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The map label for this gene is 17230909

Identifier: 17230909

GI number: 17230909

Start: 4125639

End: 4126148

Strand: Direct

Name: 17230909

Synonym: alr3417

Alternate gene names: NA

Gene position: 4125639-4126148 (Clockwise)

Preceding gene: 17230908

Following gene: 17230911

Centisome position: 64.32

GC content: 44.31

Gene sequence:

>510_bases
ATGGACGCAATCTTTATTCCGCAGCTAACTAAAGCCCCGGAGCGGACAGAGGAAGTTCAAGTTAAGGAGTTTCTGCCTGG
GCTAGAGACTTTGACACCTGTACGTGGCCTTGTCCGCATACAGCATCAGGGTAATTACCTGCAAGTGTCAGCACAGGCGG
AAGCAATTATTACTTGTACCTGCAATCGCTGCTTACAGCAGTACAATCAGCGTTTAGCTGTAAATACTCAAGAAGTTATT
TGGTTGGATGAGGCTGTCGAGCAAGAGCAAAACCTGCCTTTAGAACGGGAAGTAGCTATGGAAGATTTGCTAGAAACCGT
ATCGCCTAATGGTTATTTTTATCCCAGTGAATGGTTGTATGAACAAATGTGTTTAGCGTTGCCGCAACGTCAATTATGTG
ACATTAATTGTCCGGGCATTCTAACTGATAATAGTGGTGAAAGTTCAGAGCAAGGGATTGATAATCGTTGGTCTGGGTTG
AAGGCACTGAAAAAACAGTTACCAGGATAG

Upstream 100 bases:

>100_bases
TCTGCATATTTATTCTTCCTAAAAGCTAAACTAAAAATGGATTATCAGCAAAATTGCTGATGATTGACATAAATTCTTGT
AATGATGTTTCCCAGATCCT

Downstream 100 bases:

>100_bases
TAATATTTTGCCCATGTAATTTTAAGTGTTGGTAGTAAGAAGTTTAGTACTTAGGAAAATTACAACTAAAGTTTTTACTA
CTAACCTTCTTAAATATGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MDAIFIPQLTKAPERTEEVQVKEFLPGLETLTPVRGLVRIQHQGNYLQVSAQAEAIITCTCNRCLQQYNQRLAVNTQEVI
WLDEAVEQEQNLPLEREVAMEDLLETVSPNGYFYPSEWLYEQMCLALPQRQLCDINCPGILTDNSGESSEQGIDNRWSGL
KALKKQLPG

Sequences:

>Translated_169_residues
MDAIFIPQLTKAPERTEEVQVKEFLPGLETLTPVRGLVRIQHQGNYLQVSAQAEAIITCTCNRCLQQYNQRLAVNTQEVI
WLDEAVEQEQNLPLEREVAMEDLLETVSPNGYFYPSEWLYEQMCLALPQRQLCDINCPGILTDNSGESSEQGIDNRWSGL
KALKKQLPG
>Mature_169_residues
MDAIFIPQLTKAPERTEEVQVKEFLPGLETLTPVRGLVRIQHQGNYLQVSAQAEAIITCTCNRCLQQYNQRLAVNTQEVI
WLDEAVEQEQNLPLEREVAMEDLLETVSPNGYFYPSEWLYEQMCLALPQRQLCDINCPGILTDNSGESSEQGIDNRWSGL
KALKKQLPG

Specific function: Unknown

COG id: COG1399

COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19195; Mature: 19195

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAIFIPQLTKAPERTEEVQVKEFLPGLETLTPVRGLVRIQHQGNYLQVSAQAEAIITCT
CCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCEEEEECCCCEEEEHH
CNRCLQQYNQRLAVNTQEVIWLDEAVEQEQNLPLEREVAMEDLLETVSPNGYFYPSEWLY
HHHHHHHHHHHHCCCCHHEEEHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHH
EQMCLALPQRQLCDINCPGILTDNSGESSEQGIDNRWSGLKALKKQLPG
HHHHHHCCCHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDAIFIPQLTKAPERTEEVQVKEFLPGLETLTPVRGLVRIQHQGNYLQVSAQAEAIITCT
CCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCEEEEECCCCEEEEHH
CNRCLQQYNQRLAVNTQEVIWLDEAVEQEQNLPLEREVAMEDLLETVSPNGYFYPSEWLY
HHHHHHHHHHHHCCCCHHEEEHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHH
EQMCLALPQRQLCDINCPGILTDNSGESSEQGIDNRWSGLKALKKQLPG
HHHHHHCCCHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA