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The map label for this gene is cbiD [H]

Identifier: 17230339

GI number: 17230339

Start: 3468944

End: 3470056

Strand: Reverse

Name: cbiD [H]

Synonym: all2847

Alternate gene names: 17230339

Gene position: 3470056-3468944 (Counterclockwise)

Preceding gene: 17230340

Following gene: 17230338

Centisome position: 54.1

GC content: 43.85

Gene sequence:

>1113_bases
ATGCGTAGCGGATATACTTTACCTGTTTTTGCTTGTGCTGGTGCGATCGCAGCTTTACACTGGTTACGTCAGCGTCAGTC
TATACAAGTTGCATTGGTAGATTTAATTGAGCCTGCACAAATCGCCGAAGTACCTATTGAGCAGGTAGCTGGACTATCAG
CAAATATGGCTTTGGCAATTACCCGCAGTGATCCGGGTGATAATCTTGACTTGACTAAAAATACCCCGATTTGGGCTGTG
GTGGAATGGGGGAAAACTGGGGGTGAACAGGTAACTATCAAGGGTGGGGAAGGGATTGGTAAGCAAGTTAACGCTGATAA
CCAAGCAGCTATTTATAGTTATGCTCAAAGATTGTTGCAAGCCAACTTAACTCGATTATTAGCCCCAGAGGAAAGCATTA
TTGTCACTATCATCTTACCGGAGGGGCGATCGCTCGCTGTGCGGACTTCTAATTCCGCCTTTGGGGTTGTCGAGGGATTA
TCCCTACTAGGAACCACGGGTATTTCTCAACCTTTGAGTTCACCAGATCAATTAGATGCGTTTCGCAGTGAGTTACAACA
CAAAGCTAGTTTGTATGAGAGTCTGGTATTTTGCATTGGCGAGAATGGTTTAGATTTAGCGCGAAAAATCGGTATTAATG
CTGAGAAATTAGTAAAAACTGCTAATTGGTTAGGGCCGATGTTGGTAGAAGCTGATGCCTTGGGTGTTAAGGAAATCTTA
TTGTTTGGCTATCACGGTAAGTTAATGAAACTAGCCGGGGGCATTTTTCACACCCACCATCACTTGGCTGATGGACGACG
AGAAGTTTTGGCAACACACTGTGCTTTGGCGGGTTTAAGTAAACAAGATATAGAAATAGTGTTTCACTCTCCTACGGCTG
AAGCTGCACTCAAGCACTTAAAAGCGTTAGATATTTCCACAGGTAATGATTGGGTAAATCAAGTTTATAGTGCGATCGCC
GAAACCATCGATTCTCGTTGCCAAGAATATATGCAAAGCCATAGCAGCAGAGGCACAGCAGCCACAATCTGCGGCTCAAT
TCTCTTTGACCGCGATCGCAAAATTATCGTGAAGAGCAAAACTGCTTGTAACTTAATGGGAAATTTATGTTAA

Upstream 100 bases:

>100_bases
TTATATCCAACGTGATATCTCCTGGGAAGCGATGGAAAATGTTCTCACGGAAGTGGGTGTTTAGGAGGCTGGGGAAAGAA
CTAGTGACAACTGACAACTA

Downstream 100 bases:

>100_bases
TTTATTATGAATAATCATAAATAATCCCCATAAATATCTTTTTCAGTAGTGGTCTTAGTGTAATTTATACAGTTTAATAA
AATCCCTTAGTGGCAAAACA

Product: cobalt-precorrin-6A synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MRSGYTLPVFACAGAIAALHWLRQRQSIQVALVDLIEPAQIAEVPIEQVAGLSANMALAITRSDPGDNLDLTKNTPIWAV
VEWGKTGGEQVTIKGGEGIGKQVNADNQAAIYSYAQRLLQANLTRLLAPEESIIVTIILPEGRSLAVRTSNSAFGVVEGL
SLLGTTGISQPLSSPDQLDAFRSELQHKASLYESLVFCIGENGLDLARKIGINAEKLVKTANWLGPMLVEADALGVKEIL
LFGYHGKLMKLAGGIFHTHHHLADGRREVLATHCALAGLSKQDIEIVFHSPTAEAALKHLKALDISTGNDWVNQVYSAIA
ETIDSRCQEYMQSHSSRGTAATICGSILFDRDRKIIVKSKTACNLMGNLC

Sequences:

>Translated_370_residues
MRSGYTLPVFACAGAIAALHWLRQRQSIQVALVDLIEPAQIAEVPIEQVAGLSANMALAITRSDPGDNLDLTKNTPIWAV
VEWGKTGGEQVTIKGGEGIGKQVNADNQAAIYSYAQRLLQANLTRLLAPEESIIVTIILPEGRSLAVRTSNSAFGVVEGL
SLLGTTGISQPLSSPDQLDAFRSELQHKASLYESLVFCIGENGLDLARKIGINAEKLVKTANWLGPMLVEADALGVKEIL
LFGYHGKLMKLAGGIFHTHHHLADGRREVLATHCALAGLSKQDIEIVFHSPTAEAALKHLKALDISTGNDWVNQVYSAIA
ETIDSRCQEYMQSHSSRGTAATICGSILFDRDRKIIVKSKTACNLMGNLC
>Mature_370_residues
MRSGYTLPVFACAGAIAALHWLRQRQSIQVALVDLIEPAQIAEVPIEQVAGLSANMALAITRSDPGDNLDLTKNTPIWAV
VEWGKTGGEQVTIKGGEGIGKQVNADNQAAIYSYAQRLLQANLTRLLAPEESIIVTIILPEGRSLAVRTSNSAFGVVEGL
SLLGTTGISQPLSSPDQLDAFRSELQHKASLYESLVFCIGENGLDLARKIGINAEKLVKTANWLGPMLVEADALGVKEIL
LFGYHGKLMKLAGGIFHTHHHLADGRREVLATHCALAGLSKQDIEIVFHSPTAEAALKHLKALDISTGNDWVNQVYSAIA
ETIDSRCQEYMQSHSSRGTAATICGSILFDRDRKIIVKSKTACNLMGNLC

Specific function: May catalyze the methylation of C-1 in cobalt-precorrin- 5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A [H]

COG id: COG1903

COG function: function code H; Cobalamin biosynthesis protein CbiD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002748 [H]

Pfam domain/function: PF01888 CbiD [H]

EC number: NA

Molecular weight: Translated: 39843; Mature: 39843

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSGYTLPVFACAGAIAALHWLRQRQSIQVALVDLIEPAQIAEVPIEQVAGLSANMALAI
CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHCCHHHHCCCCCCEEEEE
TRSDPGDNLDLTKNTPIWAVVEWGKTGGEQVTIKGGEGIGKQVNADNQAAIYSYAQRLLQ
EECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
ANLTRLLAPEESIIVTIILPEGRSLAVRTSNSAFGVVEGLSLLGTTGISQPLSSPDQLDA
HHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHH
FRSELQHKASLYESLVFCIGENGLDLARKIGINAEKLVKTANWLGPMLVEADALGVKEIL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCHHHEEHHHCCHHHHH
LFGYHGKLMKLAGGIFHTHHHLADGRREVLATHCALAGLSKQDIEIVFHSPTAEAALKHL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHH
KALDISTGNDWVNQVYSAIAETIDSRCQEYMQSHSSRGTAATICGSILFDRDRKIIVKSK
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECC
TACNLMGNLC
HHHHHHCCCC
>Mature Secondary Structure
MRSGYTLPVFACAGAIAALHWLRQRQSIQVALVDLIEPAQIAEVPIEQVAGLSANMALAI
CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHCCHHHHCCCCCCEEEEE
TRSDPGDNLDLTKNTPIWAVVEWGKTGGEQVTIKGGEGIGKQVNADNQAAIYSYAQRLLQ
EECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
ANLTRLLAPEESIIVTIILPEGRSLAVRTSNSAFGVVEGLSLLGTTGISQPLSSPDQLDA
HHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHH
FRSELQHKASLYESLVFCIGENGLDLARKIGINAEKLVKTANWLGPMLVEADALGVKEIL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCHHHEEHHHCCHHHHH
LFGYHGKLMKLAGGIFHTHHHLADGRREVLATHCALAGLSKQDIEIVFHSPTAEAALKHL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHH
KALDISTGNDWVNQVYSAIAETIDSRCQEYMQSHSSRGTAATICGSILFDRDRKIIVKSK
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECC
TACNLMGNLC
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA