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The map label for this gene is yibD [C]

Identifier: 17230555

GI number: 17230555

Start: 3711770

End: 3712762

Strand: Direct

Name: yibD [C]

Synonym: alr3063

Alternate gene names: 17230555

Gene position: 3711770-3712762 (Clockwise)

Preceding gene: 17230554

Following gene: 17230556

Centisome position: 57.87

GC content: 35.65

Gene sequence:

>993_bases
GTGAAAGATATGGCATTAATTTCTGTGATCATACCTGCTTACAATGCAGTATTGACTATTAAAGAAACAATCGAATCTGT
ACAAAAGCAGACTTTTACTGACTGGGAAATCATTGTTATTAATGATGGTTCTACAGATGGAACTCCAGAAATTATCCAAA
GTATCAAAGATGAGCGGTTAAAAATTTTTAACTATAAAAATGGTGGATTACCAGTAGCTCGTAATCGTGGTATTCTTCAT
GCAAGTGGAGAATTTATTGCTTTTCTTGATGCAGATGATTTATGGGCTGTTGATAAACTGGAAATGCAATTAAAAGCTTT
GCAACAGCACCCAGAAGCCGGAGTTGCCTACAGTTGGACTTGTTTTATGGATGTAAATGAACAAGGAGAACCTGTAGCAT
ATTTGCCATCATCTCAATATTCTTTTACCGGAAATGTTTATCAAAATCTATTAGTCAGTGATTTTATTCACAGTGGTTCC
AATACGTTAATACGTAAGGAGGCAATTAATTCAGTAGGCGAATTTGATCCAATGCTCAAATCCTGTGAAGATTGGGATTA
TTGGCTGCGCCTAGCAACTCATTGGGATTTTATTGTAGTCCCTGAATACCAAATATTTTATCGTCGGACTCCTGGGGCGA
TGTCATCTAAAGTTGAAGTGATGAAAGAAGCCTGTCTCATAGCAATGGAAAAGGCTTATCAAGCAGCACCACCAGAACTA
CAATATTTGAAAAAATATACTATGAGTAGCTTTCATGTCTACTGCTCAAGTTTGTATATTCAACATCGTGATGACAAATT
TGCAGTTAGTCAAGCGCAAGAACATTTGTTGGCAGCTATTAGATTAAATCAAAAGATTTTATTAGAGAAAACAACTCAAA
AGTTATTAATCAAGTTTCTCTTGAAAAAGATTTTTCCCCCACAGGTGACTAATTATGTTTTGCAGTTAACAAAACAACGT
ATTTCTCTGAGTGTTCCGAGGTTAGAAGCATGA

Upstream 100 bases:

>100_bases
GGCTATAGTAAATTGCTGCCATTATTTCACACTATGCGGCGGGTCAAGTTAGCTTTACAAAAGTAATGAGAGTAATCAAG
ACCAAAGCTAGTTATTTTCG

Downstream 100 bases:

>100_bases
AAAATATTCTCAATCAAGAACTTGCAGAGCCACAAAATACAGATACAAAAGAATTACAAATTCCAGAACCAACGATCGCC
TTACTCCACTGTTACGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MKDMALISVIIPAYNAVLTIKETIESVQKQTFTDWEIIVINDGSTDGTPEIIQSIKDERLKIFNYKNGGLPVARNRGILH
ASGEFIAFLDADDLWAVDKLEMQLKALQQHPEAGVAYSWTCFMDVNEQGEPVAYLPSSQYSFTGNVYQNLLVSDFIHSGS
NTLIRKEAINSVGEFDPMLKSCEDWDYWLRLATHWDFIVVPEYQIFYRRTPGAMSSKVEVMKEACLIAMEKAYQAAPPEL
QYLKKYTMSSFHVYCSSLYIQHRDDKFAVSQAQEHLLAAIRLNQKILLEKTTQKLLIKFLLKKIFPPQVTNYVLQLTKQR
ISLSVPRLEA

Sequences:

>Translated_330_residues
MKDMALISVIIPAYNAVLTIKETIESVQKQTFTDWEIIVINDGSTDGTPEIIQSIKDERLKIFNYKNGGLPVARNRGILH
ASGEFIAFLDADDLWAVDKLEMQLKALQQHPEAGVAYSWTCFMDVNEQGEPVAYLPSSQYSFTGNVYQNLLVSDFIHSGS
NTLIRKEAINSVGEFDPMLKSCEDWDYWLRLATHWDFIVVPEYQIFYRRTPGAMSSKVEVMKEACLIAMEKAYQAAPPEL
QYLKKYTMSSFHVYCSSLYIQHRDDKFAVSQAQEHLLAAIRLNQKILLEKTTQKLLIKFLLKKIFPPQVTNYVLQLTKQR
ISLSVPRLEA
>Mature_330_residues
MKDMALISVIIPAYNAVLTIKETIESVQKQTFTDWEIIVINDGSTDGTPEIIQSIKDERLKIFNYKNGGLPVARNRGILH
ASGEFIAFLDADDLWAVDKLEMQLKALQQHPEAGVAYSWTCFMDVNEQGEPVAYLPSSQYSFTGNVYQNLLVSDFIHSGS
NTLIRKEAINSVGEFDPMLKSCEDWDYWLRLATHWDFIVVPEYQIFYRRTPGAMSSKVEVMKEACLIAMEKAYQAAPPEL
QYLKKYTMSSFHVYCSSLYIQHRDDKFAVSQAQEHLLAAIRLNQKILLEKTTQKLLIKFLLKKIFPPQVTNYVLQLTKQR
ISLSVPRLEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=147, Percent_Identity=36.0544217687075, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1788372, Length=196, Percent_Identity=29.0816326530612, Blast_Score=78, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 37776; Mature: 37776

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDMALISVIIPAYNAVLTIKETIESVQKQTFTDWEIIVINDGSTDGTPEIIQSIKDERL
CCCHHHHHHHHHHHHHEEEHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCCE
KIFNYKNGGLPVARNRGILHASGEFIAFLDADDLWAVDKLEMQLKALQQHPEAGVAYSWT
EEEEECCCCCCEECCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEE
CFMDVNEQGEPVAYLPSSQYSFTGNVYQNLLVSDFIHSGSNTLIRKEAINSVGEFDPMLK
EEEEECCCCCCEEECCCCCCEEEHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCHHHH
SCEDWDYWLRLATHWDFIVVPEYQIFYRRTPGAMSSKVEVMKEACLIAMEKAYQAAPPEL
CCCCHHHHHHHHCCCCEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH
QYLKKYTMSSFHVYCSSLYIQHRDDKFAVSQAQEHLLAAIRLNQKILLEKTTQKLLIKFL
HHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LKKIFPPQVTNYVLQLTKQRISLSVPRLEA
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKDMALISVIIPAYNAVLTIKETIESVQKQTFTDWEIIVINDGSTDGTPEIIQSIKDERL
CCCHHHHHHHHHHHHHEEEHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCCE
KIFNYKNGGLPVARNRGILHASGEFIAFLDADDLWAVDKLEMQLKALQQHPEAGVAYSWT
EEEEECCCCCCEECCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEE
CFMDVNEQGEPVAYLPSSQYSFTGNVYQNLLVSDFIHSGSNTLIRKEAINSVGEFDPMLK
EEEEECCCCCCEEECCCCCCEEEHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCHHHH
SCEDWDYWLRLATHWDFIVVPEYQIFYRRTPGAMSSKVEVMKEACLIAMEKAYQAAPPEL
CCCCHHHHHHHHCCCCEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH
QYLKKYTMSSFHVYCSSLYIQHRDDKFAVSQAQEHLLAAIRLNQKILLEKTTQKLLIKFL
HHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LKKIFPPQVTNYVLQLTKQRISLSVPRLEA
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA