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The map label for this gene is 17230379

Identifier: 17230379

GI number: 17230379

Start: 3525097

End: 3527325

Strand: Direct

Name: 17230379

Synonym: alr2887

Alternate gene names: NA

Gene position: 3525097-3527325 (Clockwise)

Preceding gene: 17230378

Following gene: 17230380

Centisome position: 54.96

GC content: 46.12

Gene sequence:

>2229_bases
GTGAAAGGACAACACTTATTCTATAGTTTCTTGCCTGGTGTAACAGCAGCAGTATTGACGACTCAGCCAGCTGTGGCTGA
AGCCATGAAAGTAAGTAGTGTACAACTTGTGCCTTCTTCTAGTGTTGTGGCTACTCAAAATAGTCAAACTTTGCTAGTAG
ACAAAAGTCAGACACAACTGCCTAATGCTACAGTCCAGATTTTTCCAGACATCATTCCCACTTCTGGTGTGACTACACCA
AATTTACAATTTTCCAGTAGTCACAGTCACCCAATAATCTTGACAGAAAATACTGGTATCGATAGAGAACAAAAATCTCG
ACAAGATGAAGTTAAAAATTTCCCTCTCAAATCTAAACTGACTCTTTCTCAAAGGCTAAAACAAAGGCGTTTTTCCAGCC
AACAAAAACAAATTAACTCAGGGATTACTAAACCGAAATTAGTAACAAAAGTAGTTTCTACTACCTCCTCTACCCTGCTG
GCTGGACAACAAACTTTTTCTCCGTCTTATTTACAAAATCCTGCGCCACAGGAAAAACTGAAAACCCAGTTACCAATGCT
TTTGCAGACCAAAGCAAATCATGTCGGCGCAGCAAAACTCTTAAATATCAGCAGTTGCTCACCACAAACTTGTCAACTGA
CCAAGCTAACTGGACAGCAGATAGCTCAGGGTAATACTACACAAGACCCTGCTTCTGTTCCTGTACCGGACGAATCAACG
CTAGTAGATACTCAAGCACCGACAGATACTCCTGTACCGAACGAATCAGCACCGACAGATACTCCTGTATCGACTGAATC
AGCACCAGCAGATACTCAGTCACCAAGAGTTGCACCTGTCCAGACGGAATCAGCGCCAGTCAATACTCAAGCACCTGCGG
GTGCTGTAGAAGTGCCGCAAAACCTGATTCCCAATGCCAATCCTCTGCAATTTCCCACCAAACCAGAAGAAGTGACACTC
AAGGAGAATCAGCCGATTACCTTGACACAAGCGCTGGAACTGGCACGGCGGAGCAATCGGGATTTACAAGTTTCTTTGTT
GGAACTGCAACGCACTCAAGCCTTGCTAAAAGAAGCACAGGCCGCTTTATTACCCAACTTATCTGTCAGTAGTGACGTTA
CCCGCAGTCAGTCTGCAAGCGGTCAACTTCAGGACGAATTGATTAGTAAGCAGGGAGGAGTTGGCAACAACGATGAACCT
GGTACAGCCTTTAATAGCCAAGCACAATTATCCTACGACCTTTATACTTCTGGGAGAAGGAAAGCTGCTATTCAAGAAGC
TGAGGAACAGGTACGTTTTAATGAGTTGGATGTAGAGCGCCAGTCAGAAGAAATTCGCCTGAGTGTGACTAGAGCATATT
ACGACTTGCAACAGGCAGATGAACAAGTCCGTATTGCTCGGTCGGCTGTGGAAAATGCCCAAGCTAGCTTGCGAGATGCG
GAAGCCTTAGAAAGGGCTGGGGTGGGTACTAGATTTGATGTGCTGCGATCGCAAGTAAACTTAGCTAATAACACCCAACA
GCTAACAAATAACCTGTCTCGGCAACAAACGACTCGTCGTCAACTAGCAACCCTGTTAAGCGTTCCTCAGGCTGTAAATA
TCAGCGCTGCCGACCCTGTACAATTAGCAGGGCTGTGGAACCAATCCCTAGAACAAAGCATCATCCTCGCCTATCAAAAC
CGTCCCGAATTGCATCAGCAATTGGCACAAAGAAACATCAGCGAGCAACAACGCCGGCAAGCATTAGCAACCTTGGGGCC
ACAAGTCAGCTTTGTTGCTAACTACAACCTGCTCGATCAGTTTGATGATGGTGTCGGTCTGACTGACGGTTATTCTGTCG
GCGTGAGGGCGACCTTAAACTTGTACGATGGTGGAGCCGCTAGAGCCAGAGCATCCCAAGCTAGAGCTAATATTGCGATC
GCCGAAACTCGATTTGCTAGCCAGCGAGACCAAGTCCGCTTCCAAGTAGAGCAGGCCTTTACCAACCAACGCTCCAACTT
AGAAAACGTGCAAACTGCCAATGTTGCCTTAGAACAGGCTAGAGAAGCACTGCGTCTAGCGCGGTTGCGTTTCCAAGCTG
GTGTAGGCACTCAAACAGATGTGATTAACTCAGAAAATGACTTAACACAAGCTGAAGGTAACAGAATCACGGCAATTCTC
GATTACAACCGCGCCTTAGCTGAACTACAACGTGCTGTCACTTCTAGAGCATTAATTAGTAGTCAGTAG

Upstream 100 bases:

>100_bases
GGTATCGTACTATATTCCTCTTTAAATTTAGTATCGTGCTATATTCTGTGGTGAAGAAAAGTTTTCTGCCGCCAGATTAA
TTTTCGTGTGAGGGGATGCG

Downstream 100 bases:

>100_bases
TCGGTAGTCAGTAGTCATTAGTCAACGGTCATTAGTCAACGGTCAACTGACTATAAACTATGGACTATGCACTACTGATT
ATTTACTCATGACTACAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: RND Family Outer Membrane Efflux Protein; Outer Membrane Protein-Like; Tranporter Outer Membrane Factor Family; Outer Membrane Efflux Family Protein

Number of amino acids: Translated: 742; Mature: 742

Protein sequence:

>742_residues
MKGQHLFYSFLPGVTAAVLTTQPAVAEAMKVSSVQLVPSSSVVATQNSQTLLVDKSQTQLPNATVQIFPDIIPTSGVTTP
NLQFSSSHSHPIILTENTGIDREQKSRQDEVKNFPLKSKLTLSQRLKQRRFSSQQKQINSGITKPKLVTKVVSTTSSTLL
AGQQTFSPSYLQNPAPQEKLKTQLPMLLQTKANHVGAAKLLNISSCSPQTCQLTKLTGQQIAQGNTTQDPASVPVPDEST
LVDTQAPTDTPVPNESAPTDTPVSTESAPADTQSPRVAPVQTESAPVNTQAPAGAVEVPQNLIPNANPLQFPTKPEEVTL
KENQPITLTQALELARRSNRDLQVSLLELQRTQALLKEAQAALLPNLSVSSDVTRSQSASGQLQDELISKQGGVGNNDEP
GTAFNSQAQLSYDLYTSGRRKAAIQEAEEQVRFNELDVERQSEEIRLSVTRAYYDLQQADEQVRIARSAVENAQASLRDA
EALERAGVGTRFDVLRSQVNLANNTQQLTNNLSRQQTTRRQLATLLSVPQAVNISAADPVQLAGLWNQSLEQSIILAYQN
RPELHQQLAQRNISEQQRRQALATLGPQVSFVANYNLLDQFDDGVGLTDGYSVGVRATLNLYDGGAARARASQARANIAI
AETRFASQRDQVRFQVEQAFTNQRSNLENVQTANVALEQAREALRLARLRFQAGVGTQTDVINSENDLTQAEGNRITAIL
DYNRALAELQRAVTSRALISSQ

Sequences:

>Translated_742_residues
MKGQHLFYSFLPGVTAAVLTTQPAVAEAMKVSSVQLVPSSSVVATQNSQTLLVDKSQTQLPNATVQIFPDIIPTSGVTTP
NLQFSSSHSHPIILTENTGIDREQKSRQDEVKNFPLKSKLTLSQRLKQRRFSSQQKQINSGITKPKLVTKVVSTTSSTLL
AGQQTFSPSYLQNPAPQEKLKTQLPMLLQTKANHVGAAKLLNISSCSPQTCQLTKLTGQQIAQGNTTQDPASVPVPDEST
LVDTQAPTDTPVPNESAPTDTPVSTESAPADTQSPRVAPVQTESAPVNTQAPAGAVEVPQNLIPNANPLQFPTKPEEVTL
KENQPITLTQALELARRSNRDLQVSLLELQRTQALLKEAQAALLPNLSVSSDVTRSQSASGQLQDELISKQGGVGNNDEP
GTAFNSQAQLSYDLYTSGRRKAAIQEAEEQVRFNELDVERQSEEIRLSVTRAYYDLQQADEQVRIARSAVENAQASLRDA
EALERAGVGTRFDVLRSQVNLANNTQQLTNNLSRQQTTRRQLATLLSVPQAVNISAADPVQLAGLWNQSLEQSIILAYQN
RPELHQQLAQRNISEQQRRQALATLGPQVSFVANYNLLDQFDDGVGLTDGYSVGVRATLNLYDGGAARARASQARANIAI
AETRFASQRDQVRFQVEQAFTNQRSNLENVQTANVALEQAREALRLARLRFQAGVGTQTDVINSENDLTQAEGNRITAIL
DYNRALAELQRAVTSRALISSQ
>Mature_742_residues
MKGQHLFYSFLPGVTAAVLTTQPAVAEAMKVSSVQLVPSSSVVATQNSQTLLVDKSQTQLPNATVQIFPDIIPTSGVTTP
NLQFSSSHSHPIILTENTGIDREQKSRQDEVKNFPLKSKLTLSQRLKQRRFSSQQKQINSGITKPKLVTKVVSTTSSTLL
AGQQTFSPSYLQNPAPQEKLKTQLPMLLQTKANHVGAAKLLNISSCSPQTCQLTKLTGQQIAQGNTTQDPASVPVPDEST
LVDTQAPTDTPVPNESAPTDTPVSTESAPADTQSPRVAPVQTESAPVNTQAPAGAVEVPQNLIPNANPLQFPTKPEEVTL
KENQPITLTQALELARRSNRDLQVSLLELQRTQALLKEAQAALLPNLSVSSDVTRSQSASGQLQDELISKQGGVGNNDEP
GTAFNSQAQLSYDLYTSGRRKAAIQEAEEQVRFNELDVERQSEEIRLSVTRAYYDLQQADEQVRIARSAVENAQASLRDA
EALERAGVGTRFDVLRSQVNLANNTQQLTNNLSRQQTTRRQLATLLSVPQAVNISAADPVQLAGLWNQSLEQSIILAYQN
RPELHQQLAQRNISEQQRRQALATLGPQVSFVANYNLLDQFDDGVGLTDGYSVGVRATLNLYDGGAARARASQARANIAI
AETRFASQRDQVRFQVEQAFTNQRSNLENVQTANVALEQAREALRLARLRFQAGVGTQTDVINSENDLTQAEGNRITAIL
DYNRALAELQRAVTSRALISSQ

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80839; Mature: 80839

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGQHLFYSFLPGVTAAVLTTQPAVAEAMKVSSVQLVPSSSVVATQNSQTLLVDKSQTQL
CCCCEEHHHHHCCHHHHHHCCCHHHHHHHHHCCEEECCCCCEEEECCCCEEEEECCHHCC
PNATVQIFPDIIPTSGVTTPNLQFSSSHSHPIILTENTGIDREQKSRQDEVKNFPLKSKL
CCCEEEEECCCCCCCCCCCCCEEECCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHH
TLSQRLKQRRFSSQQKQINSGITKPKLVTKVVSTTSSTLLAGQQTFSPSYLQNPAPQEKL
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHEECCCCCCCHHHCCCCCHHHH
KTQLPMLLQTKANHVGAAKLLNISSCSPQTCQLTKLTGQQIAQGNTTQDPASVPVPDEST
HHHCCHHHHHHCCCCCHHHEEECCCCCCCCEEEEHHCHHHHHCCCCCCCCCCCCCCCCCC
LVDTQAPTDTPVPNESAPTDTPVSTESAPADTQSPRVAPVQTESAPVNTQAPAGAVEVPQ
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHCCH
NLIPNANPLQFPTKPEEVTLKENQPITLTQALELARRSNRDLQVSLLELQRTQALLKEAQ
HHCCCCCCCCCCCCCCCEEECCCCCEEHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH
AALLPNLSVSSDVTRSQSASGQLQDELISKQGGVGNNDEPGTAFNSQAQLSYDLYTSGRR
HHHCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCH
KAAIQEAEEQVRFNELDVERQSEEIRLSVTRAYYDLQQADEQVRIARSAVENAQASLRDA
HHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EALERAGVGTRFDVLRSQVNLANNTQQLTNNLSRQQTTRRQLATLLSVPQAVNISAADPV
HHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
QLAGLWNQSLEQSIILAYQNRPELHQQLAQRNISEQQRRQALATLGPQVSFVANYNLLDQ
HHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCHHHH
FDDGVGLTDGYSVGVRATLNLYDGGAARARASQARANIAIAETRFASQRDQVRFQVEQAF
CCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCEEEEHHHHHCCHHHHHHHHHHHH
TNQRSNLENVQTANVALEQAREALRLARLRFQAGVGTQTDVINSENDLTQAEGNRITAIL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHCCCCEEEEEE
DYNRALAELQRAVTSRALISSQ
ECHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKGQHLFYSFLPGVTAAVLTTQPAVAEAMKVSSVQLVPSSSVVATQNSQTLLVDKSQTQL
CCCCEEHHHHHCCHHHHHHCCCHHHHHHHHHCCEEECCCCCEEEECCCCEEEEECCHHCC
PNATVQIFPDIIPTSGVTTPNLQFSSSHSHPIILTENTGIDREQKSRQDEVKNFPLKSKL
CCCEEEEECCCCCCCCCCCCCEEECCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHH
TLSQRLKQRRFSSQQKQINSGITKPKLVTKVVSTTSSTLLAGQQTFSPSYLQNPAPQEKL
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHEECCCCCCCHHHCCCCCHHHH
KTQLPMLLQTKANHVGAAKLLNISSCSPQTCQLTKLTGQQIAQGNTTQDPASVPVPDEST
HHHCCHHHHHHCCCCCHHHEEECCCCCCCCEEEEHHCHHHHHCCCCCCCCCCCCCCCCCC
LVDTQAPTDTPVPNESAPTDTPVSTESAPADTQSPRVAPVQTESAPVNTQAPAGAVEVPQ
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHCCH
NLIPNANPLQFPTKPEEVTLKENQPITLTQALELARRSNRDLQVSLLELQRTQALLKEAQ
HHCCCCCCCCCCCCCCCEEECCCCCEEHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH
AALLPNLSVSSDVTRSQSASGQLQDELISKQGGVGNNDEPGTAFNSQAQLSYDLYTSGRR
HHHCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCH
KAAIQEAEEQVRFNELDVERQSEEIRLSVTRAYYDLQQADEQVRIARSAVENAQASLRDA
HHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EALERAGVGTRFDVLRSQVNLANNTQQLTNNLSRQQTTRRQLATLLSVPQAVNISAADPV
HHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
QLAGLWNQSLEQSIILAYQNRPELHQQLAQRNISEQQRRQALATLGPQVSFVANYNLLDQ
HHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCHHHH
FDDGVGLTDGYSVGVRATLNLYDGGAARARASQARANIAIAETRFASQRDQVRFQVEQAF
CCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCEEEEHHHHHCCHHHHHHHHHHHH
TNQRSNLENVQTANVALEQAREALRLARLRFQAGVGTQTDVINSENDLTQAEGNRITAIL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHCCCCEEEEEE
DYNRALAELQRAVTSRALISSQ
ECHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA