTGCTTTAGCACAGTTAGCAGAAGAAGAT AATCTCGACCCTGATGGTACGGAAGAAACCCACGCAGAGGAAGAAGCGGCGGTAGAAAAGCCAATTAGCTTGAACCAACA GCGTATGAATGCGGTGGTTGCTGCTTTAAAACAAAGTAATGCTAGGCGTGTAATTGATTTGGGATGTGGACAAGGTAATT TATTGAAAATGCTCTTGAAAGATAGCTTTTTTGAGCAAATTACAGGTGTAGATGTTTCCTACAGGTCGCTAGAAATTGCC CAAGAAAGATTAGACCGCTTGCACCTTCCCCGCAACCAGTGGGAACGTTTGCAATTAATTCAAGGCGCATTGACTTATCA AGATAAACGCTTTTATGGTTATGATGCGGCGACTGTGGTAGAGGTAATTGAGCATCTTGATTTATCTCGATTGGGTGCCT TTGAGCGAGTTTTATTTGAATTTGCTCAACCAAAAACAGTGATAGTAACCACACCAAATATTGAATATAACGTCAAATTT GCCAATCTCCCGGCGGGGAAACTGCGACATAAAGATCATCGCTTTGAATGGACGCGATCGCAATTCCAAGATTGGGCAAA TAAAATCACAGAACGCTTTGCTTATAACGTGCAGTTTCAAGCTATAGGAGAAGAAGACCCAGAATTTGGTTCACCGACAC AAATGGCACGTTTTTGTCAATAA
Upstream 100 bases:
>100_bases GGCGATGTGCTGTTAGTGAGCATAACTGTTTACGAATTTTCAGTAATCGCTTACTGTGGAGCAGTATTTATTAGCTAATC ACTAACACTTAAATAAGTGA
Downstream 100 bases:
>100_bases GTAAGGGACTGGGGAGCAGGGGGAGAAAAGAACTGTTGACTGTTGACCAATGACTAATAACTATGAAAATTACTATTCCT GAATTATCTTTAGTTGTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Ubiquinone/Menaquinone Biosynthesis Methyltransferase UbiE; Methyltransferase; SAM-Dependent Methyltransferase; Methyltransferase Family Protein
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MLLTITTTHSPATELGYLLHKHPDRCHSFSLSFGKAHIFYPEASEQKCTVALLLDVDPVKLVRGRGATLEQYVSDRPYVA SSFMSVAIAQVFSTALGGRSKDRPELAQTPLPLVAKLSVLPCRGGESFLRELFEPLGYTVSAQGHVLDENFPDWGNSRYF TVELQHTIPLSDLLSHLYVLIPVLDDEKHYWVNEEEIEKLLRHGEGWLSQHPAREQITRRYLKRQHRLTRTALAQLAEED NLDPDGTEETHAEEEAAVEKPISLNQQRMNAVVAALKQSNARRVIDLGCGQGNLLKMLLKDSFFEQITGVDVSYRSLEIA QERLDRLHLPRNQWERLQLIQGALTYQDKRFYGYDAATVVEVIEHLDLSRLGAFERVLFEFAQPKTVIVTTPNIEYNVKF ANLPAGKLRHKDHRFEWTRSQFQDWANKITERFAYNVQFQAIGEEDPEFGSPTQMARFCQ
Sequences:
>Translated_460_residues MLLTITTTHSPATELGYLLHKHPDRCHSFSLSFGKAHIFYPEASEQKCTVALLLDVDPVKLVRGRGATLEQYVSDRPYVA SSFMSVAIAQVFSTALGGRSKDRPELAQTPLPLVAKLSVLPCRGGESFLRELFEPLGYTVSAQGHVLDENFPDWGNSRYF TVELQHTIPLSDLLSHLYVLIPVLDDEKHYWVNEEEIEKLLRHGEGWLSQHPAREQITRRYLKRQHRLTRTALAQLAEED NLDPDGTEETHAEEEAAVEKPISLNQQRMNAVVAALKQSNARRVIDLGCGQGNLLKMLLKDSFFEQITGVDVSYRSLEIA QERLDRLHLPRNQWERLQLIQGALTYQDKRFYGYDAATVVEVIEHLDLSRLGAFERVLFEFAQPKTVIVTTPNIEYNVKF ANLPAGKLRHKDHRFEWTRSQFQDWANKITERFAYNVQFQAIGEEDPEFGSPTQMARFCQ >Mature_460_residues MLLTITTTHSPATELGYLLHKHPDRCHSFSLSFGKAHIFYPEASEQKCTVALLLDVDPVKLVRGRGATLEQYVSDRPYVA SSFMSVAIAQVFSTALGGRSKDRPELAQTPLPLVAKLSVLPCRGGESFLRELFEPLGYTVSAQGHVLDENFPDWGNSRYF TVELQHTIPLSDLLSHLYVLIPVLDDEKHYWVNEEEIEKLLRHGEGWLSQHPAREQITRRYLKRQHRLTRTALAQLAEED NLDPDGTEETHAEEEAAVEKPISLNQQRMNAVVAALKQSNARRVIDLGCGQGNLLKMLLKDSFFEQITGVDVSYRSLEIA QERLDRLHLPRNQWERLQLIQGALTYQDKRFYGYDAATVVEVIEHLDLSRLGAFERVLFEFAQPKTVIVTTPNIEYNVKF ANLPAGKLRHKDHRFEWTRSQFQDWANKITERFAYNVQFQAIGEEDPEFGSPTQMARFCQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI156564367, Length=215, Percent_Identity=35.3488372093023, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI156564365, Length=215, Percent_Identity=35.3488372093023, Blast_Score=133, Evalue=3e-31, Organism=Caenorhabditis elegans, GI25151690, Length=178, Percent_Identity=32.0224719101124, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI25151692, Length=178, Percent_Identity=32.0224719101124, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI19922074, Length=211, Percent_Identity=27.4881516587678, Blast_Score=91, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52618; Mature: 52618
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLTITTTHSPATELGYLLHKHPDRCHSFSLSFGKAHIFYPEASEQKCTVALLLDVDPVK CEEEEEECCCCHHHHHHHHHCCCCHHHEEEEECCCEEEECCCCCCCCEEEEEEECCCHHH LVRGRGATLEQYVSDRPYVASSFMSVAIAQVFSTALGGRSKDRPELAQTPLPLVAKLSVL HHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHEEE PCRGGESFLRELFEPLGYTVSAQGHVLDENFPDWGNSRYFTVELQHTIPLSDLLSHLYVL ECCCCHHHHHHHHHHHCCEEECCCCEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHHEE IPVLDDEKHYWVNEEEIEKLLRHGEGWLSQHPAREQITRRYLKRQHRLTRTALAQLAEED EEEEECCCCCCCCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC NLDPDGTEETHAEEEAAVEKPISLNQQRMNAVVAALKQSNARRVIDLGCGQGNLLKMLLK CCCCCCCCHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH DSFFEQITGVDVSYRSLEIAQERLDRLHLPRNQWERLQLIQGALTYQDKRFYGYDAATVV HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEECCCHHHHH EVIEHLDLSRLGAFERVLFEFAQPKTVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRS HHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCHHHCCCCCCHHHHHH QFQDWANKITERFAYNVQFQAIGEEDPEFGSPTQMARFCQ HHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHCC >Mature Secondary Structure MLLTITTTHSPATELGYLLHKHPDRCHSFSLSFGKAHIFYPEASEQKCTVALLLDVDPVK CEEEEEECCCCHHHHHHHHHCCCCHHHEEEEECCCEEEECCCCCCCCEEEEEEECCCHHH LVRGRGATLEQYVSDRPYVASSFMSVAIAQVFSTALGGRSKDRPELAQTPLPLVAKLSVL HHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHEEE PCRGGESFLRELFEPLGYTVSAQGHVLDENFPDWGNSRYFTVELQHTIPLSDLLSHLYVL ECCCCHHHHHHHHHHHCCEEECCCCEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHHEE IPVLDDEKHYWVNEEEIEKLLRHGEGWLSQHPAREQITRRYLKRQHRLTRTALAQLAEED EEEEECCCCCCCCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC NLDPDGTEETHAEEEAAVEKPISLNQQRMNAVVAALKQSNARRVIDLGCGQGNLLKMLLK CCCCCCCCHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH DSFFEQITGVDVSYRSLEIAQERLDRLHLPRNQWERLQLIQGALTYQDKRFYGYDAATVV HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEECCCHHHHH EVIEHLDLSRLGAFERVLFEFAQPKTVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRS HHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCHHHCCCCCCHHHHHH QFQDWANKITERFAYNVQFQAIGEEDPEFGSPTQMARFCQ HHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA