| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231022
Identifier: 17231022
GI number: 17231022
Start: 4252882
End: 4254141
Strand: Reverse
Name: 17231022
Synonym: all3530
Alternate gene names: NA
Gene position: 4254141-4252882 (Counterclockwise)
Preceding gene: 17231023
Following gene: 17231018
Centisome position: 66.33
GC content: 45.87
Gene sequence:
>1260_bases ATGACTAGGCGAGGCGATGATTCTTGGGCAAACCGTGTAACTGGTGTCTGGAAAAAGGCAGCAGATGAGTTGGTGCAGAG ATTACCAGTGGAACAGGTTTCTCAGAAGTTTGTCCAGTGGTTCAGTGTAAGTGAGGCGGAAGTTGCCGAGATTTTGGAGA AGGTACGCCAAGAACTGCCAACTACAGAGGCTTTGTTAATTGGCAAGCCACAAGCTGGTAAAAGTTCTATTGTCCGGGGA CTCACGGGGGTTTCTGCGGAGATTGTCGGGCAAGGCTTTCGTCCCCATACCCAACACACCCAACGCTATGCTTATCCATC TAATGACCTGCCTTTACTGGTTTTTACTGATACTGTAGGGCTAGGCGATATCAACCAGGAAACTCAGGCAGTTATTCAAG AATTGGTGGGAGACTTGCAGAAAAAAAGTAGCCGCGCCAGAGTCTTGATTTTGACAGTGAAAATTAATGATTTCGCTACT GATACCCTGCGGCAAATTGCTCAAGAATTGCGGCGAAAGTATCCAGAAATCCCCTGTTTACTTGTGGTTACTTGTTTACA TGAAGTTTACCCCCCTGATATTGAAGATCATCCAGATTATCCCCCAAACTATGAGGAACTAAATCGGGCTTTTGTGGCAA TTCAGGCAGCCTTTACGGGACTTTATGACCGTTCACTCCTCATTGACTTTACCCTAGAAGAAGATGGTTACAATCCTGTA TTTTACGGCTTAGATGCCCTTAGAGATAATCTGGCAGAACTCCTCCCAGAAGCGGAAGCCCAAGCTATTTACCAATTATT AGATAAGCAAACAAGTGAGAAACTAGGCAATATCTACCGGGATGCAGGCAGACGCTACACCTTATCATTTGCGGTGATGG CTGCTGCACTGGCAGCCGTACCCTTGCCCTTTGCAACGATGCCCGTACTTACAGCTTTGCAAGTATCGATGGTAACGCTT TTAGGTAAATTATATGGTCAAACTGTCACACCATCCCAGGCAGGTGGTATTGTGAGTGCGATCGCCGGTGGTTTTTTAGC CCAAGCCATAGGAAGGGAACTAGTAAAATTTATACCAGGATTTGGGAGTGCGATCGCCGCATCTTGGGCAGCAGCTTATA CATGGTCTTTGGGTGAAACAGCCTGTGTCTACTTTGGTGATTTAATGGGTGGTAATAAACCAGATCCCCAAAAAATCCAA TCTGTCATGGAGGAAGCTTTTGCTAAGGCCAAAGAACGGTTTAAAGGAATTAAATCCTGA
Upstream 100 bases:
>100_bases TACCTTGCACTGATGTCGTCCGCTTTGGTGCTGATGTTTTATTAGATGCCGTCATGCAGAATTAAAATATATAAAGGGTG TAACTTAACCAGCAAGTGCA
Downstream 100 bases:
>100_bases AAATATTGTCTTTCTCCATTGAATAATGGGAGCTTCCATGACCTCTCCCCAAGCCATCTCCCATGTAGAGATTTTTTACT TATTTCCCCAAATTACGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MTRRGDDSWANRVTGVWKKAADELVQRLPVEQVSQKFVQWFSVSEAEVAEILEKVRQELPTTEALLIGKPQAGKSSIVRG LTGVSAEIVGQGFRPHTQHTQRYAYPSNDLPLLVFTDTVGLGDINQETQAVIQELVGDLQKKSSRARVLILTVKINDFAT DTLRQIAQELRRKYPEIPCLLVVTCLHEVYPPDIEDHPDYPPNYEELNRAFVAIQAAFTGLYDRSLLIDFTLEEDGYNPV FYGLDALRDNLAELLPEAEAQAIYQLLDKQTSEKLGNIYRDAGRRYTLSFAVMAAALAAVPLPFATMPVLTALQVSMVTL LGKLYGQTVTPSQAGGIVSAIAGGFLAQAIGRELVKFIPGFGSAIAASWAAAYTWSLGETACVYFGDLMGGNKPDPQKIQ SVMEEAFAKAKERFKGIKS
Sequences:
>Translated_419_residues MTRRGDDSWANRVTGVWKKAADELVQRLPVEQVSQKFVQWFSVSEAEVAEILEKVRQELPTTEALLIGKPQAGKSSIVRG LTGVSAEIVGQGFRPHTQHTQRYAYPSNDLPLLVFTDTVGLGDINQETQAVIQELVGDLQKKSSRARVLILTVKINDFAT DTLRQIAQELRRKYPEIPCLLVVTCLHEVYPPDIEDHPDYPPNYEELNRAFVAIQAAFTGLYDRSLLIDFTLEEDGYNPV FYGLDALRDNLAELLPEAEAQAIYQLLDKQTSEKLGNIYRDAGRRYTLSFAVMAAALAAVPLPFATMPVLTALQVSMVTL LGKLYGQTVTPSQAGGIVSAIAGGFLAQAIGRELVKFIPGFGSAIAASWAAAYTWSLGETACVYFGDLMGGNKPDPQKIQ SVMEEAFAKAKERFKGIKS >Mature_418_residues TRRGDDSWANRVTGVWKKAADELVQRLPVEQVSQKFVQWFSVSEAEVAEILEKVRQELPTTEALLIGKPQAGKSSIVRGL TGVSAEIVGQGFRPHTQHTQRYAYPSNDLPLLVFTDTVGLGDINQETQAVIQELVGDLQKKSSRARVLILTVKINDFATD TLRQIAQELRRKYPEIPCLLVVTCLHEVYPPDIEDHPDYPPNYEELNRAFVAIQAAFTGLYDRSLLIDFTLEEDGYNPVF YGLDALRDNLAELLPEAEAQAIYQLLDKQTSEKLGNIYRDAGRRYTLSFAVMAAALAAVPLPFATMPVLTALQVSMVTLL GKLYGQTVTPSQAGGIVSAIAGGFLAQAIGRELVKFIPGFGSAIAASWAAAYTWSLGETACVYFGDLMGGNKPDPQKIQS VMEEAFAKAKERFKGIKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46091; Mature: 45960
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRGDDSWANRVTGVWKKAADELVQRLPVEQVSQKFVQWFSVSEAEVAEILEKVRQELP CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC TTEALLIGKPQAGKSSIVRGLTGVSAEIVGQGFRPHTQHTQRYAYPSNDLPLLVFTDTVG CCCEEEECCCCCCHHHHHHHHHCCCHHHHCCCCCCCHHHHHHCCCCCCCCCEEEEECCCC LGDINQETQAVIQELVGDLQKKSSRARVLILTVKINDFATDTLRQIAQELRRKYPEIPCL CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHCCCCHHH LVVTCLHEVYPPDIEDHPDYPPNYEELNRAFVAIQAAFTGLYDRSLLIDFTLEEDGYNPV HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHH FYGLDALRDNLAELLPEAEAQAIYQLLDKQTSEKLGNIYRDAGRRYTLSFAVMAAALAAV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHH PLPFATMPVLTALQVSMVTLLGKLYGQTVTPSQAGGIVSAIAGGFLAQAIGRELVKFIPG CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHCCC FGSAIAASWAAAYTWSLGETACVYFGDLMGGNKPDPQKIQSVMEEAFAKAKERFKGIKS CCHHHHHHHHHHHEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TRRGDDSWANRVTGVWKKAADELVQRLPVEQVSQKFVQWFSVSEAEVAEILEKVRQELP CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC TTEALLIGKPQAGKSSIVRGLTGVSAEIVGQGFRPHTQHTQRYAYPSNDLPLLVFTDTVG CCCEEEECCCCCCHHHHHHHHHCCCHHHHCCCCCCCHHHHHHCCCCCCCCCEEEEECCCC LGDINQETQAVIQELVGDLQKKSSRARVLILTVKINDFATDTLRQIAQELRRKYPEIPCL CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHCCCCHHH LVVTCLHEVYPPDIEDHPDYPPNYEELNRAFVAIQAAFTGLYDRSLLIDFTLEEDGYNPV HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHH FYGLDALRDNLAELLPEAEAQAIYQLLDKQTSEKLGNIYRDAGRRYTLSFAVMAAALAAV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHH PLPFATMPVLTALQVSMVTLLGKLYGQTVTPSQAGGIVSAIAGGFLAQAIGRELVKFIPG CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHCCC FGSAIAASWAAAYTWSLGETACVYFGDLMGGNKPDPQKIQSVMEEAFAKAKERFKGIKS CCHHHHHHHHHHHEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA