| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230602
Identifier: 17230602
GI number: 17230602
Start: 3761376
End: 3762185
Strand: Reverse
Name: 17230602
Synonym: all3110
Alternate gene names: NA
Gene position: 3762185-3761376 (Counterclockwise)
Preceding gene: 17230603
Following gene: 17230600
Centisome position: 58.66
GC content: 36.54
Gene sequence:
>810_bases GTGAGTTTTGATAATGTTTGTAAGGCGCTTGCAGAGAAATATCCAAAAGATTTTATCCGATGGTTAATTGGTGAAGAATC TACCAATGTTAAGGTTTTAAAAACTGAGTTAAGTTTAGAGCCTATTCGCGCAGATTCTGTGATTTTTTTACAAACTGGCA ATTTGATTTTGCATATTGAATTTCAGACTTTAACACAGTCTAATCCCGCGATTCCTTTCCGAATGCTGGATTATTCTGTG AGATTAAAACGTCAGTATAAGTGTCGAATTGTACAGGTGGTAATATTTTTGCAGGAGACAGATGATGAAATTGCTTTTAC TGAAGAGTATGTGAATGAGACAACTAGACATCGCTATCGTGCAGTCAGAATGTGGGAGCAAGATTCCAGCTTATTTTTGG GTAATTTGGCATTGTTACCATTAGCACCTTTGTGTCAAACTGATTCTCCAAGAGATTTAAGAATTTCAGATAGAGAGACA AGGCAAAATACAGCAGCCTACACCGAGATATTAGCTGGTTTGCGGTTTGAGAAGGGTTTGATTCGTCAGTTATTAAGCGA GGATATTATGCAGGAATCAGTTATTTATCAGGATATTTTGCAAAAGGGTGAGCAGAAGGGTGAGCAGAAAGAAGCTTTTC GCTTTTTAAATCGACAGTTAAATCGGCGCTTTGGTGAGATAGATTTATCAATAGTTGAGCGTATCAAAATATTATCTACT GAAGAGTTAGAAGCCTTGGGAGAAGAATTTTTAAGTTTTTCAAATGTATCTGATTTAGTTGCTTGGCTTGAGCGAAATAC GAGTAGTTAA
Upstream 100 bases:
>100_bases AAACAAGGTTAGTAAAGTCGAAAATATACCTCACCAACTCAGGAACCAGTATATCCCCATTTAATAATAATATAATCATG ATATTAACTTGGTTCTTATT
Downstream 100 bases:
>100_bases GTAATGTAGGTAAAATGTTTGTTTACAATGCCCACAGGCGATCGCTTCTGGGCAATCAAATACTGTCTCTATTCTTCACT AGAAAGCTTATCTAGCTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MSFDNVCKALAEKYPKDFIRWLIGEESTNVKVLKTELSLEPIRADSVIFLQTGNLILHIEFQTLTQSNPAIPFRMLDYSV RLKRQYKCRIVQVVIFLQETDDEIAFTEEYVNETTRHRYRAVRMWEQDSSLFLGNLALLPLAPLCQTDSPRDLRISDRET RQNTAAYTEILAGLRFEKGLIRQLLSEDIMQESVIYQDILQKGEQKGEQKEAFRFLNRQLNRRFGEIDLSIVERIKILST EELEALGEEFLSFSNVSDLVAWLERNTSS
Sequences:
>Translated_269_residues MSFDNVCKALAEKYPKDFIRWLIGEESTNVKVLKTELSLEPIRADSVIFLQTGNLILHIEFQTLTQSNPAIPFRMLDYSV RLKRQYKCRIVQVVIFLQETDDEIAFTEEYVNETTRHRYRAVRMWEQDSSLFLGNLALLPLAPLCQTDSPRDLRISDRET RQNTAAYTEILAGLRFEKGLIRQLLSEDIMQESVIYQDILQKGEQKGEQKEAFRFLNRQLNRRFGEIDLSIVERIKILST EELEALGEEFLSFSNVSDLVAWLERNTSS >Mature_268_residues SFDNVCKALAEKYPKDFIRWLIGEESTNVKVLKTELSLEPIRADSVIFLQTGNLILHIEFQTLTQSNPAIPFRMLDYSVR LKRQYKCRIVQVVIFLQETDDEIAFTEEYVNETTRHRYRAVRMWEQDSSLFLGNLALLPLAPLCQTDSPRDLRISDRETR QNTAAYTEILAGLRFEKGLIRQLLSEDIMQESVIYQDILQKGEQKGEQKEAFRFLNRQLNRRFGEIDLSIVERIKILSTE ELEALGEEFLSFSNVSDLVAWLERNTSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31365; Mature: 31234
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFDNVCKALAEKYPKDFIRWLIGEESTNVKVLKTELSLEPIRADSVIFLQTGNLILHIE CCHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEEEECCEEEEEE FQTLTQSNPAIPFRMLDYSVRLKRQYKCRIVQVVIFLQETDDEIAFTEEYVNETTRHRYR EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEHCCCCCCHHHHHHHHHHHHHHHHH AVRMWEQDSSLFLGNLALLPLAPLCQTDSPRDLRISDRETRQNTAAYTEILAGLRFEKGL HHHHHCCCCCEEECCCHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IRQLLSEDIMQESVIYQDILQKGEQKGEQKEAFRFLNRQLNRRFGEIDLSIVERIKILST HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCH EELEALGEEFLSFSNVSDLVAWLERNTSS HHHHHHHHHHHHHCCHHHHHHHHHHCCCC >Mature Secondary Structure SFDNVCKALAEKYPKDFIRWLIGEESTNVKVLKTELSLEPIRADSVIFLQTGNLILHIE CHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEEEECCEEEEEE FQTLTQSNPAIPFRMLDYSVRLKRQYKCRIVQVVIFLQETDDEIAFTEEYVNETTRHRYR EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEHCCCCCCHHHHHHHHHHHHHHHHH AVRMWEQDSSLFLGNLALLPLAPLCQTDSPRDLRISDRETRQNTAAYTEILAGLRFEKGL HHHHHCCCCCEEECCCHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IRQLLSEDIMQESVIYQDILQKGEQKGEQKEAFRFLNRQLNRRFGEIDLSIVERIKILST HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCH EELEALGEEFLSFSNVSDLVAWLERNTSS HHHHHHHHHHHHHCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA