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The map label for this gene is perM [C]

Identifier: 17230438

GI number: 17230438

Start: 3583851

End: 3584954

Strand: Direct

Name: perM [C]

Synonym: alr2946

Alternate gene names: 17230438

Gene position: 3583851-3584954 (Clockwise)

Preceding gene: 17230437

Following gene: 17230439

Centisome position: 55.88

GC content: 35.78

Gene sequence:

>1104_bases
ATGAATATTTCACTCAATCAATTGATTAAATGGTTAATAATAACCCTACTGTTTCCTCTGGTTTGTTTAAATGGTTGGTT
AGTTTTTGCATTTTTCCAGTATTTTCAACCGTTAGTGACAATATTTGTCCTGGCAATATTACTGGCATTTGTTTTAAACT
ACCCTGTTTCTGCTCTTCAGAAACGGGGTATTAAACGTAGTAATGCAGTAGGATTAGTTTTTGTTCTGACTGTGATTATT
TTAATTGCTTCAGGTGTCACCTTATTACCCATAGCAATAGAGCAATTCCATGAAATTGCTAAAATTTTACCCTTATGGAT
TGATTCTAGCCAAGAAAAACTACAAAACTTAAACGATTGGGCTATTGGTCAACATTTCAAGTTGAATATAGGGCAGATAT
TAACACGGATTATTGATAAAATTCCTGATGAATTGGAGTCTGTTTCTAATCAAACTTTTAAGATTATTGTAGAAACAGTT
GATAGTATATCCGAAGCTATAGTTACAGTTGTGATCACTTTTTATCTGTTAGTAGATGGGCAAAGAATTTGGGAAGGAAT
ATTTAAAAAATTACCGATGTCTTTGGCTCAAAAGTTAAAACAATCTATTCAGAAGAATTTTCAAAATTATTTGATTGGAC
AAGGGACTTTAGCTTTACTGATGGGAACCTCTCAAACTCTTTTGTTTTTAGCTTTTCAAGTGCAGTTTGGGTTACTGTTT
GGCTTAGGAGTTGGGTTTTTAAGCTTAATTCCTTTCGGTGATGTTGTTAGCTTGATTGTGATTACTTTAATCGTAGCTAC
CCATGACTTTTGGTTAGCGTTGAAGATTTTAGCAGTAGCAGTTGTCATTGATCAAATTATTGATCAGGCGATCGCACCCC
GCCTTTTAGGTAGTTTTACAGGACTGCGACCTATTTGGGTGTTAGTTTCTTTGCTTGTGGGGACATACATTGGCGGTTTG
CTAGGATTGCTAATTGCTGTCCCTGTCGCTGGTTTAATCAAAGATGCAGTCGATGGTTTCCCATCCTTAACTACTGGTAT
TGAGAACGTTTTACCGACCGAAACCACGACAGAAGTCTTAAGTCCAGAATCAACGTCATCATGA

Upstream 100 bases:

>100_bases
ATTTATGTAGGGTGGGTATTACCCATCGGCTCATGGTTTTGGTGGGCAATACCCAGCCTACACATACTTATATTTTTCAA
CAATCAAATCTGATTTATAT

Downstream 100 bases:

>100_bases
GGTGATGTAACTATTTTTATATAGGCGATTAGCAAAGCTAGGCGTTCCGCTATCGCCTAACTTATGTTTTCTTGAGTTTT
CACCTGATTTGCTTCGGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MNISLNQLIKWLIITLLFPLVCLNGWLVFAFFQYFQPLVTIFVLAILLAFVLNYPVSALQKRGIKRSNAVGLVFVLTVII
LIASGVTLLPIAIEQFHEIAKILPLWIDSSQEKLQNLNDWAIGQHFKLNIGQILTRIIDKIPDELESVSNQTFKIIVETV
DSISEAIVTVVITFYLLVDGQRIWEGIFKKLPMSLAQKLKQSIQKNFQNYLIGQGTLALLMGTSQTLLFLAFQVQFGLLF
GLGVGFLSLIPFGDVVSLIVITLIVATHDFWLALKILAVAVVIDQIIDQAIAPRLLGSFTGLRPIWVLVSLLVGTYIGGL
LGLLIAVPVAGLIKDAVDGFPSLTTGIENVLPTETTTEVLSPESTSS

Sequences:

>Translated_367_residues
MNISLNQLIKWLIITLLFPLVCLNGWLVFAFFQYFQPLVTIFVLAILLAFVLNYPVSALQKRGIKRSNAVGLVFVLTVII
LIASGVTLLPIAIEQFHEIAKILPLWIDSSQEKLQNLNDWAIGQHFKLNIGQILTRIIDKIPDELESVSNQTFKIIVETV
DSISEAIVTVVITFYLLVDGQRIWEGIFKKLPMSLAQKLKQSIQKNFQNYLIGQGTLALLMGTSQTLLFLAFQVQFGLLF
GLGVGFLSLIPFGDVVSLIVITLIVATHDFWLALKILAVAVVIDQIIDQAIAPRLLGSFTGLRPIWVLVSLLVGTYIGGL
LGLLIAVPVAGLIKDAVDGFPSLTTGIENVLPTETTTEVLSPESTSS
>Mature_367_residues
MNISLNQLIKWLIITLLFPLVCLNGWLVFAFFQYFQPLVTIFVLAILLAFVLNYPVSALQKRGIKRSNAVGLVFVLTVII
LIASGVTLLPIAIEQFHEIAKILPLWIDSSQEKLQNLNDWAIGQHFKLNIGQILTRIIDKIPDELESVSNQTFKIIVETV
DSISEAIVTVVITFYLLVDGQRIWEGIFKKLPMSLAQKLKQSIQKNFQNYLIGQGTLALLMGTSQTLLFLAFQVQFGLLF
GLGVGFLSLIPFGDVVSLIVITLIVATHDFWLALKILAVAVVIDQIIDQAIAPRLLGSFTGLRPIWVLVSLLVGTYIGGL
LGLLIAVPVAGLIKDAVDGFPSLTTGIENVLPTETTTEVLSPESTSS

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=329, Percent_Identity=25.2279635258359, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 40337; Mature: 40337

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCC
>Mature Secondary Structure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CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]