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The map label for this gene is acoR [H]

Identifier: 17230877

GI number: 17230877

Start: 4096227

End: 4097414

Strand: Direct

Name: acoR [H]

Synonym: alr3385

Alternate gene names: 17230877

Gene position: 4096227-4097414 (Clockwise)

Preceding gene: 17230876

Following gene: 17230878

Centisome position: 63.87

GC content: 41.67

Gene sequence:

>1188_bases
ATGTTCATTTTAGAGAATGATCCATTAGAGGCAGGACGTGTATATAAAAGCACGGGCGCACTACCCAAGAATATATTACG
CTCAACAGTTTATCGAGCGTGGGAAAGATCCCATCTGCAAGGAGCTAATCCCCACGCGTTACAAGCAGAAAAGCTCTCAC
GTTTGGAGACAGAACGCTTAGTAGAGCAGCAGAGTTATTTGCTTAATGTTGTGCGTCCTTATTTTCAAATTTTATCCCAG
GCAGCTGGTAAAGAACCTCATGCAGTTATGTTAGGCGATCGCCAAGCTATTTTACTAGGCTTAACAGGTGATGCACAAAC
TATCAACTCGCAATCTTTTCCTCAAGCTGGTTCTTTATTATCTGAAAGTGTAGCTGGTGCTAATGGCGTTGGTACACCCC
TAGTAGAAGAAGATTACGTAGAAATTATCGCCAGTGAGCATTTTATTGAAGGCTTCCATCCTTTTACCTGTCAGGGTATC
CCTTTACGTAATGAAAAACAAGAAATTGTGGGAGTATTGAGTATCTCCTCACAACGTCAGGATGCAGGACAACGACTAAA
AGAAATTTTATTGTGTGCGTCTCGTGCTGTCGAGGCAGAATTCTTAATAGCAAACCTAGAAAAAGATATTCATAATGTAC
TAGCCTCTAATCCTGACGACCATCAACCATTAGAAGAACTGCGTCAAGATATCATCCAAGCGCATCATGCTGCGCGCTTA
AAATTGGAAGTCAGCTCTCGGATGGTAGCGGTGAATCGCCTAGATTATGCCAAACAGTTACTGCAACAAGCTGAAAAATC
AATTCGGATATTTCAACGCCATGCCTCAATTTGGCGTAATTTAGCTTCTAGTGACGTTGCTTCAGTGAAAACTATCTCTC
TAACTGACACTATCCAAGATTTTGTGGAGTTACTATCCACGGAAGCTAGCATCCGTAAGATAGAAGTCGTCACTAACTGG
CAAGAGCCAATTATAGTCACTACCGAACCAGCAACTCTTTTACGGCGTTTGTTACGTTATTTTTTGCAATCTTTTGATAT
GGCAGGCAAAGGGGGAACACTAGAGGTGGCTGCTCAAAGGATGGCAAATTCCGAACTTGTCCTAGTGAGTTTTCTGGCTA
TTGCAGCCTTAAATACATATCCATTAGAGCCAACCCCATTAGTTTTTTCCATACCAATAAAAAATTAA

Upstream 100 bases:

>100_bases
ATTGTTATATTTGGCAAAGTTTGTATAACAGTAATATCTTATTAGCTGACTTGAAAATTAAACGAACTTAACATAGGAAT
GCTCTAAAACTTTCAAAATC

Downstream 100 bases:

>100_bases
TAATTTATGAACACTCTGAATTTAGGAAGAGGAAAGGTTTTAATAGCTGATGATGATGAAGATAGCCGAATGATGCTCTC
TTTTGTATTACAGGAAGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MFILENDPLEAGRVYKSTGALPKNILRSTVYRAWERSHLQGANPHALQAEKLSRLETERLVEQQSYLLNVVRPYFQILSQ
AAGKEPHAVMLGDRQAILLGLTGDAQTINSQSFPQAGSLLSESVAGANGVGTPLVEEDYVEIIASEHFIEGFHPFTCQGI
PLRNEKQEIVGVLSISSQRQDAGQRLKEILLCASRAVEAEFLIANLEKDIHNVLASNPDDHQPLEELRQDIIQAHHAARL
KLEVSSRMVAVNRLDYAKQLLQQAEKSIRIFQRHASIWRNLASSDVASVKTISLTDTIQDFVELLSTEASIRKIEVVTNW
QEPIIVTTEPATLLRRLLRYFLQSFDMAGKGGTLEVAAQRMANSELVLVSFLAIAALNTYPLEPTPLVFSIPIKN

Sequences:

>Translated_395_residues
MFILENDPLEAGRVYKSTGALPKNILRSTVYRAWERSHLQGANPHALQAEKLSRLETERLVEQQSYLLNVVRPYFQILSQ
AAGKEPHAVMLGDRQAILLGLTGDAQTINSQSFPQAGSLLSESVAGANGVGTPLVEEDYVEIIASEHFIEGFHPFTCQGI
PLRNEKQEIVGVLSISSQRQDAGQRLKEILLCASRAVEAEFLIANLEKDIHNVLASNPDDHQPLEELRQDIIQAHHAARL
KLEVSSRMVAVNRLDYAKQLLQQAEKSIRIFQRHASIWRNLASSDVASVKTISLTDTIQDFVELLSTEASIRKIEVVTNW
QEPIIVTTEPATLLRRLLRYFLQSFDMAGKGGTLEVAAQRMANSELVLVSFLAIAALNTYPLEPTPLVFSIPIKN
>Mature_395_residues
MFILENDPLEAGRVYKSTGALPKNILRSTVYRAWERSHLQGANPHALQAEKLSRLETERLVEQQSYLLNVVRPYFQILSQ
AAGKEPHAVMLGDRQAILLGLTGDAQTINSQSFPQAGSLLSESVAGANGVGTPLVEEDYVEIIASEHFIEGFHPFTCQGI
PLRNEKQEIVGVLSISSQRQDAGQRLKEILLCASRAVEAEFLIANLEKDIHNVLASNPDDHQPLEELRQDIIQAHHAARL
KLEVSSRMVAVNRLDYAKQLLQQAEKSIRIFQRHASIWRNLASSDVASVKTISLTDTIQDFVELLSTEASIRKIEVVTNW
QEPIIVTTEPATLLRRLLRYFLQSFDMAGKGGTLEVAAQRMANSELVLVSFLAIAALNTYPLEPTPLVFSIPIKN

Specific function: Acts as a transcriptional activator of the acoABCL operon encoding the acetoin dehydrogenase complex [H]

COG id: COG3284

COG function: function code QK; Transcriptional activator of acetoin/glycerol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 sigma-54 factor interaction domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR020441
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR002078 [H]

Pfam domain/function: PF02954 HTH_8; PF00158 Sigma54_activat [H]

EC number: NA

Molecular weight: Translated: 43945; Mature: 43945

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFILENDPLEAGRVYKSTGALPKNILRSTVYRAWERSHLQGANPHALQAEKLSRLETERL
CEEECCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VEQQSYLLNVVRPYFQILSQAAGKEPHAVMLGDRQAILLGLTGDAQTINSQSFPQAGSLL
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHH
SESVAGANGVGTPLVEEDYVEIIASEHFIEGFHPFTCQGIPLRNEKQEIVGVLSISSQRQ
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHH
DAGQRLKEILLCASRAVEAEFLIANLEKDIHNVLASNPDDHQPLEELRQDIIQAHHAARL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHE
KLEVSSRMVAVNRLDYAKQLLQQAEKSIRIFQRHASIWRNLASSDVASVKTISLTDTIQD
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEHHHHHHH
FVELLSTEASIRKIEVVTNWQEPIIVTTEPATLLRRLLRYFLQSFDMAGKGGTLEVAAQR
HHHHHHCCHHHEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
MANSELVLVSFLAIAALNTYPLEPTPLVFSIPIKN
HCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCC
>Mature Secondary Structure
MFILENDPLEAGRVYKSTGALPKNILRSTVYRAWERSHLQGANPHALQAEKLSRLETERL
CEEECCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VEQQSYLLNVVRPYFQILSQAAGKEPHAVMLGDRQAILLGLTGDAQTINSQSFPQAGSLL
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHH
SESVAGANGVGTPLVEEDYVEIIASEHFIEGFHPFTCQGIPLRNEKQEIVGVLSISSQRQ
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHH
DAGQRLKEILLCASRAVEAEFLIANLEKDIHNVLASNPDDHQPLEELRQDIIQAHHAARL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHE
KLEVSSRMVAVNRLDYAKQLLQQAEKSIRIFQRHASIWRNLASSDVASVKTISLTDTIQD
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEHHHHHHH
FVELLSTEASIRKIEVVTNWQEPIIVTTEPATLLRRLLRYFLQSFDMAGKGGTLEVAAQR
HHHHHHCCHHHEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
MANSELVLVSFLAIAALNTYPLEPTPLVFSIPIKN
HCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377; 10368162 [H]