| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231221
Identifier: 17231221
GI number: 17231221
Start: 4501881
End: 4502297
Strand: Direct
Name: 17231221
Synonym: alr3729
Alternate gene names: NA
Gene position: 4501881-4502297 (Clockwise)
Preceding gene: 17231219
Following gene: 17231222
Centisome position: 70.19
GC content: 39.57
Gene sequence:
>417_bases GTGAGTAACGCAAATACAGAGCTACTTTTGCAATGGGCAAATTTATGGTCTTCAGGAAATGTAGAATCGTTTCTCTCGCT TTTTGCTGAGGATTGCTACTACGAAGATGTGGCGTTTAGTATGGTGAGTAAAGGTAAGGAACAACTCAGAGACTTTTTCA GCGCTACTCGCACAGCATTACCTGATTTAAAGATAAATGTACAGTCTTGTTTTGCGTCAGAAGCCAATGGCGCATTAGAG TGGGTCATGCAAGGGACTCATAAGGAAGCATTTCATAATGTACCAGCTTCCCATCAAATGATTGAGGTGCGGGGCGTGAC ATTTATAAATCTAGAAAACGGAAAAATCAAAACTAATAAGGATTATTACAACCTTGCTACTTTATTACAGCAGATTGGAA TGTTACCACAGTTGTAA
Upstream 100 bases:
>100_bases TGATGTGTTCTTGTTTTTTTTCCATACGGCAGCGTATTGACATTTATTTGTTGAGCTATTAATCTATTTCCATACGCTAC GGTATGGAGAAGATAAATAA
Downstream 100 bases:
>100_bases CTAACGATGTTTGGGCGATGTGCTGTTAGTGAGCATAACTGTTTACGAATTTTCAGTAATCGCTTACTGTGGAGCAGTAT TTATTAGCTAATCACTAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MSNANTELLLQWANLWSSGNVESFLSLFAEDCYYEDVAFSMVSKGKEQLRDFFSATRTALPDLKINVQSCFASEANGALE WVMQGTHKEAFHNVPASHQMIEVRGVTFINLENGKIKTNKDYYNLATLLQQIGMLPQL
Sequences:
>Translated_138_residues MSNANTELLLQWANLWSSGNVESFLSLFAEDCYYEDVAFSMVSKGKEQLRDFFSATRTALPDLKINVQSCFASEANGALE WVMQGTHKEAFHNVPASHQMIEVRGVTFINLENGKIKTNKDYYNLATLLQQIGMLPQL >Mature_137_residues SNANTELLLQWANLWSSGNVESFLSLFAEDCYYEDVAFSMVSKGKEQLRDFFSATRTALPDLKINVQSCFASEANGALEW VMQGTHKEAFHNVPASHQMIEVRGVTFINLENGKIKTNKDYYNLATLLQQIGMLPQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15572; Mature: 15441
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNANTELLLQWANLWSSGNVESFLSLFAEDCYYEDVAFSMVSKGKEQLRDFFSATRTAL CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC PDLKINVQSCFASEANGALEWVMQGTHKEAFHNVPASHQMIEVRGVTFINLENGKIKTNK CCCEEHHHHHHCCCCCHHHHHHHCCHHHHHHHCCCCCCCEEEECCEEEEEECCCEEECCC DYYNLATLLQQIGMLPQL HHHHHHHHHHHHCCCCCC >Mature Secondary Structure SNANTELLLQWANLWSSGNVESFLSLFAEDCYYEDVAFSMVSKGKEQLRDFFSATRTAL CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC PDLKINVQSCFASEANGALEWVMQGTHKEAFHNVPASHQMIEVRGVTFINLENGKIKTNK CCCEEHHHHHHCCCCCHHHHHHHCCHHHHHHHCCCCCCCEEEECCEEEEEECCCEEECCC DYYNLATLLQQIGMLPQL HHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA