| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230925
Identifier: 17230925
GI number: 17230925
Start: 4140578
End: 4141510
Strand: Reverse
Name: 17230925
Synonym: all3433
Alternate gene names: NA
Gene position: 4141510-4140578 (Counterclockwise)
Preceding gene: 17230927
Following gene: 17230924
Centisome position: 64.57
GC content: 47.91
Gene sequence:
>933_bases ATGCTTGATACCACCAGCCCACAACTAGAAGCATCGGCGGCACAAAGCTATGCTCATCCTCACTACTGGCAAACACAGAG CCGTATTCGCTCCCTCATAGATAAATATATTGCAGTCGAAATACTACGCGCTCGCTTGCAAGATTTACCGATACAATTTG CCAATCCCCAAGCGCGTCCCTGGAAACTAATTGACTGGCAAGCCATTAACCGCAACCAAATTATCGGTATAGAACCAGAA GTATTTTTATCTATATTGATCGGTGCAATGGACACAGAAGCCCCCATTCGAGGCTACACCCAAACCAGTCGGCAATATTT AGAAAAGTTACATCCCCAGATGGCGCGGTTTGTCGGTGGAACAGTCGATGGAGATGGCGAACTCCAAGAACTTGGTTTGT GGGAAAAAGAAGAACGTCAACACACACCCGCATTAATCAAAATCTACACCCAATTAACAGGGGAGAAAATCACCCCTAAA CATCGTACAATCAGAGGCTACCTCCCCACAAATGACCCCCAAGAAGACCTCTATCGCCACGGCTTACACCGCGTAGCCAC AGAATACGGTGCAACCTGCCTTTACCTGTGGCTAATGGCGCACACAACAGGCGCACTCCAAGAAGTTCTCGAAGAACTCA CGAAAGACGAAATCAACCACATGACCAAATTCTGGGGCTTTGGAGTTTGGGCTTTTCCTGACACAGGACTAATCCGAGTA GGGCGCACCCTCATCAAAACCCGTTCCCAAACCTATCAACGTAACAACCTCATGCGAACCCTACGCCGCATGATGAATAC ACTTAACTGGAACGCCTGGACACTCACCAACAAAGCCACCCTCATCTACACATCAACCCAAACCATGCGCCGCCTGTGGA CATGGCACAACACCCTTAACCCAAAATATCTCAACAATCTACTAAGTAGTTAA
Upstream 100 bases:
>100_bases TTTTCCAACTGAATCACATAAAACTGCCGACTTTAGCCGACTGACAAACGCTGGTGCGATCGCTTAGGCTATTGGGCATA GAAGTCATAGTATAAAAATT
Downstream 100 bases:
>100_bases TAACCCCTCTATACTCTCCTCTGCGTGAACTTTCCCCCAATCCACCCATCAACACCAAAAATGACCCCCCCAGACTTAGA TCCCCAAAAAATCCCCCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MLDTTSPQLEASAAQSYAHPHYWQTQSRIRSLIDKYIAVEILRARLQDLPIQFANPQARPWKLIDWQAINRNQIIGIEPE VFLSILIGAMDTEAPIRGYTQTSRQYLEKLHPQMARFVGGTVDGDGELQELGLWEKEERQHTPALIKIYTQLTGEKITPK HRTIRGYLPTNDPQEDLYRHGLHRVATEYGATCLYLWLMAHTTGALQEVLEELTKDEINHMTKFWGFGVWAFPDTGLIRV GRTLIKTRSQTYQRNNLMRTLRRMMNTLNWNAWTLTNKATLIYTSTQTMRRLWTWHNTLNPKYLNNLLSS
Sequences:
>Translated_310_residues MLDTTSPQLEASAAQSYAHPHYWQTQSRIRSLIDKYIAVEILRARLQDLPIQFANPQARPWKLIDWQAINRNQIIGIEPE VFLSILIGAMDTEAPIRGYTQTSRQYLEKLHPQMARFVGGTVDGDGELQELGLWEKEERQHTPALIKIYTQLTGEKITPK HRTIRGYLPTNDPQEDLYRHGLHRVATEYGATCLYLWLMAHTTGALQEVLEELTKDEINHMTKFWGFGVWAFPDTGLIRV GRTLIKTRSQTYQRNNLMRTLRRMMNTLNWNAWTLTNKATLIYTSTQTMRRLWTWHNTLNPKYLNNLLSS >Mature_310_residues MLDTTSPQLEASAAQSYAHPHYWQTQSRIRSLIDKYIAVEILRARLQDLPIQFANPQARPWKLIDWQAINRNQIIGIEPE VFLSILIGAMDTEAPIRGYTQTSRQYLEKLHPQMARFVGGTVDGDGELQELGLWEKEERQHTPALIKIYTQLTGEKITPK HRTIRGYLPTNDPQEDLYRHGLHRVATEYGATCLYLWLMAHTTGALQEVLEELTKDEINHMTKFWGFGVWAFPDTGLIRV GRTLIKTRSQTYQRNNLMRTLRRMMNTLNWNAWTLTNKATLIYTSTQTMRRLWTWHNTLNPKYLNNLLSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36123; Mature: 36123
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDTTSPQLEASAAQSYAHPHYWQTQSRIRSLIDKYIAVEILRARLQDLPIQFANPQARP CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC WKLIDWQAINRNQIIGIEPEVFLSILIGAMDTEAPIRGYTQTSRQYLEKLHPQMARFVGG EEEEEEEECCCCCEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC TVDGDGELQELGLWEKEERQHTPALIKIYTQLTGEKITPKHRTIRGYLPTNDPQEDLYRH CCCCCCCHHHCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHH GLHRVATEYGATCLYLWLMAHTTGALQEVLEELTKDEINHMTKFWGFGVWAFPDTGLIRV HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHH GRTLIKTRSQTYQRNNLMRTLRRMMNTLNWNAWTLTNKATLIYTSTQTMRRLWTWHNTLN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEECHHHHHHHHHHHCCCC PKYLNNLLSS HHHHHHHHCC >Mature Secondary Structure MLDTTSPQLEASAAQSYAHPHYWQTQSRIRSLIDKYIAVEILRARLQDLPIQFANPQARP CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC WKLIDWQAINRNQIIGIEPEVFLSILIGAMDTEAPIRGYTQTSRQYLEKLHPQMARFVGG EEEEEEEECCCCCEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC TVDGDGELQELGLWEKEERQHTPALIKIYTQLTGEKITPKHRTIRGYLPTNDPQEDLYRH CCCCCCCHHHCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHH GLHRVATEYGATCLYLWLMAHTTGALQEVLEELTKDEINHMTKFWGFGVWAFPDTGLIRV HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHH GRTLIKTRSQTYQRNNLMRTLRRMMNTLNWNAWTLTNKATLIYTSTQTMRRLWTWHNTLN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEECHHHHHHHHHHHCCCC PKYLNNLLSS HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA