| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231033
Identifier: 17231033
GI number: 17231033
Start: 4266255
End: 4267889
Strand: Reverse
Name: 17231033
Synonym: all3541
Alternate gene names: NA
Gene position: 4267889-4266255 (Counterclockwise)
Preceding gene: 17231034
Following gene: 17231032
Centisome position: 66.54
GC content: 41.59
Gene sequence:
>1635_bases ATGCGAGCCAATATTCTAGGTTTTGGTATTATTTTCTTGCTAAATGCTTGTGCTGCAAGCATTGAGAGCAATTCTCAAGC GGCAAATAGTATTAATCCCAAACCAGAAAAATGTCCCCAGGCGCAAGTTGTTTCCTTACCTGCATCCAATACAAATGAAG GCTTCTACGATAGGTTTGATTTTCACATCCGCAATATTGTAGCTGATGGTGATACAGTTAAGTTCCAGGCTTTAGAACAG GATTTTGTTTTCTGTCGCAGTAATAATAATTGGACAGTGCAATCTGGGACTTTGTCTAAGGAACTACAACCAGAAAATAA CTACGCGGACTTTGCACAAGAATTGGTAAATCCAAAATTTAAAAATATTGATTTCCAAGGTAAAACATATCAGTATCGAG TTGTTAGACAACCACAGTTCACCTTGGGAGAAAACAATAATATTTCTAGACCGGATGTAACAGACCCTGCAAAAGATGCG GTTGTATTTGAGTTAATTAACCCCAACGACAAAAATCCCCAAAGACAAACCTTATATACACTAAAAGACTTACAAGAAAT TGCAGTCAAAGCGGGGTATTCTGCCACAGGAAATCAATTGGGTTTCCCCCGAATTACATCTGCTAGTGTTCACAACGCGC GCATCTGGTGGTCAGTTGCTTTTGAACAAGGCGAAGGCAATAACGGTATTGCGACTATTGTCAGTTATGACCCTAAAACC GATAAATTTAACATCATTCAACCAGAATCACTCTGGTCTACTCAAATTACTGACTTAACAATTACTGGCGACGCTAATAA TCCTACATTCTGGATGGGTACTAATATTAGTGGTGAAGGAAATCTCTACATTCCTGCTCAAGGGTTGGTAGCTTATCGCC CAGATTCACAAAATCCCAATACAGGTTCTTTAACGGGTTACACTGTCAATAATAGCCCAATTGTCGGGGCAATTCCTGAC AAACTCAGATTAGAAAATGACAAACTTTGGGTTAGTACCGCCAACGGTGTTTGTCAAGTTAAGTGGGAAACTGCGGATAA TCCTGAAAGTTGGAATTGTTGGCGATTTGCCGCAATGGCTAAACTACCCCAGCAAATACCAATTTACAGCGCCTTGACCA ATAAAACACCAGTCGCTTCTCTATCTGGCGGGGATGATATAGAGGTTTTATGGTGGAGTCCCGTCAACTATCAGACTCAA AAGGGACGTTATGAAGTGAGATATACCCCAGGCTTCACTGTGGAGTTAAAAGAAGGCGCAAGTACTTATCAGTTTCCGCG TTCTCTACCACCAGGAAAAATATCCGTTGATTGGCCTGGTTTTGAGTGGAATTGGAACGGAGAACGTTTTGTACGCGGCT TTGATGAAGTTTCTCTGAATTTATCTGGTGGTGGCCCAAGGGGTATTGGTTCTGGTCAACTGCAACCGGAGGTTCCTATC AATTGGAATACCATGCGCGGTGATTTAGAATTACTCGACTTGTCTGCAAAATCTACCAAGGTAAAATATTACTCTGGTTG GGTAGATGATACTGCACTTAAGCCTTATCTTACGGTTATACCCCAAACTAGACCCCAAAACCCTCAACCAAACCCTTTGG CAGCAGTAGCCAAGCAACTACCATCACGTCAGTAA
Upstream 100 bases:
>100_bases ATAAATTTGTAAGCATAATTCAGAAAATTTATCAGGCGATCGCGTAGTTAATATTTAGGCTAATTAACAGCAAGAGTATG CAATTGCAGGGGGACAATTT
Downstream 100 bases:
>100_bases TCCGCGCTTATGAATGCTGAAACAATATCCAGGGTTCCTGTTGCATTAACCATTGCCGGTTCCGATAGCGGCGGTGGTGC GGGAATTCAAGCTGATTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 544; Mature: 544
Protein sequence:
>544_residues MRANILGFGIIFLLNACAASIESNSQAANSINPKPEKCPQAQVVSLPASNTNEGFYDRFDFHIRNIVADGDTVKFQALEQ DFVFCRSNNNWTVQSGTLSKELQPENNYADFAQELVNPKFKNIDFQGKTYQYRVVRQPQFTLGENNNISRPDVTDPAKDA VVFELINPNDKNPQRQTLYTLKDLQEIAVKAGYSATGNQLGFPRITSASVHNARIWWSVAFEQGEGNNGIATIVSYDPKT DKFNIIQPESLWSTQITDLTITGDANNPTFWMGTNISGEGNLYIPAQGLVAYRPDSQNPNTGSLTGYTVNNSPIVGAIPD KLRLENDKLWVSTANGVCQVKWETADNPESWNCWRFAAMAKLPQQIPIYSALTNKTPVASLSGGDDIEVLWWSPVNYQTQ KGRYEVRYTPGFTVELKEGASTYQFPRSLPPGKISVDWPGFEWNWNGERFVRGFDEVSLNLSGGGPRGIGSGQLQPEVPI NWNTMRGDLELLDLSAKSTKVKYYSGWVDDTALKPYLTVIPQTRPQNPQPNPLAAVAKQLPSRQ
Sequences:
>Translated_544_residues MRANILGFGIIFLLNACAASIESNSQAANSINPKPEKCPQAQVVSLPASNTNEGFYDRFDFHIRNIVADGDTVKFQALEQ DFVFCRSNNNWTVQSGTLSKELQPENNYADFAQELVNPKFKNIDFQGKTYQYRVVRQPQFTLGENNNISRPDVTDPAKDA VVFELINPNDKNPQRQTLYTLKDLQEIAVKAGYSATGNQLGFPRITSASVHNARIWWSVAFEQGEGNNGIATIVSYDPKT DKFNIIQPESLWSTQITDLTITGDANNPTFWMGTNISGEGNLYIPAQGLVAYRPDSQNPNTGSLTGYTVNNSPIVGAIPD KLRLENDKLWVSTANGVCQVKWETADNPESWNCWRFAAMAKLPQQIPIYSALTNKTPVASLSGGDDIEVLWWSPVNYQTQ KGRYEVRYTPGFTVELKEGASTYQFPRSLPPGKISVDWPGFEWNWNGERFVRGFDEVSLNLSGGGPRGIGSGQLQPEVPI NWNTMRGDLELLDLSAKSTKVKYYSGWVDDTALKPYLTVIPQTRPQNPQPNPLAAVAKQLPSRQ >Mature_544_residues MRANILGFGIIFLLNACAASIESNSQAANSINPKPEKCPQAQVVSLPASNTNEGFYDRFDFHIRNIVADGDTVKFQALEQ DFVFCRSNNNWTVQSGTLSKELQPENNYADFAQELVNPKFKNIDFQGKTYQYRVVRQPQFTLGENNNISRPDVTDPAKDA VVFELINPNDKNPQRQTLYTLKDLQEIAVKAGYSATGNQLGFPRITSASVHNARIWWSVAFEQGEGNNGIATIVSYDPKT DKFNIIQPESLWSTQITDLTITGDANNPTFWMGTNISGEGNLYIPAQGLVAYRPDSQNPNTGSLTGYTVNNSPIVGAIPD KLRLENDKLWVSTANGVCQVKWETADNPESWNCWRFAAMAKLPQQIPIYSALTNKTPVASLSGGDDIEVLWWSPVNYQTQ KGRYEVRYTPGFTVELKEGASTYQFPRSLPPGKISVDWPGFEWNWNGERFVRGFDEVSLNLSGGGPRGIGSGQLQPEVPI NWNTMRGDLELLDLSAKSTKVKYYSGWVDDTALKPYLTVIPQTRPQNPQPNPLAAVAKQLPSRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60551; Mature: 60551
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRANILGFGIIFLLNACAASIESNSQAANSINPKPEKCPQAQVVSLPASNTNEGFYDRFD CCCEEEHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHE FHIRNIVADGDTVKFQALEQDFVFCRSNNNWTVQSGTLSKELQPENNYADFAQELVNPKF EEEEEEEECCCEEEEEEECCEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCHH KNIDFQGKTYQYRVVRQPQFTLGENNNISRPDVTDPAKDAVVFELINPNDKNPQRQTLYT HCCCCCCCEEEEEEEECCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHH LKDLQEIAVKAGYSATGNQLGFPRITSASVHNARIWWSVAFEQGEGNNGIATIVSYDPKT HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCC DKFNIIQPESLWSTQITDLTITGDANNPTFWMGTNISGEGNLYIPAQGLVAYRPDSQNPN CCEEEECCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCCCEEEECCCEEEECCCCCCCC TGSLTGYTVNNSPIVGAIPDKLRLENDKLWVSTANGVCQVKWETADNPESWNCWRFAAMA CCCEEEEEECCCCEEEECCHHEEECCCEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHH KLPQQIPIYSALTNKTPVASLSGGDDIEVLWWSPVNYQTQKGRYEVRYTPGFTVELKEGA HCCCCCCEEHHHCCCCCEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCCEEEEECCCC STYQFPRSLPPGKISVDWPGFEWNWNGERFVRGFDEVSLNLSGGGPRGIGSGQLQPEVPI CCCCCCCCCCCCEEEEECCCEEECCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCC NWNTMRGDLELLDLSAKSTKVKYYSGWVDDTALKPYLTVIPQTRPQNPQPNPLAAVAKQL CCEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHC PSRQ CCCC >Mature Secondary Structure MRANILGFGIIFLLNACAASIESNSQAANSINPKPEKCPQAQVVSLPASNTNEGFYDRFD CCCEEEHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHE FHIRNIVADGDTVKFQALEQDFVFCRSNNNWTVQSGTLSKELQPENNYADFAQELVNPKF EEEEEEEECCCEEEEEEECCEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCHH KNIDFQGKTYQYRVVRQPQFTLGENNNISRPDVTDPAKDAVVFELINPNDKNPQRQTLYT HCCCCCCCEEEEEEEECCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHH LKDLQEIAVKAGYSATGNQLGFPRITSASVHNARIWWSVAFEQGEGNNGIATIVSYDPKT HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCC DKFNIIQPESLWSTQITDLTITGDANNPTFWMGTNISGEGNLYIPAQGLVAYRPDSQNPN CCEEEECCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCCCEEEECCCEEEECCCCCCCC TGSLTGYTVNNSPIVGAIPDKLRLENDKLWVSTANGVCQVKWETADNPESWNCWRFAAMA CCCEEEEEECCCCEEEECCHHEEECCCEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHH KLPQQIPIYSALTNKTPVASLSGGDDIEVLWWSPVNYQTQKGRYEVRYTPGFTVELKEGA HCCCCCCEEHHHCCCCCEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCCEEEEECCCC STYQFPRSLPPGKISVDWPGFEWNWNGERFVRGFDEVSLNLSGGGPRGIGSGQLQPEVPI CCCCCCCCCCCCEEEEECCCEEECCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCC NWNTMRGDLELLDLSAKSTKVKYYSGWVDDTALKPYLTVIPQTRPQNPQPNPLAAVAKQL CCEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHC PSRQ CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA