| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is fct [H]
Identifier: 17230166
GI number: 17230166
Start: 3240067
End: 3242670
Strand: Reverse
Name: fct [H]
Synonym: all2674
Alternate gene names: 17230166
Gene position: 3242670-3240067 (Counterclockwise)
Preceding gene: 17230167
Following gene: 17230165
Centisome position: 50.56
GC content: 42.82
Gene sequence:
>2604_bases ATGACATGGAATTATTGGCAACCCGCCATTGGTGTTGCTAGTGTAATCACTGTTCTCGTCTCCCAACCAGTTTGGGCTGC TCCTGTTCCGGTAACGGCAGTAGAACTCTATGATACAGATCAAGGTTTAGAGGTCGTTTTAAAAACTTCGCCAGGAGTAA CCCTAACTACTCAAACTAGCACCGAAGACAAAACCCTAATTATCACCGTCAATAATGCTCAACTGCAATTGGTAGAAGGA AAACCCCCCATCACTACCAATAATCCCATCCCTGGTATTGCTGAGATTTTTGTGGGACAGTCTGACCCTAACACTATTGA AATTGAAATCACCGGTGTTAATGCAGTCCCGCAATTTAATCTACGTCAGGACGGACAAGAATTTATTGTTAGTCTTCCTT TTGTTACTACCAGTCAAACTCCACCAACTACACAAACCCCAACCCCAGAAACACCTACCGCAGAAACCCCAACCCCAGAA ACACCCACAACTCCAGAAACACCCACAGCCGAAACCCCACCCCCAGAAGAACCAGACGAACCCATCGAACTAACAGTTGT CGGGGATCAATTCCGTCCAACGTATCAAGTTCCTAATTCTTCTGTGGGAACGCGCACAGATACTCCCCTAATTGACGTAC CCCAAGCTATTCAAGTCATACCCCAAGAAGTTATTAAAGACCAAGGAACTCGCAGCCTTGGCGAAGTCTTAAAAAATACT AGTAGTGCTAGTAGCGGTCGGACATCTTCCCAAGCACCAGCACTAACTCCAGTAATTCGGGGCTTTGAATCTCGTAACTT ATTACGCAACGGTTTAAGGGATGATAGCTTACGGTTTCAAAGTGAAATTGCTAACGTTGAACGCGTAGAAGTCCTCAAAG GCCCAGCTTCCGTCCTCTTTGGACAAGGTGATTTAGGTGGGGTCGTCAACCTAGTTACTAAACAACCTCTAAATACACCT TACTACTCTATTGGCTATCAAGTAGGACAATTTGGTTTACATCGTCCCACCATCGACTTTTCTGGCCCCTTAGATAAAGA TGGTGTTGCTTATCGTTTGAATGCGGCTTATCAAACTGCTGAAAGCTTTAAAGATTTCGAGAATAGTGAATCCTTTTTTA TTGCGCCTGTTGTTAGATTAATAGGTAACGAAAATACAAATTTAACAGCAAGCATAGAATATCTGAAATACCGCAGTTTT GAGACAGCACCAGACTTACCAGCGTCAGGAACAGTTATTTCCAACCCTAATGGTAGAGTTTCACGAGAGACTAACTTAGG TGAACCATCATTATCTGAAAGTGAGTCTTTAGTTACCCGTTTAGGCTATCAGTTAGACCATCGCCTCAATGATAACTGGA CAATCAAAAGTGAATTTTCTACAGCCTTTTTAGATGTTCCAGAAAGTACCGTAGTGCTTCCTATCGCTAACTCTAGTACA TCAAATGGACTAAATAGAGATGGTCGTACACTCCGACGCTTTTTAGTAGAAAACCCATCTAGTACGACCAGTTTGACGTT TAATAATAGCCTCTTAGGTAAGTTCAAAACAGGCAGTATTGAACACAGTTTACTGTTTGGTGTGGAAGTTACTAGAGAGG AAACAGAAGATAGACTAGATTTTAGACAACTCAGAGACATTGATATTTTCAATCCCGTCTATCGTCCTGAGAGTGTGTCA TCATTTGCCATTCCTTTTGGTAATACTAATACCGAGAAAAATTCTTTGGGGATTTATGCTCAAGACCAAATTTCCCTATC CAAAAATATTATTTTAGTTTTGGGTGGACGTTTGGATTTTGTTAACCAAGACTATGAAGACTTACTCTCAGAAGAAGAAA GCTTTGAACGTAACGACACAGTTTTTAGTCCCCGTGTCGGTATTGTTTACAAACCTAGTGAAAACCTTTCTTTGTATGCC AGCTACAGTAGATCCTTTACACCCGTTGTTGGTAGAACCAGGGTTTTAGACACAAACACAGGAATAACAACAGTTGGCGA ACCCTTTGAACCAGAAAGAGGAACTCAGTATGAAGTGGGTTTAAAAGCAAATTTATTAGGCGATCGCCTCTCCACCACTC TCGCATTTTATAATCTAGAACGTACCAACGTTGCAGCCCAAGGACTCAGCGAACCCCTCTCCCAAATCCAAATCGGCAAG CAACGCAGCCAAGGTATAGAATTAGACGTAGCCGGGGAAATTCTCCCTGGTTGGAACTTAACAGCCAGTTACGCCTATAC AGATAGCAAAATCACCGAAGATAGTCGCCCCGAATTTCAAGATAGACAATTACAAAACGTTCCCAGAAACTCCTTTGGTT TGTGGAGTACCTACGAACTGCAAGCCGGAAGCCTCAAAGGGTTAGGATTTGGATTAGGTGTTTTCACGCAAGGAGAACGC CAAGGAGACCTACGCAACACCTTCACATTACCTAGCTACTTGCGTACAGATGCTTCCATCTTTTACCGCCGTGACAAATT CCGCGCCGCCATTAATATTCAAAACCTATTCGATGAAAATTACTACGAAGGTGCGCGGGACATTGTGCGTGTAATTCCAG GTGCGCCCTTTACTTTGACAGGTAGTGTCTCCTTTGAATTTTAA
Upstream 100 bases:
>100_bases GTTAAATAACTGAGCATAAAAATTTCCCTTTCCACACATTACGACATTCTTCGCTTGATCTGTAAGCGTCTACATCAGTA AATTAGGACAATCGGTATTT
Downstream 100 bases:
>100_bases TTCATGGCGGCAGGGGGCAGGGAGCAGGGGGAGAAAATTCCATACCCAATACCCAGTCCCCAATTTTGAATTTTGAATTG ATTTGTCCCCAGAAACTATG
Product: ferrichrome-iron receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 867; Mature: 866
Protein sequence:
>867_residues MTWNYWQPAIGVASVITVLVSQPVWAAPVPVTAVELYDTDQGLEVVLKTSPGVTLTTQTSTEDKTLIITVNNAQLQLVEG KPPITTNNPIPGIAEIFVGQSDPNTIEIEITGVNAVPQFNLRQDGQEFIVSLPFVTTSQTPPTTQTPTPETPTAETPTPE TPTTPETPTAETPPPEEPDEPIELTVVGDQFRPTYQVPNSSVGTRTDTPLIDVPQAIQVIPQEVIKDQGTRSLGEVLKNT SSASSGRTSSQAPALTPVIRGFESRNLLRNGLRDDSLRFQSEIANVERVEVLKGPASVLFGQGDLGGVVNLVTKQPLNTP YYSIGYQVGQFGLHRPTIDFSGPLDKDGVAYRLNAAYQTAESFKDFENSESFFIAPVVRLIGNENTNLTASIEYLKYRSF ETAPDLPASGTVISNPNGRVSRETNLGEPSLSESESLVTRLGYQLDHRLNDNWTIKSEFSTAFLDVPESTVVLPIANSST SNGLNRDGRTLRRFLVENPSSTTSLTFNNSLLGKFKTGSIEHSLLFGVEVTREETEDRLDFRQLRDIDIFNPVYRPESVS SFAIPFGNTNTEKNSLGIYAQDQISLSKNIILVLGGRLDFVNQDYEDLLSEEESFERNDTVFSPRVGIVYKPSENLSLYA SYSRSFTPVVGRTRVLDTNTGITTVGEPFEPERGTQYEVGLKANLLGDRLSTTLAFYNLERTNVAAQGLSEPLSQIQIGK QRSQGIELDVAGEILPGWNLTASYAYTDSKITEDSRPEFQDRQLQNVPRNSFGLWSTYELQAGSLKGLGFGLGVFTQGER QGDLRNTFTLPSYLRTDASIFYRRDKFRAAINIQNLFDENYYEGARDIVRVIPGAPFTLTGSVSFEF
Sequences:
>Translated_867_residues MTWNYWQPAIGVASVITVLVSQPVWAAPVPVTAVELYDTDQGLEVVLKTSPGVTLTTQTSTEDKTLIITVNNAQLQLVEG KPPITTNNPIPGIAEIFVGQSDPNTIEIEITGVNAVPQFNLRQDGQEFIVSLPFVTTSQTPPTTQTPTPETPTAETPTPE TPTTPETPTAETPPPEEPDEPIELTVVGDQFRPTYQVPNSSVGTRTDTPLIDVPQAIQVIPQEVIKDQGTRSLGEVLKNT SSASSGRTSSQAPALTPVIRGFESRNLLRNGLRDDSLRFQSEIANVERVEVLKGPASVLFGQGDLGGVVNLVTKQPLNTP YYSIGYQVGQFGLHRPTIDFSGPLDKDGVAYRLNAAYQTAESFKDFENSESFFIAPVVRLIGNENTNLTASIEYLKYRSF ETAPDLPASGTVISNPNGRVSRETNLGEPSLSESESLVTRLGYQLDHRLNDNWTIKSEFSTAFLDVPESTVVLPIANSST SNGLNRDGRTLRRFLVENPSSTTSLTFNNSLLGKFKTGSIEHSLLFGVEVTREETEDRLDFRQLRDIDIFNPVYRPESVS SFAIPFGNTNTEKNSLGIYAQDQISLSKNIILVLGGRLDFVNQDYEDLLSEEESFERNDTVFSPRVGIVYKPSENLSLYA SYSRSFTPVVGRTRVLDTNTGITTVGEPFEPERGTQYEVGLKANLLGDRLSTTLAFYNLERTNVAAQGLSEPLSQIQIGK QRSQGIELDVAGEILPGWNLTASYAYTDSKITEDSRPEFQDRQLQNVPRNSFGLWSTYELQAGSLKGLGFGLGVFTQGER QGDLRNTFTLPSYLRTDASIFYRRDKFRAAINIQNLFDENYYEGARDIVRVIPGAPFTLTGSVSFEF >Mature_866_residues TWNYWQPAIGVASVITVLVSQPVWAAPVPVTAVELYDTDQGLEVVLKTSPGVTLTTQTSTEDKTLIITVNNAQLQLVEGK PPITTNNPIPGIAEIFVGQSDPNTIEIEITGVNAVPQFNLRQDGQEFIVSLPFVTTSQTPPTTQTPTPETPTAETPTPET PTTPETPTAETPPPEEPDEPIELTVVGDQFRPTYQVPNSSVGTRTDTPLIDVPQAIQVIPQEVIKDQGTRSLGEVLKNTS SASSGRTSSQAPALTPVIRGFESRNLLRNGLRDDSLRFQSEIANVERVEVLKGPASVLFGQGDLGGVVNLVTKQPLNTPY YSIGYQVGQFGLHRPTIDFSGPLDKDGVAYRLNAAYQTAESFKDFENSESFFIAPVVRLIGNENTNLTASIEYLKYRSFE TAPDLPASGTVISNPNGRVSRETNLGEPSLSESESLVTRLGYQLDHRLNDNWTIKSEFSTAFLDVPESTVVLPIANSSTS NGLNRDGRTLRRFLVENPSSTTSLTFNNSLLGKFKTGSIEHSLLFGVEVTREETEDRLDFRQLRDIDIFNPVYRPESVSS FAIPFGNTNTEKNSLGIYAQDQISLSKNIILVLGGRLDFVNQDYEDLLSEEESFERNDTVFSPRVGIVYKPSENLSLYAS YSRSFTPVVGRTRVLDTNTGITTVGEPFEPERGTQYEVGLKANLLGDRLSTTLAFYNLERTNVAAQGLSEPLSQIQIGKQ RSQGIELDVAGEILPGWNLTASYAYTDSKITEDSRPEFQDRQLQNVPRNSFGLWSTYELQAGSLKGLGFGLGVFTQGERQ GDLRNTFTLPSYLRTDASIFYRRDKFRAAINIQNLFDENYYEGARDIVRVIPGAPFTLTGSVSFEF
Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=707, Percent_Identity=28.4299858557284, Blast_Score=233, Evalue=4e-62, Organism=Escherichia coli, GI1787024, Length=756, Percent_Identity=26.1904761904762, Blast_Score=171, Evalue=2e-43, Organism=Escherichia coli, GI1787344, Length=736, Percent_Identity=25.4076086956522, Blast_Score=154, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 95469; Mature: 95338
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.1 %Met (Translated Protein) 0.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWNYWQPAIGVASVITVLVSQPVWAAPVPVTAVELYDTDQGLEVVLKTSPGVTLTTQTS CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCEEEEEECC TEDKTLIITVNNAQLQLVEGKPPITTNNPIPGIAEIFVGQSDPNTIEIEITGVNAVPQFN CCCCEEEEEECCCEEEEECCCCCCCCCCCCCCHHHEEECCCCCCEEEEEEEECCCCCCCC LRQDGQEFIVSLPFVTTSQTPPTTQTPTPETPTAETPTPETPTTPETPTAETPPPEEPDE CCCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PIELTVVGDQFRPTYQVPNSSVGTRTDTPLIDVPQAIQVIPQEVIKDQGTRSLGEVLKNT CEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCC SSASSGRTSSQAPALTPVIRGFESRNLLRNGLRDDSLRFQSEIANVERVEVLKGPASVLF CCCCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCCHHHHHHHHCCCCEEHEECCCHHEEE GQGDLGGVVNLVTKQPLNTPYYSIGYQVGQFGLHRPTIDFSGPLDKDGVAYRLNAAYQTA CCCCCCCHHHHHCCCCCCCCCEEECCCHHCCCCCCCCCCCCCCCCCCCEEEEECHHHHHH ESFKDFENSESFFIAPVVRLIGNENTNLTASIEYLKYRSFETAPDLPASGTVISNPNGRV HHHHHHCCCCCEEHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEECCCCCE SRETNLGEPSLSESESLVTRLGYQLDHRLNDNWTIKSEFSTAFLDVPESTVVLPIANSST EECCCCCCCCCCHHHHHHHHHCHHHHCCCCCCEEEEECCCEEEEECCCCEEEEEECCCCC SNGLNRDGRTLRRFLVENPSSTTSLTFNNSLLGKFKTGSIEHSLLFGVEVTREETEDRLD CCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCCEEEEEEEEECHHHHHHHHH FRQLRDIDIFNPVYRPESVSSFAIPFGNTNTEKNSLGIYAQDQISLSKNIILVLGGRLDF HHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEECCEECC VNQDYEDLLSEEESFERNDTVFSPRVGIVYKPSENLSLYASYSRSFTPVVGRTRVLDTNT CCCCHHHHHHHHHHCCCCCCEECCCCCEEECCCCCCEEEEECCCCCCCCCCCEEEEECCC GITTVGEPFEPERGTQYEVGLKANLLGDRLSTTLAFYNLERTNVAAQGLSEPLSQIQIGK CCEECCCCCCCCCCCEEEECEEEEHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHCH QRSQGIELDVAGEILPGWNLTASYAYTDSKITEDSRPEFQDRQLQNVPRNSFGLWSTYEL HHCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEE QAGSLKGLGFGLGVFTQGERQGDLRNTFTLPSYLRTDASIFYRRDKFRAAINIQNLFDEN CCCCCCCCEEEECEEECCCCCCCCCCEECCHHHHHCCCCEEEECCHHEEEEEHHHHHCCH YYEGARDIVRVIPGAPFTLTGSVSFEF HHHHHHHHHHHCCCCCEEEEEEEEECC >Mature Secondary Structure TWNYWQPAIGVASVITVLVSQPVWAAPVPVTAVELYDTDQGLEVVLKTSPGVTLTTQTS CCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCEEEEEECC TEDKTLIITVNNAQLQLVEGKPPITTNNPIPGIAEIFVGQSDPNTIEIEITGVNAVPQFN CCCCEEEEEECCCEEEEECCCCCCCCCCCCCCHHHEEECCCCCCEEEEEEEECCCCCCCC LRQDGQEFIVSLPFVTTSQTPPTTQTPTPETPTAETPTPETPTTPETPTAETPPPEEPDE CCCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PIELTVVGDQFRPTYQVPNSSVGTRTDTPLIDVPQAIQVIPQEVIKDQGTRSLGEVLKNT CEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCC SSASSGRTSSQAPALTPVIRGFESRNLLRNGLRDDSLRFQSEIANVERVEVLKGPASVLF CCCCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCCHHHHHHHHCCCCEEHEECCCHHEEE GQGDLGGVVNLVTKQPLNTPYYSIGYQVGQFGLHRPTIDFSGPLDKDGVAYRLNAAYQTA CCCCCCCHHHHHCCCCCCCCCEEECCCHHCCCCCCCCCCCCCCCCCCCEEEEECHHHHHH ESFKDFENSESFFIAPVVRLIGNENTNLTASIEYLKYRSFETAPDLPASGTVISNPNGRV HHHHHHCCCCCEEHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEECCCCCE SRETNLGEPSLSESESLVTRLGYQLDHRLNDNWTIKSEFSTAFLDVPESTVVLPIANSST EECCCCCCCCCCHHHHHHHHHCHHHHCCCCCCEEEEECCCEEEEECCCCEEEEEECCCCC SNGLNRDGRTLRRFLVENPSSTTSLTFNNSLLGKFKTGSIEHSLLFGVEVTREETEDRLD CCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCCEEEEEEEEECHHHHHHHHH FRQLRDIDIFNPVYRPESVSSFAIPFGNTNTEKNSLGIYAQDQISLSKNIILVLGGRLDF HHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEECCEECC VNQDYEDLLSEEESFERNDTVFSPRVGIVYKPSENLSLYASYSRSFTPVVGRTRVLDTNT CCCCHHHHHHHHHHCCCCCCEECCCCCEEECCCCCCEEEEECCCCCCCCCCCEEEEECCC GITTVGEPFEPERGTQYEVGLKANLLGDRLSTTLAFYNLERTNVAAQGLSEPLSQIQIGK CCEECCCCCCCCCCCEEEECEEEEHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHCH QRSQGIELDVAGEILPGWNLTASYAYTDSKITEDSRPEFQDRQLQNVPRNSFGLWSTYEL HHCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEE QAGSLKGLGFGLGVFTQGERQGDLRNTFTLPSYLRTDASIFYRRDKFRAAINIQNLFDEN CCCCCCCCEEEECEEECCCCCCCCCCEECCHHHHHCCCCEEEECCHHEEEEEHHHHHCCH YYEGARDIVRVIPGAPFTLTGSVSFEF HHHHHHHHHHHCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8576065 [H]