| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231133
Identifier: 17231133
GI number: 17231133
Start: 4392739
End: 4393260
Strand: Direct
Name: 17231133
Synonym: alr3641
Alternate gene names: NA
Gene position: 4392739-4393260 (Clockwise)
Preceding gene: 17231132
Following gene: 17231136
Centisome position: 68.49
GC content: 35.63
Gene sequence:
>522_bases GTGAGTGAAATATGCTATTACAGGAGTGTAAAAAGCCTTGCCATGTGGAAAGCGGGAACGCAACAGCAGGCAATACCATC TCCAGACCATGCTAATAGATATTTAAGAGACATCAAAGAGGGAAAAGGATTTCCCTCCTTATGGCTAGCATCATGTTCTG AAGATTTAGAAAAAATTGCGTTGGGAATGCTACTACTCAAAGGTCATCTTGATACTGTAAACTTTATAGGATTTAAAGAA TCTTGCTTTAGTAATGTAGGGTTAATAGTAAATCATGTCAAAGATACTAGTTTTCCTATCTCAGGAGTTGGTAATTTACA CTATGAACTTTGTACATCAGATGATACTCAATTAATACCTGCAATCGAATTATTCTTAAAAGGGAATGGTTTTTTTGAAG AATTTGTGAAATCTCAACCCGATAAGAACAATATGCGAAAAATAGCAGCAAGATACATTAATGAGGTAAATCAGCAGTAT CAAGCAAAGGCTATAGAGTGGGGTAAACAATACTTGGAGTGA
Upstream 100 bases:
>100_bases TGAAGTGCCAATAGCAGAAGAATTACTTGCAGAAGCCAAGAATTTACTTAAAAATGAAGAGAGTACATTTGTACGTGAAT ACCTGGAGTCATTATAAGGT
Downstream 100 bases:
>100_bases AAGTTAGTATTACTCTTAGTTCTAATAAAGTATTGATATTACTGAATTTTTATACTTGCTTTATACAAATTTTTAGTACT CCATTATCTTCACAAAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MSEICYYRSVKSLAMWKAGTQQQAIPSPDHANRYLRDIKEGKGFPSLWLASCSEDLEKIALGMLLLKGHLDTVNFIGFKE SCFSNVGLIVNHVKDTSFPISGVGNLHYELCTSDDTQLIPAIELFLKGNGFFEEFVKSQPDKNNMRKIAARYINEVNQQY QAKAIEWGKQYLE
Sequences:
>Translated_173_residues MSEICYYRSVKSLAMWKAGTQQQAIPSPDHANRYLRDIKEGKGFPSLWLASCSEDLEKIALGMLLLKGHLDTVNFIGFKE SCFSNVGLIVNHVKDTSFPISGVGNLHYELCTSDDTQLIPAIELFLKGNGFFEEFVKSQPDKNNMRKIAARYINEVNQQY QAKAIEWGKQYLE >Mature_172_residues SEICYYRSVKSLAMWKAGTQQQAIPSPDHANRYLRDIKEGKGFPSLWLASCSEDLEKIALGMLLLKGHLDTVNFIGFKES CFSNVGLIVNHVKDTSFPISGVGNLHYELCTSDDTQLIPAIELFLKGNGFFEEFVKSQPDKNNMRKIAARYINEVNQQYQ AKAIEWGKQYLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19631; Mature: 19499
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: PS00758 ARGE_DAPE_CPG2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEICYYRSVKSLAMWKAGTQQQAIPSPDHANRYLRDIKEGKGFPSLWLASCSEDLEKIA CCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LGMLLLKGHLDTVNFIGFKESCFSNVGLIVNHVKDTSFPISGVGNLHYELCTSDDTQLIP HHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHH AIELFLKGNGFFEEFVKSQPDKNNMRKIAARYINEVNQQYQAKAIEWGKQYLE HHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SEICYYRSVKSLAMWKAGTQQQAIPSPDHANRYLRDIKEGKGFPSLWLASCSEDLEKIA CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LGMLLLKGHLDTVNFIGFKESCFSNVGLIVNHVKDTSFPISGVGNLHYELCTSDDTQLIP HHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHH AIELFLKGNGFFEEFVKSQPDKNNMRKIAARYINEVNQQYQAKAIEWGKQYLE HHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA