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The map label for this gene is 17230305

Identifier: 17230305

GI number: 17230305

Start: 3422818

End: 3423525

Strand: Reverse

Name: 17230305

Synonym: all2813

Alternate gene names: NA

Gene position: 3423525-3422818 (Counterclockwise)

Preceding gene: 17230313

Following gene: 17230302

Centisome position: 53.38

GC content: 41.95

Gene sequence:

>708_bases
ATGTTTAAAATATACGAACAATGTTCATGTTTTGTCAAGAGCGAAATTAGATTGATGACAGCGAATAATTCTCCCAGTAA
TTCCAAGATGCGCCGCCAACCCCAGCAGGCGAGGAGTCAGGAGCGAGTTAATTACATTCTGAGTGCAGCCGAGGAATTAT
TTATTGAGATGGGATATGAGCAGACAACAACAAGAGCGATCGCATCTCGTGCTAAAGTTCCTGTTGGTTCCTTGTATCAG
TTCTTCCCGGATAAAGAATCCATTCTCAAAGCCTTAGCTGTGCGATATTTTCAACAGGAATATCAGTTGTTTGCCCAACT
GCACACCAAAGAAGCAGAGACATTACCTGTTGCAGTGTATGTTGATCGGGTAATCGATGCGTTCGATCACTTTATGAACA
GCCATCCGGGGTATCGTGCTGTGTATGAGCAATTACTGAACTTGATGACATATTCAGCAATTGAAGCAATGGATAACTAT
GAGTATCGAATTGTGGATGAACTGGCTGCTTTCTTTGCTAAACTCAACCCCAAACTAGAAGCAGAAAAATGCCAAGCGAT
CGCCTTAGTAGTAGTGAAGGTAGTAAGTGATCTTCTATGGCTGGCTACCAGTCAGACTCCAGCAAAGCGGCAATTGCTGT
TAGCAGAAACGAAAATATTGATGTTGGGTTATCTCAATAATTATTTAGGTAATCAGATAAGGGACTAG

Upstream 100 bases:

>100_bases
CACTTCCGAGTCAAGTTTTAACGGCTGAACTGGGTGAGTATTTATCGTTTGCATGGCAAGAGCTACTAGTAATAAAATCA
ATTAAACATGAACATTATTC

Downstream 100 bases:

>100_bases
GGACTGGGGATTGGGGATTGGGGACTGGGGATTGGGGATTGGGGATTGGGGACTTCTCCCCCTGCCTCCCCTGCCTCCCC
TGCTCCCTGCCCCTCTGCCT

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; TetR Family Transcriptional Regulatory Protein; AcrR Family Transcriptional Regulator; HTH-Type Transcriptional Regulator BetI; Transcriptional Regulatory Protein; Transcription Regulator Protein; Regulatory Protein TetR

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MFKIYEQCSCFVKSEIRLMTANNSPSNSKMRRQPQQARSQERVNYILSAAEELFIEMGYEQTTTRAIASRAKVPVGSLYQ
FFPDKESILKALAVRYFQQEYQLFAQLHTKEAETLPVAVYVDRVIDAFDHFMNSHPGYRAVYEQLLNLMTYSAIEAMDNY
EYRIVDELAAFFAKLNPKLEAEKCQAIALVVVKVVSDLLWLATSQTPAKRQLLLAETKILMLGYLNNYLGNQIRD

Sequences:

>Translated_235_residues
MFKIYEQCSCFVKSEIRLMTANNSPSNSKMRRQPQQARSQERVNYILSAAEELFIEMGYEQTTTRAIASRAKVPVGSLYQ
FFPDKESILKALAVRYFQQEYQLFAQLHTKEAETLPVAVYVDRVIDAFDHFMNSHPGYRAVYEQLLNLMTYSAIEAMDNY
EYRIVDELAAFFAKLNPKLEAEKCQAIALVVVKVVSDLLWLATSQTPAKRQLLLAETKILMLGYLNNYLGNQIRD
>Mature_235_residues
MFKIYEQCSCFVKSEIRLMTANNSPSNSKMRRQPQQARSQERVNYILSAAEELFIEMGYEQTTTRAIASRAKVPVGSLYQ
FFPDKESILKALAVRYFQQEYQLFAQLHTKEAETLPVAVYVDRVIDAFDHFMNSHPGYRAVYEQLLNLMTYSAIEAMDNY
EYRIVDELAAFFAKLNPKLEAEKCQAIALVVVKVVSDLLWLATSQTPAKRQLLLAETKILMLGYLNNYLGNQIRD

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27081; Mature: 27081

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKIYEQCSCFVKSEIRLMTANNSPSNSKMRRQPQQARSQERVNYILSAAEELFIEMGYE
CCCHHHHHHHHHHHCEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCH
QTTTRAIASRAKVPVGSLYQFFPDKESILKALAVRYFQQEYQLFAQLHTKEAETLPVAVY
HHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
VDRVIDAFDHFMNSHPGYRAVYEQLLNLMTYSAIEAMDNYEYRIVDELAAFFAKLNPKLE
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
AEKCQAIALVVVKVVSDLLWLATSQTPAKRQLLLAETKILMLGYLNNYLGNQIRD
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFKIYEQCSCFVKSEIRLMTANNSPSNSKMRRQPQQARSQERVNYILSAAEELFIEMGYE
CCCHHHHHHHHHHHCEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCH
QTTTRAIASRAKVPVGSLYQFFPDKESILKALAVRYFQQEYQLFAQLHTKEAETLPVAVY
HHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
VDRVIDAFDHFMNSHPGYRAVYEQLLNLMTYSAIEAMDNYEYRIVDELAAFFAKLNPKLE
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
AEKCQAIALVVVKVVSDLLWLATSQTPAKRQLLLAETKILMLGYLNNYLGNQIRD
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA