| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is hetP
Identifier: 17230394
GI number: 17230394
Start: 3542511
End: 3542921
Strand: Direct
Name: hetP
Synonym: alr2902
Alternate gene names: NA
Gene position: 3542511-3542921 (Clockwise)
Preceding gene: 17230393
Following gene: 17230395
Centisome position: 55.23
GC content: 36.01
Gene sequence:
>411_bases ATGAGCTACCACATAAATTCTTCCCAAAATCGGTTTCACAAAATAATTACGACTGAACAATTGAATCAAGTCATCGAAGC TATTACTGATGGAAGATATTCTTGGGCTTGTGTTTTAATTTTACGTTTTGTTGGGTACAATCCTCTTCACTTTATTCCCC AACGGACTTATAGCCGTCTTATGAAGGACAATAGACAAGTTGCCAATATACCTGGTTCATTAAATAATGGAAAATCCATA AGTGCCAATTCCCCCATAACTAACTCTAGCGTAGTTAATAAAGCTTCTACTCAGGATTTAAACCAGTCGAATAATTCTGA TTACTTAACCACTCCTGAACCAGATAAGAGGGGAAATATTCCAGGGTATTTAGAAACAAAAATGGCAGTAATGTATAGCC GGAATCAATAG
Upstream 100 bases:
>100_bases TTAATTGCGGATAGTTTATTTTTTGATGTTCCATAAACAGCTAAAAACTGGTGGAATCAGTCTATAAATTTCATATTTAG ATAAATATCTCCAAGACACT
Downstream 100 bases:
>100_bases AAAGCAGAATTTATGTACCCAGGTCGTCTGTTGAGACTGGGTGTAAGGGGGTAAGGGTATAGGGGCGTAAATACTTAAAA CCCTTACACCCCTGTTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Heterocyst Formation Protein HetP-Like Protein; HetP Protein
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MSYHINSSQNRFHKIITTEQLNQVIEAITDGRYSWACVLILRFVGYNPLHFIPQRTYSRLMKDNRQVANIPGSLNNGKSI SANSPITNSSVVNKASTQDLNQSNNSDYLTTPEPDKRGNIPGYLETKMAVMYSRNQ
Sequences:
>Translated_136_residues MSYHINSSQNRFHKIITTEQLNQVIEAITDGRYSWACVLILRFVGYNPLHFIPQRTYSRLMKDNRQVANIPGSLNNGKSI SANSPITNSSVVNKASTQDLNQSNNSDYLTTPEPDKRGNIPGYLETKMAVMYSRNQ >Mature_135_residues SYHINSSQNRFHKIITTEQLNQVIEAITDGRYSWACVLILRFVGYNPLHFIPQRTYSRLMKDNRQVANIPGSLNNGKSIS ANSPITNSSVVNKASTQDLNQSNNSDYLTTPEPDKRGNIPGYLETKMAVMYSRNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15411; Mature: 15279
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYHINSSQNRFHKIITTEQLNQVIEAITDGRYSWACVLILRFVGYNPLHFIPQRTYSRL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHCCHHHHHHH MKDNRQVANIPGSLNNGKSISANSPITNSSVVNKASTQDLNQSNNSDYLTTPEPDKRGNI HHCCCEEECCCCCCCCCCEECCCCCCCCCHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCC PGYLETKMAVMYSRNQ CCHHHHHEEEEEECCC >Mature Secondary Structure SYHINSSQNRFHKIITTEQLNQVIEAITDGRYSWACVLILRFVGYNPLHFIPQRTYSRL CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHCCHHHHHHH MKDNRQVANIPGSLNNGKSISANSPITNSSVVNKASTQDLNQSNNSDYLTTPEPDKRGNI HHCCCEEECCCCCCCCCCEECCCCCCCCCHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCC PGYLETKMAVMYSRNQ CCHHHHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA