Click here to switch to the map view.

The map label for this gene is 17230910

Identifier: 17230910

GI number: 17230910

Start: 4126272

End: 4127747

Strand: Reverse

Name: 17230910

Synonym: all3418

Alternate gene names: NA

Gene position: 4127747-4126272 (Counterclockwise)

Preceding gene: 17230912

Following gene: 17230902

Centisome position: 64.36

GC content: 43.22

Gene sequence:

>1476_bases
ATGACATTCTGGTTTCTCCTCCTATTGGGAATAGCTACTTATCTGATGGTGCAGCGCAGTGTTGCTAACATCACCAAGAC
ACCCATCTGGCTGTTATGGCTGGTGTTGATGACACCTGCGTTGGTTTTAACTGGATGGACACTGGTTTATGGGGTGAAAC
AACCGCCGCCGCCAGCCCTGATATTTTGGCCGTCAATTATCTGCCTTTTGTTATACTGGCTTTTGTTTCAGTGGGGACGG
CAATTGCCGAGGGATACGCAAACTGCACCCCAAACCACAGAATCACAATCGGCTAATCATCCTACCGCAGAACCAGTGCC
TGTACGTCCCATTGAACCAACGGAAGAAACCCAACTGCGAAACTGTTTTCCCTGGTCTATTTACTACGTCCAAAACATTG
AGTATAGACCCCAAGCGGTGATTTGCCGAGGGCAGTTGCGAACTACACCAACTCAAGCTTACCAGCAGATTAGAGCTAAC
ATCGAAGCTCAATTTGGCGATCGCTTCTTGCTCATCTTTCAAGAAGGTTTTAATGGTAAGCCATTCTTCGTCTTGGTTCC
CAACAGCCAAGCGGCTAAAGCCAATTCTAGAAAATCTGAACAACTAACACGCCCAGGATTGGCTTTATTACTGTTAGTAG
CTACTTTAGTAACAACCACCTTAGTAGGTGCAAAAATCGCCGGTATTGACCCTACAAGGCTACAATCTGACCCGAAATTA
CTTTTTCAGGGATTACCCTATGCTTTAGCTTTAATGACTATCTTGGGTATCCATGAGATGGGTCATTACCTGACAGCTAG
ATTTTATAAAATTCGCTCGACCCTGCCCTACTTTATCCCTATACCTTTTTTCTTGGGAACTTTTGGTGCATTTATTCAAA
TGCGGAGTCCAATTCCCAACCGTAAGGCTTTATTTGATGTTGGTATTGCTGGACCCTTAGCTGGTTTTATCGCTACATTA
CCGCTAGTTATTTGGGGTTTGGCTCATTCAGATTTGGTTCCCTTGACTGAAAACACTAGTTTGTTAAACCCTGACGCACT
GAATCCTAAATATTCAATTCTTGTGGCGTTACTGGCTAAATTAGCCTTAGGAAGTGCCTTAACAGCAAAATTAGCGATTG
ATTTACATCCAGTCGCAGTTGCTGGTTTTTTGGGATTAATTGTCACAGCATTAAATCTTATGCCCGTGGGGCAATTAGAT
GGTGGTCACATTATCCATGCGATGTTTGGGCAAAGAACTGCTATGTTTATTGGTCAAATTGCCCGCCTGTTGCTGTTGTT
GCTGTCTTTAGTTCAATCTGAATTTTTCGTATGGGCAATTATCTTATTGTTCATTCCCTTAGTCGATGAACCAGCTTTAA
ATGATGTGACGGAATTGGATACCAAGCGCGATATTTTAGGGTTGTTGGCAATGGCTTTATTGGTAATAATTGTGTTGCCA
ATGCCGGAGGCGATCGCTAATTTATTACAAATCTAA

Upstream 100 bases:

>100_bases
GAACTTTATCTAAAAATCTGGGGTCGCGGGTCTGCTTTGTAGCGGTGGCTGTGGTGCTAACACTACTTGCACGACATTTT
TCAAAATTACTGTAGAAAAC

Downstream 100 bases:

>100_bases
ATATCACAAAGAATAATTTATTTTGCATATTTAAGAAGGTTAGTAGTAAAAACTTTAGTTGTAATTTTCCTAAGTACTAA
ACTTCTTACTACCAACACTT

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidase; Membrane-Associated Zn-Dependent Protease; M50 Family Peptidase; Metalloprotease; Zinc Protease; Membrane-Associated Metallopeptidase; Zinc Metalloprotease; M50 Family Metallopeptidase; M50B Family Peptidase; Peptidase Family; Membrane Associated Metalloprotease; S2P Family Metalloprotease; Integral Membrane Protease

Number of amino acids: Translated: 491; Mature: 490

Protein sequence:

>491_residues
MTFWFLLLLGIATYLMVQRSVANITKTPIWLLWLVLMTPALVLTGWTLVYGVKQPPPPALIFWPSIICLLLYWLLFQWGR
QLPRDTQTAPQTTESQSANHPTAEPVPVRPIEPTEETQLRNCFPWSIYYVQNIEYRPQAVICRGQLRTTPTQAYQQIRAN
IEAQFGDRFLLIFQEGFNGKPFFVLVPNSQAAKANSRKSEQLTRPGLALLLLVATLVTTTLVGAKIAGIDPTRLQSDPKL
LFQGLPYALALMTILGIHEMGHYLTARFYKIRSTLPYFIPIPFFLGTFGAFIQMRSPIPNRKALFDVGIAGPLAGFIATL
PLVIWGLAHSDLVPLTENTSLLNPDALNPKYSILVALLAKLALGSALTAKLAIDLHPVAVAGFLGLIVTALNLMPVGQLD
GGHIIHAMFGQRTAMFIGQIARLLLLLLSLVQSEFFVWAIILLFIPLVDEPALNDVTELDTKRDILGLLAMALLVIIVLP
MPEAIANLLQI

Sequences:

>Translated_491_residues
MTFWFLLLLGIATYLMVQRSVANITKTPIWLLWLVLMTPALVLTGWTLVYGVKQPPPPALIFWPSIICLLLYWLLFQWGR
QLPRDTQTAPQTTESQSANHPTAEPVPVRPIEPTEETQLRNCFPWSIYYVQNIEYRPQAVICRGQLRTTPTQAYQQIRAN
IEAQFGDRFLLIFQEGFNGKPFFVLVPNSQAAKANSRKSEQLTRPGLALLLLVATLVTTTLVGAKIAGIDPTRLQSDPKL
LFQGLPYALALMTILGIHEMGHYLTARFYKIRSTLPYFIPIPFFLGTFGAFIQMRSPIPNRKALFDVGIAGPLAGFIATL
PLVIWGLAHSDLVPLTENTSLLNPDALNPKYSILVALLAKLALGSALTAKLAIDLHPVAVAGFLGLIVTALNLMPVGQLD
GGHIIHAMFGQRTAMFIGQIARLLLLLLSLVQSEFFVWAIILLFIPLVDEPALNDVTELDTKRDILGLLAMALLVIIVLP
MPEAIANLLQI
>Mature_490_residues
TFWFLLLLGIATYLMVQRSVANITKTPIWLLWLVLMTPALVLTGWTLVYGVKQPPPPALIFWPSIICLLLYWLLFQWGRQ
LPRDTQTAPQTTESQSANHPTAEPVPVRPIEPTEETQLRNCFPWSIYYVQNIEYRPQAVICRGQLRTTPTQAYQQIRANI
EAQFGDRFLLIFQEGFNGKPFFVLVPNSQAAKANSRKSEQLTRPGLALLLLVATLVTTTLVGAKIAGIDPTRLQSDPKLL
FQGLPYALALMTILGIHEMGHYLTARFYKIRSTLPYFIPIPFFLGTFGAFIQMRSPIPNRKALFDVGIAGPLAGFIATLP
LVIWGLAHSDLVPLTENTSLLNPDALNPKYSILVALLAKLALGSALTAKLAIDLHPVAVAGFLGLIVTALNLMPVGQLDG
GHIIHAMFGQRTAMFIGQIARLLLLLLSLVQSEFFVWAIILLFIPLVDEPALNDVTELDTKRDILGLLAMALLVIIVLPM
PEAIANLLQI

Specific function: Unknown

COG id: COG0750

COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54394; Mature: 54263

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFWFLLLLGIATYLMVQRSVANITKTPIWLLWLVLMTPALVLTGWTLVYGVKQPPPPAL
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEE
IFWPSIICLLLYWLLFQWGRQLPRDTQTAPQTTESQSANHPTAEPVPVRPIEPTEETQLR
EHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
NCFPWSIYYVQNIEYRPQAVICRGQLRTTPTQAYQQIRANIEAQFGDRFLLIFQEGFNGK
CCCCEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHCCHHCCCCEEEEEEECCCCCC
PFFVLVPNSQAAKANSRKSEQLTRPGLALLLLVATLVTTTLVGAKIAGIDPTRLQSDPKL
CEEEEECCCCHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHH
LFQGLPYALALMTILGIHEMGHYLTARFYKIRSTLPYFIPIPFFLGTFGAFIQMRSPIPN
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHCCCCCC
RKALFDVGIAGPLAGFIATLPLVIWGLAHSDLVPLTENTSLLNPDALNPKYSILVALLAK
CHHEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
LALGSALTAKLAIDLHPVAVAGFLGLIVTALNLMPVGQLDGGHIIHAMFGQRTAMFIGQI
HHHCHHHHHHHEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHH
ARLLLLLLSLVQSEFFVWAIILLFIPLVDEPALNDVTELDTKRDILGLLAMALLVIIVLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
MPEAIANLLQI
CHHHHHHHHCC
>Mature Secondary Structure 
TFWFLLLLGIATYLMVQRSVANITKTPIWLLWLVLMTPALVLTGWTLVYGVKQPPPPAL
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEE
IFWPSIICLLLYWLLFQWGRQLPRDTQTAPQTTESQSANHPTAEPVPVRPIEPTEETQLR
EHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
NCFPWSIYYVQNIEYRPQAVICRGQLRTTPTQAYQQIRANIEAQFGDRFLLIFQEGFNGK
CCCCEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHCCHHCCCCEEEEEEECCCCCC
PFFVLVPNSQAAKANSRKSEQLTRPGLALLLLVATLVTTTLVGAKIAGIDPTRLQSDPKL
CEEEEECCCCHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHH
LFQGLPYALALMTILGIHEMGHYLTARFYKIRSTLPYFIPIPFFLGTFGAFIQMRSPIPN
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHCCCCCC
RKALFDVGIAGPLAGFIATLPLVIWGLAHSDLVPLTENTSLLNPDALNPKYSILVALLAK
CHHEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
LALGSALTAKLAIDLHPVAVAGFLGLIVTALNLMPVGQLDGGHIIHAMFGQRTAMFIGQI
HHHCHHHHHHHEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHH
ARLLLLLLSLVQSEFFVWAIILLFIPLVDEPALNDVTELDTKRDILGLLAMALLVIIVLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
MPEAIANLLQI
CHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA