| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is crcB
Identifier: 17230832
GI number: 17230832
Start: 4036436
End: 4036909
Strand: Direct
Name: crcB
Synonym: alr3340
Alternate gene names: 17230832
Gene position: 4036436-4036909 (Clockwise)
Preceding gene: 17230831
Following gene: 17230834
Centisome position: 62.93
GC content: 44.09
Gene sequence:
>474_bases ATGGGATTTGGATTCAAGATTTTGGTTGAGCAGAGTATCCAATTGTTGACTGTTGCACCAAGACTCGTCCCAGAAGTTTT GCAACAACCGACAATTCGTCATCCTATTGCTGTGAGTTTGGGTGCGATCGCCGGCGCACTCAGTCGCTATTATCTCAGTT TGTGGTTTGCCCAACGCTTCGGCATAACTTTTCCCTACGGCACATTGTTCATTAATATTACTGGCTGTTTAGCTATGGGT TTCTTTTATGCCCTAGCGCTAGAGCGATTATCCCTAATTTCCCCCGAAATCAGATTACTTGTAGCAGTTGGTTTTCTCGG TGCATACACCACATTTTCAACTTATGCCTTAGACACCTTTACCCTTTTAGGCGATCGTAATTTACTAGCAGCAGGGTTTT ACTGGGCTGGCAGTAGCATATTAGGAGTGATCAGCATCCAGATAGGGATAATTCTGGGTAGATTATGTCAGTAG
Upstream 100 bases:
>100_bases TCTGGAAAGTCGAGAAGAAAAATCTGTATACACTTTCTAGTAACACATCTTGGTTAGGGCAAGAATTACAAGGGCGAGTC ATACAAACTTGGGTGTAAGA
Downstream 100 bases:
>100_bases TCGTATTGGCAAGGGTATAGGGGTATAGGGGTATAGGGATAAATCTTTCTTTCCCTCACACCCTTATACCCTTACACCCT CACACCCTCCTAACCCATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MGFGFKILVEQSIQLLTVAPRLVPEVLQQPTIRHPIAVSLGAIAGALSRYYLSLWFAQRFGITFPYGTLFINITGCLAMG FFYALALERLSLISPEIRLLVAVGFLGAYTTFSTYALDTFTLLGDRNLLAAGFYWAGSSILGVISIQIGIILGRLCQ
Sequences:
>Translated_157_residues MGFGFKILVEQSIQLLTVAPRLVPEVLQQPTIRHPIAVSLGAIAGALSRYYLSLWFAQRFGITFPYGTLFINITGCLAMG FFYALALERLSLISPEIRLLVAVGFLGAYTTFSTYALDTFTLLGDRNLLAAGFYWAGSSILGVISIQIGIILGRLCQ >Mature_156_residues GFGFKILVEQSIQLLTVAPRLVPEVLQQPTIRHPIAVSLGAIAGALSRYYLSLWFAQRFGITFPYGTLFINITGCLAMGF FYALALERLSLISPEIRLLVAVGFLGAYTTFSTYALDTFTLLGDRNLLAAGFYWAGSSILGVISIQIGIILGRLCQ
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CRCB_NOSS1 (Q8YRV2)
Other databases:
- EMBL: BA000019 - PIR: AE2223 - RefSeq: NP_487380.1 - STRING: Q8YRV2 - GeneID: 1106938 - GenomeReviews: BA000019_GR - KEGG: ana:alr3340 - NMPDR: fig|103690.1.peg.3647 - eggNOG: COG0239 - HOGENOM: HBG753179 - OMA: SNWFKKR - ProtClustDB: CLSK895942 - BioCyc: NSP103690:ALR3340-MONOMER - HAMAP: MF_00454 - InterPro: IPR003691 - TIGRFAMs: TIGR00494
Pfam domain/function: PF02537 CRCB
EC number: NA
Molecular weight: Translated: 17144; Mature: 17012
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x12141ac4)-; HASH(0x1255c928)-; HASH(0x12706068)-; HASH(0x1270b0b4)-;
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFGFKILVEQSIQLLTVAPRLVPEVLQQPTIRHPIAVSLGAIAGALSRYYLSLWFAQRF CCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GITFPYGTLFINITGCLAMGFFYALALERLSLISPEIRLLVAVGFLGAYTTFSTYALDTF CCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH TLLGDRNLLAAGFYWAGSSILGVISIQIGIILGRLCQ HEECCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure GFGFKILVEQSIQLLTVAPRLVPEVLQQPTIRHPIAVSLGAIAGALSRYYLSLWFAQRF CCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GITFPYGTLFINITGCLAMGFFYALALERLSLISPEIRLLVAVGFLGAYTTFSTYALDTF CCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH TLLGDRNLLAAGFYWAGSSILGVISIQIGIILGRLCQ HEECCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11759840