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The map label for this gene is trpH [C]

Identifier: 17230432

GI number: 17230432

Start: 3577944

End: 3578630

Strand: Direct

Name: trpH [C]

Synonym: alr2940

Alternate gene names: 17230432

Gene position: 3577944-3578630 (Clockwise)

Preceding gene: 17230431

Following gene: 17230435

Centisome position: 55.79

GC content: 41.92

Gene sequence:

>687_bases
ATGGTTATAAATTTTGCTCGAACATCTGCTTCCACCGAACTATTAAAGCAAGTATTTCAGACAATTGATGCTCAAAGTTG
TCCGAAGTTATTTAATTTTCATATGCACACTGTTTATTCGGATGGTAGATTGCAGCCAAGTGTGTTGATGGAGCAGGCGA
TCGCTATCGGACTACAAGGTTTTGCAATCACTGATCATCATACTGTAGGTGGGTATGAAGCAGCGCAAGCTTGGTTAGAA
AACTGGAAATGGAACAATCCGGGTGTAACAACTCCTCACCTGTGGAGTGGTGTAGAAATTAATGCCAATTTATTGGATGT
AGAGGTTCACATTTTGGCTTATGCTTTCCAGCCAGAACATTTTAGTCTGAAACCTTATCTGCAAAGAAAGATAACAACCG
ATAGAGAATATCAAGCAGGTAACGTAATTGAGGCCATTCATGCAGCCGGAGGGATAGCGGTATTGGCGCATCCAGCACGT
TATCGAAAATCTCACTTCGATTTGATTCCGGCGGCTGCTGGATATGGGATTGATGGTGTAGAAACATATTACGCCTACAA
CAACCCCAACCCGTGGAAACCCAGTGTGATTGAATCAGAACAAATACAAAATCTAGCCAAAGAGTATGGCATTTTCAATA
CTTGCGGTACTGATACCCACGGTTTAAGCTTACTCCAACGGTTATAA

Upstream 100 bases:

>100_bases
CTGCTAATTGGCACTAATCTAACGTGCTAAGTATTTCTCTTTTATTTAAGTGTGATGTGCTGGTCTGTGAGAAATCGAGT
ATTTTTATTCAGAGAGGGTT

Downstream 100 bases:

>100_bases
AGATGCGTTCCGCTTGCACAAAACTCCTGGTGTAAACAGCCAGGGGCGACTAATCACAAGTGCTACGATGAGTATCACAG
TCACTTCCTAATCTTGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Metal-Dependent Phosphoesterase; PHP Domain Protein; PHP Family Metal-Dependent Phosphoesterase; Phosphoesterase PHP-Like; PHP Domain-Containing Protein; Phosphoesterase PHP N-TerminalPHP

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MVINFARTSASTELLKQVFQTIDAQSCPKLFNFHMHTVYSDGRLQPSVLMEQAIAIGLQGFAITDHHTVGGYEAAQAWLE
NWKWNNPGVTTPHLWSGVEINANLLDVEVHILAYAFQPEHFSLKPYLQRKITTDREYQAGNVIEAIHAAGGIAVLAHPAR
YRKSHFDLIPAAAGYGIDGVETYYAYNNPNPWKPSVIESEQIQNLAKEYGIFNTCGTDTHGLSLLQRL

Sequences:

>Translated_228_residues
MVINFARTSASTELLKQVFQTIDAQSCPKLFNFHMHTVYSDGRLQPSVLMEQAIAIGLQGFAITDHHTVGGYEAAQAWLE
NWKWNNPGVTTPHLWSGVEINANLLDVEVHILAYAFQPEHFSLKPYLQRKITTDREYQAGNVIEAIHAAGGIAVLAHPAR
YRKSHFDLIPAAAGYGIDGVETYYAYNNPNPWKPSVIESEQIQNLAKEYGIFNTCGTDTHGLSLLQRL
>Mature_228_residues
MVINFARTSASTELLKQVFQTIDAQSCPKLFNFHMHTVYSDGRLQPSVLMEQAIAIGLQGFAITDHHTVGGYEAAQAWLE
NWKWNNPGVTTPHLWSGVEINANLLDVEVHILAYAFQPEHFSLKPYLQRKITTDREYQAGNVIEAIHAAGGIAVLAHPAR
YRKSHFDLIPAAAGYGIDGVETYYAYNNPNPWKPSVIESEQIQNLAKEYGIFNTCGTDTHGLSLLQRL

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25467; Mature: 25467

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVINFARTSASTELLKQVFQTIDAQSCPKLFNFHMHTVYSDGRLQPSVLMEQAIAIGLQG
CEEEECCCCHHHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCC
FAITDHHTVGGYEAAQAWLENWKWNNPGVTTPHLWSGVEINANLLDVEVHILAYAFQPEH
EEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCEEEEEEEEEEEEEECCCC
FSLKPYLQRKITTDREYQAGNVIEAIHAAGGIAVLAHPARYRKSHFDLIPAAAGYGIDGV
CCCCHHHHHHCCCCCCCCCCCHHHHHHHCCCEEEEECCHHHHHHHCCEECCCCCCCCCCC
ETYYAYNNPNPWKPSVIESEQIQNLAKEYGIFNTCGTDTHGLSLLQRL
EEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC
>Mature Secondary Structure
MVINFARTSASTELLKQVFQTIDAQSCPKLFNFHMHTVYSDGRLQPSVLMEQAIAIGLQG
CEEEECCCCHHHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCC
FAITDHHTVGGYEAAQAWLENWKWNNPGVTTPHLWSGVEINANLLDVEVHILAYAFQPEH
EEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCEEEEEEEEEEEEEECCCC
FSLKPYLQRKITTDREYQAGNVIEAIHAAGGIAVLAHPARYRKSHFDLIPAAAGYGIDGV
CCCCHHHHHHCCCCCCCCCCCHHHHHHHCCCEEEEECCHHHHHHHCCEECCCCCCCCCCC
ETYYAYNNPNPWKPSVIESEQIQNLAKEYGIFNTCGTDTHGLSLLQRL
EEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA