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The map label for this gene is yibD [C]

Identifier: 17230554

GI number: 17230554

Start: 3710770

End: 3711735

Strand: Direct

Name: yibD [C]

Synonym: alr3062

Alternate gene names: 17230554

Gene position: 3710770-3711735 (Clockwise)

Preceding gene: 17230553

Following gene: 17230555

Centisome position: 57.86

GC content: 36.96

Gene sequence:

>966_bases
ATGCCAAAAGTATCTGTAGTAATTCCAGCTTATAATGCGATGCCTTATTTACCAGAGACACTTGAAAGTGTTCTCAGGCA
AACTTATCACGATTTTGAAGTGGTAGTTGTGAATGATGGCAGTTCTGATAATACTGAGGAATGGGTATCTCAAATTTTAG
ATCCAAGATTAAAATTGATTTCTCAAGCAAATCAAGGATTAGCGGGAGCAAGAAATACTGGTATTGTTAATGCTTCAGGT
GAATATATTGCATTTCTGGATGCTGATGATATTTGGGAGCCAACTAAACTAGCAAAACAAGTTAGTGTTTTAGATGAAAA
TCCAACAGTCGGGTTGGTTTATACCTGGGTTGCTTATATTGATGAGCAGGGTAAATCAACAGGAAAAATATTTAAAAATC
AGGTAGAAGGTTATGTATGGCCACAGTTGACTGAACATAATATTGTTGAGTGTGGTAGTGTGGCGCTTGTACGTCGAGTG
TGTTTTGAAAAAATGGGTCTATTTGACCGCAATTTAGGCTCTTATGTAGAAGATTGGGATATGTGGCTACGCATTGCCAC
AAGTTATGATTTTAAAGTTGTTAAAGAAGCTTTAGTCTACTACAGACAACGCTCAAATAGTGCTTCTAAAAATTGGGAAG
CAATGGCACACAGTTTTGCTATAGTCATTGAAAAAGCTTTTGCGACTGCATCACAAGATTTACAGGTTTTAAAAAATAAA
AGTTATGGTTTTACTTACCTTTGCCTAGCTTGGAAACCACTACAAAGTTTTCAAAAAGATTATCAAAAATCTCGTGAGTT
TTGTCAGCAAGCTGTGGCTTATTATCCCAGTTTACGCTTTTCCCAAGAGTATATCCGCTTGAGTATAGCTATTAATCTCA
TGCGATGGTTTGGGGCTGACGGCTATAGTAAATTGCTGCCATTATTTCACACTATGCGGCGGGTCAAGTTAGCTTTACAA
AAGTAA

Upstream 100 bases:

>100_bases
TGCTTTTCAACCTAGAAAAACAGCCAATGCTTAGATAGTTTAAAACATTAATTTCTAATCGGATTTTTACGGTTCTCATT
ATTAAGAAAAAAGCTAATAT

Downstream 100 bases:

>100_bases
TGAGAGTAATCAAGACCAAAGCTAGTTATTTTCGGTGAAAGATATGGCATTAATTTCTGTGATCATACCTGCTTACAATG
CAGTATTGACTATTAAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MPKVSVVIPAYNAMPYLPETLESVLRQTYHDFEVVVVNDGSSDNTEEWVSQILDPRLKLISQANQGLAGARNTGIVNASG
EYIAFLDADDIWEPTKLAKQVSVLDENPTVGLVYTWVAYIDEQGKSTGKIFKNQVEGYVWPQLTEHNIVECGSVALVRRV
CFEKMGLFDRNLGSYVEDWDMWLRIATSYDFKVVKEALVYYRQRSNSASKNWEAMAHSFAIVIEKAFATASQDLQVLKNK
SYGFTYLCLAWKPLQSFQKDYQKSREFCQQAVAYYPSLRFSQEYIRLSIAINLMRWFGADGYSKLLPLFHTMRRVKLALQ
K

Sequences:

>Translated_321_residues
MPKVSVVIPAYNAMPYLPETLESVLRQTYHDFEVVVVNDGSSDNTEEWVSQILDPRLKLISQANQGLAGARNTGIVNASG
EYIAFLDADDIWEPTKLAKQVSVLDENPTVGLVYTWVAYIDEQGKSTGKIFKNQVEGYVWPQLTEHNIVECGSVALVRRV
CFEKMGLFDRNLGSYVEDWDMWLRIATSYDFKVVKEALVYYRQRSNSASKNWEAMAHSFAIVIEKAFATASQDLQVLKNK
SYGFTYLCLAWKPLQSFQKDYQKSREFCQQAVAYYPSLRFSQEYIRLSIAINLMRWFGADGYSKLLPLFHTMRRVKLALQ
K
>Mature_320_residues
PKVSVVIPAYNAMPYLPETLESVLRQTYHDFEVVVVNDGSSDNTEEWVSQILDPRLKLISQANQGLAGARNTGIVNASGE
YIAFLDADDIWEPTKLAKQVSVLDENPTVGLVYTWVAYIDEQGKSTGKIFKNQVEGYVWPQLTEHNIVECGSVALVRRVC
FEKMGLFDRNLGSYVEDWDMWLRIATSYDFKVVKEALVYYRQRSNSASKNWEAMAHSFAIVIEKAFATASQDLQVLKNKS
YGFTYLCLAWKPLQSFQKDYQKSREFCQQAVAYYPSLRFSQEYIRLSIAINLMRWFGADGYSKLLPLFHTMRRVKLALQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI57770468, Length=116, Percent_Identity=32.7586206896552, Blast_Score=69, Evalue=5e-12,
Organism=Escherichia coli, GI1790044, Length=95, Percent_Identity=44.2105263157895, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1788372, Length=198, Percent_Identity=26.7676767676768, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787259, Length=119, Percent_Identity=37.8151260504202, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 36819; Mature: 36688

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKVSVVIPAYNAMPYLPETLESVLRQTYHDFEVVVVNDGSSDNTEEWVSQILDPRLKLI
CCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH
SQANQGLAGARNTGIVNASGEYIAFLDADDIWEPTKLAKQVSVLDENPTVGLVYTWVAYI
HHHCCCCCCCCCCCEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
DEQGKSTGKIFKNQVEGYVWPQLTEHNIVECGSVALVRRVCFEKMGLFDRNLGSYVEDWD
HHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHH
MWLRIATSYDFKVVKEALVYYRQRSNSASKNWEAMAHSFAIVIEKAFATASQDLQVLKNK
HHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SYGFTYLCLAWKPLQSFQKDYQKSREFCQQAVAYYPSLRFSQEYIRLSIAINLMRWFGAD
CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC
GYSKLLPLFHTMRRVKLALQK
CHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PKVSVVIPAYNAMPYLPETLESVLRQTYHDFEVVVVNDGSSDNTEEWVSQILDPRLKLI
CCEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH
SQANQGLAGARNTGIVNASGEYIAFLDADDIWEPTKLAKQVSVLDENPTVGLVYTWVAYI
HHHCCCCCCCCCCCEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
DEQGKSTGKIFKNQVEGYVWPQLTEHNIVECGSVALVRRVCFEKMGLFDRNLGSYVEDWD
HHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHH
MWLRIATSYDFKVVKEALVYYRQRSNSASKNWEAMAHSFAIVIEKAFATASQDLQVLKNK
HHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SYGFTYLCLAWKPLQSFQKDYQKSREFCQQAVAYYPSLRFSQEYIRLSIAINLMRWFGAD
CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC
GYSKLLPLFHTMRRVKLALQK
CHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA