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The map label for this gene is pimB [H]

Identifier: 17230917

GI number: 17230917

Start: 4133859

End: 4135025

Strand: Direct

Name: pimB [H]

Synonym: alr3425

Alternate gene names: 17230917

Gene position: 4133859-4135025 (Clockwise)

Preceding gene: 17230916

Following gene: 17230918

Centisome position: 64.45

GC content: 43.36

Gene sequence:

>1167_bases
ATGCCAATTGATACAGTGAGAGAACAAATAAGTTTAGGCACAACTTCTAGAGAACAAGTTAACCATATCTTCTTGTTTTT
AGAGGTTTTTAAACAGGAAGGGGGAATTCAATCTTATGTCAAGGATATTTTTCGGGCATATTCAGGATTGAGTCAAGGTT
ATCAAGCAGAAGTATTACTATTACGGGATAGCCCTGAATGCTCAAACCCTTTTACATCTAATAATTTAAAATTTCATTAC
TTCCAAAATCCATCACCCCAAATAGGCAGAATCAAAATGGCCGGGGTGCTACTAAAATTTTTATTGCAGAGAAGACCACA
GATGGTCTTTTGTGGACATATCAAGCTAGCAGTTTTAGTACAGACACTTTGCCAACCCTTGGGTATTCCCTACACTATCC
TTACTTATGGCAAAGAATTTTGGGAACCGTTAAAAAATCAAGAACGCCGCGCTTTAGCATCAGCCAAGGAGATTTGGACA
ATTAGTCGCTATAGCCGCGATCGCGCCTGTGCTGTTAATGGTATAGATCCTCATAAGGTGAAAATGTTGCCTTGTGCCAT
AGATGGGAAGAAATTTACTCCCGGCCCAAAACAGCCAGAATTAATCGAGAAGTATGGCTTAAGCGATGCCAAGGTATTAA
TGACTGTAGCGCGATTGTGGTCAGGAGATATATACAAAGGCGTGGATGTCACAATTAGGGCATTGCCGAAAATTATCCAG
GCGTTCCCAGAAGTAAAATATTTAGTGATTGGTCGTGGTGATGACCAACCGCGATTGGCTCAGTTAGCCCAAGATTTAGG
TGTAAGCGATCGCGTGATTTTTGCAGGTTTTGTCCCCACTGAACAATTAATGGCACACTACCGCCTAGCTGATGCCTATA
TTATGCCCTCACAAGAAGGTTTTGGAATTGTTTATCTAGAAGCAATGGCTTGTGGTGTACCAGTGCTGTCTGGTGATGAT
GACGGTTCGGCTGACCCCTTGCAGGATGGTAAACTGGGTTGGCGAGTTCCCCATCGCAACCCGGAAGCCGTAGCCGCAGC
TTGTTTAGAAATTCTTCAAGGAGACGATCAGCGTTGTGATGGAGAGTGGCTGCGCGAACAGGCGATCGCACTGTTCGGAA
TGGATGCTTTACAAAAGCAGCTTTTGTCTTTAGTCCAGAGTCAATAG

Upstream 100 bases:

>100_bases
CGCCCAAGCATCAGAAGGAAAATTACTGGTAGATTAGGATACCGTAGCGCACTTGCACCCATCACCGTACTATCTCTAAA
AATCAATAGAAAGAATCTCA

Downstream 100 bases:

>100_bases
TCCATAGTCCACACTCAGAACTAATGACTAATGACCAAACTCGCTATCCTAGAAGGAGAGCAAGATAGTATTTAAAATGA
GCCTTAACAATTCTCAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: Alpha-D-mannose-alpha-(1-6)-phosphatidylmyo-inositol-mannosyltransferase; Alpha-mannosyltransferase; Alpha-manT; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase [H]

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MPIDTVREQISLGTTSREQVNHIFLFLEVFKQEGGIQSYVKDIFRAYSGLSQGYQAEVLLLRDSPECSNPFTSNNLKFHY
FQNPSPQIGRIKMAGVLLKFLLQRRPQMVFCGHIKLAVLVQTLCQPLGIPYTILTYGKEFWEPLKNQERRALASAKEIWT
ISRYSRDRACAVNGIDPHKVKMLPCAIDGKKFTPGPKQPELIEKYGLSDAKVLMTVARLWSGDIYKGVDVTIRALPKIIQ
AFPEVKYLVIGRGDDQPRLAQLAQDLGVSDRVIFAGFVPTEQLMAHYRLADAYIMPSQEGFGIVYLEAMACGVPVLSGDD
DGSADPLQDGKLGWRVPHRNPEAVAAACLEILQGDDQRCDGEWLREQAIALFGMDALQKQLLSLVQSQ

Sequences:

>Translated_388_residues
MPIDTVREQISLGTTSREQVNHIFLFLEVFKQEGGIQSYVKDIFRAYSGLSQGYQAEVLLLRDSPECSNPFTSNNLKFHY
FQNPSPQIGRIKMAGVLLKFLLQRRPQMVFCGHIKLAVLVQTLCQPLGIPYTILTYGKEFWEPLKNQERRALASAKEIWT
ISRYSRDRACAVNGIDPHKVKMLPCAIDGKKFTPGPKQPELIEKYGLSDAKVLMTVARLWSGDIYKGVDVTIRALPKIIQ
AFPEVKYLVIGRGDDQPRLAQLAQDLGVSDRVIFAGFVPTEQLMAHYRLADAYIMPSQEGFGIVYLEAMACGVPVLSGDD
DGSADPLQDGKLGWRVPHRNPEAVAAACLEILQGDDQRCDGEWLREQAIALFGMDALQKQLLSLVQSQ
>Mature_387_residues
PIDTVREQISLGTTSREQVNHIFLFLEVFKQEGGIQSYVKDIFRAYSGLSQGYQAEVLLLRDSPECSNPFTSNNLKFHYF
QNPSPQIGRIKMAGVLLKFLLQRRPQMVFCGHIKLAVLVQTLCQPLGIPYTILTYGKEFWEPLKNQERRALASAKEIWTI
SRYSRDRACAVNGIDPHKVKMLPCAIDGKKFTPGPKQPELIEKYGLSDAKVLMTVARLWSGDIYKGVDVTIRALPKIIQA
FPEVKYLVIGRGDDQPRLAQLAQDLGVSDRVIFAGFVPTEQLMAHYRLADAYIMPSQEGFGIVYLEAMACGVPVLSGDDD
GSADPLQDGKLGWRVPHRNPEAVAAACLEILQGDDQRCDGEWLREQAIALFGMDALQKQLLSLVQSQ

Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 6 of a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1) to generate phosphatidyl-myo-inositol bearing alpha-1,2- and alpha-1,6-linked mannose resid

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI1788357, Length=224, Percent_Identity=26.7857142857143, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.57 [H]

Molecular weight: Translated: 43417; Mature: 43286

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIDTVREQISLGTTSREQVNHIFLFLEVFKQEGGIQSYVKDIFRAYSGLSQGYQAEVLL
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEE
LRDSPECSNPFTSNNLKFHYFQNPSPQIGRIKMAGVLLKFLLQRRPQMVFCGHIKLAVLV
EECCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHH
QTLCQPLGIPYTILTYGKEFWEPLKNQERRALASAKEIWTISRYSRDRACAVNGIDPHKV
HHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCE
KMLPCAIDGKKFTPGPKQPELIEKYGLSDAKVLMTVARLWSGDIYKGVDVTIRALPKIIQ
EEEEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
AFPEVKYLVIGRGDDQPRLAQLAQDLGVSDRVIFAGFVPTEQLMAHYRLADAYIMPSQEG
HCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHEEECCCCCC
FGIVYLEAMACGVPVLSGDDDGSADPLQDGKLGWRVPHRNPEAVAAACLEILQGDDQRCD
CEEEEEEHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
GEWLREQAIALFGMDALQKQLLSLVQSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PIDTVREQISLGTTSREQVNHIFLFLEVFKQEGGIQSYVKDIFRAYSGLSQGYQAEVLL
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEE
LRDSPECSNPFTSNNLKFHYFQNPSPQIGRIKMAGVLLKFLLQRRPQMVFCGHIKLAVLV
EECCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHH
QTLCQPLGIPYTILTYGKEFWEPLKNQERRALASAKEIWTISRYSRDRACAVNGIDPHKV
HHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCE
KMLPCAIDGKKFTPGPKQPELIEKYGLSDAKVLMTVARLWSGDIYKGVDVTIRALPKIIQ
EEEEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
AFPEVKYLVIGRGDDQPRLAQLAQDLGVSDRVIFAGFVPTEQLMAHYRLADAYIMPSQEG
HCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHEEECCCCCC
FGIVYLEAMACGVPVLSGDDDGSADPLQDGKLGWRVPHRNPEAVAAACLEILQGDDQRCD
CEEEEEEHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
GEWLREQAIALFGMDALQKQLLSLVQSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA