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The map label for this gene is oxaA

Identifier: 17230907

GI number: 17230907

Start: 4123813

End: 4124955

Strand: Direct

Name: oxaA

Synonym: alr3415

Alternate gene names: 17230907

Gene position: 4123813-4124955 (Clockwise)

Preceding gene: 17230906

Following gene: 17230908

Centisome position: 64.3

GC content: 45.49

Gene sequence:

>1143_bases
ATGGATTTTGGTATCGGGTTTCTCTCGAACAACGTCATGTTGCCGATCATAGACTTTTTCTATAGCGTTGTGCCGAGCTA
TGGATTGGCGATCGTTGCCTTAACATTGATAATCCGCTTCGCGCTCTATCCCCTGAGTGCTGGTCAAATTCGCAATATGC
GGAAAATGCGAATTGTGCAACCCCTCATGCAAAAGCGGATGGCAGAAATCAAAGAGCGCTATAAGGACGATCCGCAGAAG
CAGCAAGAAGAAATGATGAACGTCCAGAAGGAGTTTGGCAACCCCTTAGCTGGATGTTTGCCGTTACTGCTGCAAATGCC
AGTCCTGTTGGCTCTGTTTGCCACCTTGCGGGGTTCACCATTTGCTGGAGTTAATTACTCTGTGAACCTGCAAATCTTCC
CCTCTGAGCAAATCGAACGCATCCAACCCCAAGCGTTCGCCACTCCCCCGCAAAATATTTACATTGCCGATGGGGAGCAT
ACTAAAGTTACAGCCATCCTCCCTGGCGGTAATAAGTTAGCGGTAGGCGAAAAAACTAAAATTCAATATCAGACCCTTGA
GGGTAAACCATTCCCAGTTCTATTAGCCGAACACCCAGAGAGTAAACTGTCGCCTGAATGGAAAATTACCAAGGGTGAAG
ATCGAATTAAAATCGATGCCGAGGGCAATATAGAAGCCCTACAGCCAGGAGATGTCACCATTCAAGGTACAATTCCCGGA
TTAGCTGCCGATAAAGGATTTTTATTCATTGATGCTTTAGGTAGAGTAGGCGCAATCGATCCCGATAACACCATCCACTG
GGATATCGTGGGAATGATCGTCTTCTTTGGTATCAGCCTTTACGTTAGCCAAATGCTTTCTGGGCAAAATTCTAGTGGTG
GTAATCCCCAACAGGATACGGTCAACAAAATTACTCCTGTGATATTTTCCGGGATGTTTTTGTTCTTCCCTCTGCCGGCT
GGTGTACTCATGTACATGGTGATTGGTAACGTTTTCCAAACCCTACAAACCTATATCCTCTCCCGCGAACCTTTACCAGA
GGAAATACAAAAAATTGTAGAAACTCAGGAAAAACAAGCGGTGGCGGAACAAAAGACATTACCTTTTGAGCCAAAAAGTT
CTAAGAAAAAGACCACAGGTTGA

Upstream 100 bases:

>100_bases
TTGTGCGGCTATCCGTAGCATAATATAGTCGCACAGTCATCCCGATTTAGATAAATTAGATTCAGTTCAGTTTACAGTAC
CTCAGGTTGAATTCAGAATA

Downstream 100 bases:

>100_bases
TAAATGAGCAACAATCCCATGCAGCGAGGTCAGCAGTGGTTACAATCACTGCTGGAACTCACTGGGGTATCAGCTGAGAT
TCACGGTAGTTTAGAAACTG

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MDFGIGFLSNNVMLPIIDFFYSVVPSYGLAIVALTLIIRFALYPLSAGQIRNMRKMRIVQPLMQKRMAEIKERYKDDPQK
QQEEMMNVQKEFGNPLAGCLPLLLQMPVLLALFATLRGSPFAGVNYSVNLQIFPSEQIERIQPQAFATPPQNIYIADGEH
TKVTAILPGGNKLAVGEKTKIQYQTLEGKPFPVLLAEHPESKLSPEWKITKGEDRIKIDAEGNIEALQPGDVTIQGTIPG
LAADKGFLFIDALGRVGAIDPDNTIHWDIVGMIVFFGISLYVSQMLSGQNSSGGNPQQDTVNKITPVIFSGMFLFFPLPA
GVLMYMVIGNVFQTLQTYILSREPLPEEIQKIVETQEKQAVAEQKTLPFEPKSSKKKTTG

Sequences:

>Translated_380_residues
MDFGIGFLSNNVMLPIIDFFYSVVPSYGLAIVALTLIIRFALYPLSAGQIRNMRKMRIVQPLMQKRMAEIKERYKDDPQK
QQEEMMNVQKEFGNPLAGCLPLLLQMPVLLALFATLRGSPFAGVNYSVNLQIFPSEQIERIQPQAFATPPQNIYIADGEH
TKVTAILPGGNKLAVGEKTKIQYQTLEGKPFPVLLAEHPESKLSPEWKITKGEDRIKIDAEGNIEALQPGDVTIQGTIPG
LAADKGFLFIDALGRVGAIDPDNTIHWDIVGMIVFFGISLYVSQMLSGQNSSGGNPQQDTVNKITPVIFSGMFLFFPLPA
GVLMYMVIGNVFQTLQTYILSREPLPEEIQKIVETQEKQAVAEQKTLPFEPKSSKKKTTG
>Mature_380_residues
MDFGIGFLSNNVMLPIIDFFYSVVPSYGLAIVALTLIIRFALYPLSAGQIRNMRKMRIVQPLMQKRMAEIKERYKDDPQK
QQEEMMNVQKEFGNPLAGCLPLLLQMPVLLALFATLRGSPFAGVNYSVNLQIFPSEQIERIQPQAFATPPQNIYIADGEH
TKVTAILPGGNKLAVGEKTKIQYQTLEGKPFPVLLAEHPESKLSPEWKITKGEDRIKIDAEGNIEALQPGDVTIQGTIPG
LAADKGFLFIDALGRVGAIDPDNTIHWDIVGMIVFFGISLYVSQMLSGQNSSGGNPQQDTVNKITPVIFSGMFLFFPLPA
GVLMYMVIGNVFQTLQTYILSREPLPEEIQKIVETQEKQAVAEQKTLPFEPKSSKKKTTG

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily

Homologues:

Organism=Escherichia coli, GI1790140, Length=129, Percent_Identity=38.7596899224806, Blast_Score=95, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OXAA_NOSS1 (Q8YRM9)

Other databases:

- EMBL:   BA000019
- PIR:   AH2232
- RefSeq:   NP_487455.1
- STRING:   Q8YRM9
- GeneID:   1107013
- GenomeReviews:   BA000019_GR
- KEGG:   ana:alr3415
- NMPDR:   fig|103690.1.peg.3722
- eggNOG:   COG0706
- HOGENOM:   HBG285278
- OMA:   FATLRGS
- ProtClustDB:   PRK02654
- BioCyc:   NSP103690:ALR3415-MONOMER
- HAMAP:   MF_01810
- InterPro:   IPR001708
- PANTHER:   PTHR12428
- TIGRFAMs:   TIGR03592

Pfam domain/function: PF02096 60KD_IMP

EC number: NA

Molecular weight: Translated: 42147; Mature: 42147

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x40c4fcb4)-; HASH(0x11f3d88c)-; HASH(0x12c806c4)-;

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFGIGFLSNNVMLPIIDFFYSVVPSYGLAIVALTLIIRFALYPLSAGQIRNMRKMRIVQ
CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
PLMQKRMAEIKERYKDDPQKQQEEMMNVQKEFGNPLAGCLPLLLQMPVLLALFATLRGSP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
FAGVNYSVNLQIFPSEQIERIQPQAFATPPQNIYIADGEHTKVTAILPGGNKLAVGEKTK
CCCCCEEEEEEECCHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEEECCCCEEECCCCCE
IQYQTLEGKPFPVLLAEHPESKLSPEWKITKGEDRIKIDAEGNIEALQPGDVTIQGTIPG
EEEEEECCCCCEEEEECCCCCCCCCCEEEECCCCEEEEECCCCEEEECCCCEEEEECCCC
LAADKGFLFIDALGRVGAIDPDNTIHWDIVGMIVFFGISLYVSQMLSGQNSSGGNPQQDT
CCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
VNKITPVIFSGMFLFFPLPAGVLMYMVIGNVFQTLQTYILSREPLPEEIQKIVETQEKQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VAEQKTLPFEPKSSKKKTTG
HHHHCCCCCCCCCCCCCCCH
>Mature Secondary Structure
MDFGIGFLSNNVMLPIIDFFYSVVPSYGLAIVALTLIIRFALYPLSAGQIRNMRKMRIVQ
CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
PLMQKRMAEIKERYKDDPQKQQEEMMNVQKEFGNPLAGCLPLLLQMPVLLALFATLRGSP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
FAGVNYSVNLQIFPSEQIERIQPQAFATPPQNIYIADGEHTKVTAILPGGNKLAVGEKTK
CCCCCEEEEEEECCHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEEECCCCEEECCCCCE
IQYQTLEGKPFPVLLAEHPESKLSPEWKITKGEDRIKIDAEGNIEALQPGDVTIQGTIPG
EEEEEECCCCCEEEEECCCCCCCCCCEEEECCCCEEEEECCCCEEEECCCCEEEEECCCC
LAADKGFLFIDALGRVGAIDPDNTIHWDIVGMIVFFGISLYVSQMLSGQNSSGGNPQQDT
CCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
VNKITPVIFSGMFLFFPLPAGVLMYMVIGNVFQTLQTYILSREPLPEEIQKIVETQEKQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VAEQKTLPFEPKSSKKKTTG
HHHHCCCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840