| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231021
Identifier: 17231021
GI number: 17231021
Start: 4252227
End: 4252802
Strand: Direct
Name: 17231021
Synonym: alr3529
Alternate gene names: NA
Gene position: 4252227-4252802 (Clockwise)
Preceding gene: 17231020
Following gene: 17231025
Centisome position: 66.3
GC content: 44.27
Gene sequence:
>576_bases GTGGGCTTATTTGATGATTTGAGTCGGTTTCTAGAAAACCGTTTAGAGGAATTCTTGCGGAATAATCCACATTTGGAGTT GGAGGCGCTGTTAGAACAGCTGCGTCAGCAAGAGGAAGATACTTTAAAATTGATAGCAGATTTACAGTTACAAGAGAAGC GATCGCAAGAAGATATTCTGGCCACAGCGCAAGAAATTCAGCGTTGGCACATCAGGGTTCAAAAAGCCAAAAATGCTGGT AGACAAGATTTGGTCGGGCCAGCAGAAGAGAGAGAAGCAGCCTTATTGCGTGAGGGTAATCAGCTTTGGGGACATATGCA AGGGCTAAAAGAACGCTTAGAGCAATCCAAAGAACTACTCAGTAAGATACAAACTAGGCGGCAAGAAGTACAAACTAAAG CGGCACAAGCACAAACCGCACGGGCTAAAGCCCAAACCCAGCAGCGTATAGAAACTAATGGTTGGTGGACTTCCACTACC AGTTCTAGTGATGGATTTGATGATTTAGAAGAAAAGTTCCGCCGTTGGGAAACCCAAGATGAACTAGAGCAGATGAAGCG TAATTTGGGGAAATAA
Upstream 100 bases:
>100_bases TAGTTTATCAAAGCACCGTTTACTTTAATAGTTTGATTTTCTTCTACGATGAGAATACTACAATAAAGTAGTAACGCATC TAACCTCTGGAGTTCTAACA
Downstream 100 bases:
>100_bases GTAAAAAATCTCTACATGGGAGATGGCTTGGGGAGAGGTCATGGAAGCTCCCATTATTCAATGGAGAAAGACAATATTTT CAGGATTTAATTCCTTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MGLFDDLSRFLENRLEEFLRNNPHLELEALLEQLRQQEEDTLKLIADLQLQEKRSQEDILATAQEIQRWHIRVQKAKNAG RQDLVGPAEEREAALLREGNQLWGHMQGLKERLEQSKELLSKIQTRRQEVQTKAAQAQTARAKAQTQQRIETNGWWTSTT SSSDGFDDLEEKFRRWETQDELEQMKRNLGK
Sequences:
>Translated_191_residues MGLFDDLSRFLENRLEEFLRNNPHLELEALLEQLRQQEEDTLKLIADLQLQEKRSQEDILATAQEIQRWHIRVQKAKNAG RQDLVGPAEEREAALLREGNQLWGHMQGLKERLEQSKELLSKIQTRRQEVQTKAAQAQTARAKAQTQQRIETNGWWTSTT SSSDGFDDLEEKFRRWETQDELEQMKRNLGK >Mature_190_residues GLFDDLSRFLENRLEEFLRNNPHLELEALLEQLRQQEEDTLKLIADLQLQEKRSQEDILATAQEIQRWHIRVQKAKNAGR QDLVGPAEEREAALLREGNQLWGHMQGLKERLEQSKELLSKIQTRRQEVQTKAAQAQTARAKAQTQQRIETNGWWTSTTS SSDGFDDLEEKFRRWETQDELEQMKRNLGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22465; Mature: 22334
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLFDDLSRFLENRLEEFLRNNPHLELEALLEQLRQQEEDTLKLIADLQLQEKRSQEDIL CCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATAQEIQRWHIRVQKAKNAGRQDLVGPAEEREAALLREGNQLWGHMQGLKERLEQSKELL HHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKIQTRRQEVQTKAAQAQTARAKAQTQQRIETNGWWTSTTSSSDGFDDLEEKFRRWETQD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHH ELEQMKRNLGK HHHHHHHHHCC >Mature Secondary Structure GLFDDLSRFLENRLEEFLRNNPHLELEALLEQLRQQEEDTLKLIADLQLQEKRSQEDIL CCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATAQEIQRWHIRVQKAKNAGRQDLVGPAEEREAALLREGNQLWGHMQGLKERLEQSKELL HHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKIQTRRQEVQTKAAQAQTARAKAQTQQRIETNGWWTSTTSSSDGFDDLEEKFRRWETQD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHH ELEQMKRNLGK HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA