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The map label for this gene is ywdK [H]

Identifier: 17230696

GI number: 17230696

Start: 3870365

End: 3870745

Strand: Direct

Name: ywdK [H]

Synonym: alr3204

Alternate gene names: 17230696

Gene position: 3870365-3870745 (Clockwise)

Preceding gene: 17230695

Following gene: 17230702

Centisome position: 60.34

GC content: 49.87

Gene sequence:

>381_bases
ATGACGCAGATTTTTGTTAGCATAGCTGCCATTTTAGGCGGTTTGTCCGTTGCCGCCGGGGCTTTCGCTTCCCATGCCCT
GCGGGAAAGAATTAGTGAGCGATCGCTGGAAATCTTCGACACTGGCGCTCGCTACCAAATGTATCATGCCCTCGCGCTTT
TGCTAGTCGCTCTCCTCATCAGTCGTACCCCAACCCCACCCACTACCTTATTAGCTAGTGGGTGGTTATTCATCATCGGT
ATAGCAATTTTTTCTGGCAGCCTGTATGCCCTCAGTTTAACTGGAATTAAAATCTTAGGGGCGATCACTCCCCTTGGTGG
TGTCGCTTTTTTGCTTGGCTGGGGCGCGTTAGCTGTTGCCGCTTTTAGTATAAAGCTTTAA

Upstream 100 bases:

>100_bases
GAGAATATTTAGATTATAAAGCTAAAGAATTCAACGCTAATTTTCAGGTCAATGAGGAAGGCTCGGTATCATATCATTTT
GATGTCTAATTCCCCATCTA

Downstream 100 bases:

>100_bases
ATCTCAGTGCTGAGTAATTTATCTCGTAGGGTGGGCATTGCCCACCACATTACGTTCTAGCTAACTGCGATCGCCTGATT
CAAGCGTGGCTTATCCAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MTQIFVSIAAILGGLSVAAGAFASHALRERISERSLEIFDTGARYQMYHALALLLVALLISRTPTPPTTLLASGWLFIIG
IAIFSGSLYALSLTGIKILGAITPLGGVAFLLGWGALAVAAFSIKL

Sequences:

>Translated_126_residues
MTQIFVSIAAILGGLSVAAGAFASHALRERISERSLEIFDTGARYQMYHALALLLVALLISRTPTPPTTLLASGWLFIIG
IAIFSGSLYALSLTGIKILGAITPLGGVAFLLGWGALAVAAFSIKL
>Mature_125_residues
TQIFVSIAAILGGLSVAAGAFASHALRERISERSLEIFDTGARYQMYHALALLLVALLISRTPTPPTTLLASGWLFIIGI
AIFSGSLYALSLTGIKILGAITPLGGVAFLLGWGALAVAAFSIKL

Specific function: Unknown

COG id: COG2363

COG function: function code S; Uncharacterized small membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0382 family [H]

Homologues:

Organism=Escherichia coli, GI1789172, Length=126, Percent_Identity=37.3015873015873, Blast_Score=70, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI193203406, Length=111, Percent_Identity=36.036036036036, Blast_Score=72, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006696 [H]

Pfam domain/function: PF04241 DUF423 [H]

EC number: NA

Molecular weight: Translated: 13131; Mature: 13000

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQIFVSIAAILGGLSVAAGAFASHALRERISERSLEIFDTGARYQMYHALALLLVALLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHH
SRTPTPPTTLLASGWLFIIGIAIFSGSLYALSLTGIKILGAITPLGGVAFLLGWGALAVA
CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
AFSIKL
HHHHCC
>Mature Secondary Structure 
TQIFVSIAAILGGLSVAAGAFASHALRERISERSLEIFDTGARYQMYHALALLLVALLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHH
SRTPTPPTTLLASGWLFIIGIAIFSGSLYALSLTGIKILGAITPLGGVAFLLGWGALAVA
CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
AFSIKL
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]