| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is yugF [H]
Identifier: 17230253
GI number: 17230253
Start: 3357867
End: 3358784
Strand: Reverse
Name: yugF [H]
Synonym: all2761
Alternate gene names: 17230253
Gene position: 3358784-3357867 (Counterclockwise)
Preceding gene: 17230259
Following gene: 17230252
Centisome position: 52.37
GC content: 45.75
Gene sequence:
>918_bases ATGACTTTAAAGGCTCAACCGCCAGCAGCGATAGACTACGCCACACAGGTGATCGCTAATTTTGATAAACTAGTGTGGAC TTGGCGCAATCACAAAATTCAGTACACAGTCATGGGTACTGGACAGCCATTAGTACTAGTTCACGGCTTTGGTGCTTCCA TCGGACATTGGCGCAAGAACATTCCAGTTTTGGCAAATGCTGGCTACCAAATCTTTGCTATTGATTTGTTGGGTTTTGGT GGTTCTGAGAAAGCAGCAATTGACTACAGTGTAGATGTTTGGGTAGAACTGCTCAAAGACTTTTGGACAGCCCATATTCA ACAACCAGCCGTATTTGTCGGTAACTCCATTGGTGCGCTTTTAAGCCTGATAATATTGGCAAAACATCCAGAGATTACAT CTGGTGGTGTTTTAATCAACTCAGCAGGTGGTTTGAGCCATCGTCCCCATGAACTGAACCCACCACTACGGATTGTGATG GCAACATTTAATAGAGTAGTGCGATCGCCCATTACAGGTAAATTTGTCTTTAACCGTATCCGCCAAAAATCTCAAATTCG CCGCACTCTCTACCAAGTTTACCGCGATCGTACAGCCGTCACTGATGAATTAGTTGATTTACTTTATACCCCATCCTGTG ATCCTGGAGCGCAGCAAGTTTTCGCCTCCATCCTCACAGCACCTCCTGGCCCCACACCAGAGGAACTATTACCCCAAGTA GAGCGTCCTTTACTAGTAATTTGGGGTGCTGATGACCCCTGGACACCAATTACAGGGGCGAAGATTTACGAACAAGCCCA GGAGAATGGCAAAGACATAACAATTATTCCCATTCCTGGTGCTGGTCATTGTCCCCACGATGAAGTTCCAAATGTCGTCA ACGCCCAGATTATTGATTGGCTTGCACGGAGAAAATAA
Upstream 100 bases:
>100_bases GTAATGAGTGGATTATCTTTTCCTTTGGGGGGGTTTTCTCCTCTGCTCCCTGCTCCCCTGCTTTAATATATAAAGCAATA GTTTAGAAATCTTAATAATA
Downstream 100 bases:
>100_bases AGACTGAGATTGGCAAAAGTTAGGAATTGGGGCAAGGAGTAAAGGAAGGAGGGAAAATCTGGGCATCAGTTCTGCTCCCG GCTGCTTCTACTCCCTATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MTLKAQPPAAIDYATQVIANFDKLVWTWRNHKIQYTVMGTGQPLVLVHGFGASIGHWRKNIPVLANAGYQIFAIDLLGFG GSEKAAIDYSVDVWVELLKDFWTAHIQQPAVFVGNSIGALLSLIILAKHPEITSGGVLINSAGGLSHRPHELNPPLRIVM ATFNRVVRSPITGKFVFNRIRQKSQIRRTLYQVYRDRTAVTDELVDLLYTPSCDPGAQQVFASILTAPPGPTPEELLPQV ERPLLVIWGADDPWTPITGAKIYEQAQENGKDITIIPIPGAGHCPHDEVPNVVNAQIIDWLARRK
Sequences:
>Translated_305_residues MTLKAQPPAAIDYATQVIANFDKLVWTWRNHKIQYTVMGTGQPLVLVHGFGASIGHWRKNIPVLANAGYQIFAIDLLGFG GSEKAAIDYSVDVWVELLKDFWTAHIQQPAVFVGNSIGALLSLIILAKHPEITSGGVLINSAGGLSHRPHELNPPLRIVM ATFNRVVRSPITGKFVFNRIRQKSQIRRTLYQVYRDRTAVTDELVDLLYTPSCDPGAQQVFASILTAPPGPTPEELLPQV ERPLLVIWGADDPWTPITGAKIYEQAQENGKDITIIPIPGAGHCPHDEVPNVVNAQIIDWLARRK >Mature_304_residues TLKAQPPAAIDYATQVIANFDKLVWTWRNHKIQYTVMGTGQPLVLVHGFGASIGHWRKNIPVLANAGYQIFAIDLLGFGG SEKAAIDYSVDVWVELLKDFWTAHIQQPAVFVGNSIGALLSLIILAKHPEITSGGVLINSAGGLSHRPHELNPPLRIVMA TFNRVVRSPITGKFVFNRIRQKSQIRRTLYQVYRDRTAVTDELVDLLYTPSCDPGAQQVFASILTAPPGPTPEELLPQVE RPLLVIWGADDPWTPITGAKIYEQAQENGKDITIIPIPGAGHCPHDEVPNVVNAQIIDWLARRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dmpD/todF/xylF esterase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 33695; Mature: 33564
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKAQPPAAIDYATQVIANFDKLVWTWRNHKIQYTVMGTGQPLVLVHGFGASIGHWRKN CCCCCCCCHHHHHHHHHHHHHHHHEEEEECCEEEEEEEECCCCEEEEEECCCCHHHHHCC IPVLANAGYQIFAIDLLGFGGSEKAAIDYSVDVWVELLKDFWTAHIQQPAVFVGNSIGAL CCEEECCCCEEEEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHCCCEEEECCHHHHH LSLIILAKHPEITSGGVLINSAGGLSHRPHELNPPLRIVMATFNRVVRSPITGKFVFNRI HHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH RQKSQIRRTLYQVYRDRTAVTDELVDLLYTPSCDPGAQQVFASILTAPPGPTPEELLPQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH ERPLLVIWGADDPWTPITGAKIYEQAQENGKDITIIPIPGAGHCPHDEVPNVVNAQIIDW CCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHH LARRK HHHCC >Mature Secondary Structure TLKAQPPAAIDYATQVIANFDKLVWTWRNHKIQYTVMGTGQPLVLVHGFGASIGHWRKN CCCCCCCHHHHHHHHHHHHHHHHEEEEECCEEEEEEEECCCCEEEEEECCCCHHHHHCC IPVLANAGYQIFAIDLLGFGGSEKAAIDYSVDVWVELLKDFWTAHIQQPAVFVGNSIGAL CCEEECCCCEEEEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHCCCEEEECCHHHHH LSLIILAKHPEITSGGVLINSAGGLSHRPHELNPPLRIVMATFNRVVRSPITGKFVFNRI HHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH RQKSQIRRTLYQVYRDRTAVTDELVDLLYTPSCDPGAQQVFASILTAPPGPTPEELLPQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH ERPLLVIWGADDPWTPITGAKIYEQAQENGKDITIIPIPGAGHCPHDEVPNVVNAQIIDW CCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHH LARRK HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]