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The map label for this gene is yfiY [H]

Identifier: 17230101

GI number: 17230101

Start: 3115421

End: 3116380

Strand: Reverse

Name: yfiY [H]

Synonym: all2609

Alternate gene names: 17230101

Gene position: 3116380-3115421 (Counterclockwise)

Preceding gene: 17230102

Following gene: 17230100

Centisome position: 48.59

GC content: 41.46

Gene sequence:

>960_bases
ATGTATAAAATTCGTCGTGGGCTGGGGTTCTTTGGGTTAACACTTATGGCAGTTGTGCTGTTTTCTGCTTGTACTAATAA
TGTCTCACAAAAGTTAACTAACTCTGCTGAGTTATTGCCTTCACAGTGCAGAATAGTCAAACATCTTACGGGTGAAACCT
GTGTTCCTAATATCCCACAGCGAATTATTGCTGCAAGTGAACCAGCTTTGGAGGCTGCTTTAATACTAGACTTCAAGCCC
ATAGGTACAACTAATTACGCACAACAGGCTGATTACTTGAGAGAACGGTTTGAAAGTTCTGACAGTGTTGGTTTAGATTC
ACGACAACTAAGTTTAGAGAAAATTCTCACTATCAAACCAGATTTAATTTTAGCTACAGATGATTATGGAGAACAGCAGG
AATTGTATGACCGGCTCTCACAAATGGCTCCTACTGTGATTGCAAAGTGGTGGGATGGTCAGAGTATTCGCTGGAAAGAA
TGCTTTCAACTATTTGCTCAAGCCTTTGGGAAAACATCTGAAGCTGAAGAAACCGTCAATGCTTACAATCAAAGGATTGC
AGAATTACAGCAGCAAATGGGCGATCGCCTCCCAAATACTGTCATCTCAATTATCGAAATTTATCCCGATAGAATCCGCC
TATATGGGAAAACCAAGACTGTTAGCCTGAGTAGCACCATTATCGAAGATATCGGCTTACCTCGCCCACCTTCCCAGGAA
GAGGGAATGGATATCTCCCTTGAAAGTATTGGGGATGCTGATGGCGACATCATTTTTTTAACGGCACGAGATCCCGAAGC
ACAACTTTATCAGCAAGTTCTTAATCATCCTCTATGGAAACAACTGAAGGCTGTACAGGCTGGAAAAGTGTATAAAGTTG
AAAATAGTTACTGGGGTGGAAGCGGCTACATTGCTGCCAATCTCGTTTTGGATGACTTGTTTAAATATTTAGTGAAGTAA

Upstream 100 bases:

>100_bases
ATCGCATTAACCCTGGTGAGCCGTTCACGGTAAGAGGAACGGTGTCCGTTGAGTTTTAGATTGTCCTGCACTTCGAGTAG
AACTAAATCAACTTTTTAAA

Downstream 100 bases:

>100_bases
TCATGAATATTTCAACCAACAAAACTCAAAATAATTGCCGTTTTTGTTCCGAGATTTCCCAAGCTAACGGTGAAGACCCC
ATTGGTTCAGCGAACAATGC

Product: iron(III) dicitrate-binding periplasmic protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MYKIRRGLGFFGLTLMAVVLFSACTNNVSQKLTNSAELLPSQCRIVKHLTGETCVPNIPQRIIAASEPALEAALILDFKP
IGTTNYAQQADYLRERFESSDSVGLDSRQLSLEKILTIKPDLILATDDYGEQQELYDRLSQMAPTVIAKWWDGQSIRWKE
CFQLFAQAFGKTSEAEETVNAYNQRIAELQQQMGDRLPNTVISIIEIYPDRIRLYGKTKTVSLSSTIIEDIGLPRPPSQE
EGMDISLESIGDADGDIIFLTARDPEAQLYQQVLNHPLWKQLKAVQAGKVYKVENSYWGGSGYIAANLVLDDLFKYLVK

Sequences:

>Translated_319_residues
MYKIRRGLGFFGLTLMAVVLFSACTNNVSQKLTNSAELLPSQCRIVKHLTGETCVPNIPQRIIAASEPALEAALILDFKP
IGTTNYAQQADYLRERFESSDSVGLDSRQLSLEKILTIKPDLILATDDYGEQQELYDRLSQMAPTVIAKWWDGQSIRWKE
CFQLFAQAFGKTSEAEETVNAYNQRIAELQQQMGDRLPNTVISIIEIYPDRIRLYGKTKTVSLSSTIIEDIGLPRPPSQE
EGMDISLESIGDADGDIIFLTARDPEAQLYQQVLNHPLWKQLKAVQAGKVYKVENSYWGGSGYIAANLVLDDLFKYLVK
>Mature_319_residues
MYKIRRGLGFFGLTLMAVVLFSACTNNVSQKLTNSAELLPSQCRIVKHLTGETCVPNIPQRIIAASEPALEAALILDFKP
IGTTNYAQQADYLRERFESSDSVGLDSRQLSLEKILTIKPDLILATDDYGEQQELYDRLSQMAPTVIAKWWDGQSIRWKE
CFQLFAQAFGKTSEAEETVNAYNQRIAELQQQMGDRLPNTVISIIEIYPDRIRLYGKTKTVSLSSTIIEDIGLPRPPSQE
EGMDISLESIGDADGDIIFLTARDPEAQLYQQVLNHPLWKQLKAVQAGKVYKVENSYWGGSGYIAANLVLDDLFKYLVK

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 35836; Mature: 35836

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKIRRGLGFFGLTLMAVVLFSACTNNVSQKLTNSAELLPSQCRIVKHLTGETCVPNIPQ
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
RIIAASEPALEAALILDFKPIGTTNYAQQADYLRERFESSDSVGLDSRQLSLEKILTIKP
HHHHCCCCHHHEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEECC
DLILATDDYGEQQELYDRLSQMAPTVIAKWWDGQSIRWKECFQLFAQAFGKTSEAEETVN
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
AYNQRIAELQQQMGDRLPNTVISIIEIYPDRIRLYGKTKTVSLSSTIIEDIGLPRPPSQE
HHHHHHHHHHHHHHHHCHHHHHHHHHHCHHHHEEEECCEEEEHHHHHHHHCCCCCCCCCC
EGMDISLESIGDADGDIIFLTARDPEAQLYQQVLNHPLWKQLKAVQAGKVYKVENSYWGG
CCCEEEHHHCCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCCCCC
SGYIAANLVLDDLFKYLVK
CCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYKIRRGLGFFGLTLMAVVLFSACTNNVSQKLTNSAELLPSQCRIVKHLTGETCVPNIPQ
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
RIIAASEPALEAALILDFKPIGTTNYAQQADYLRERFESSDSVGLDSRQLSLEKILTIKP
HHHHCCCCHHHEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEECC
DLILATDDYGEQQELYDRLSQMAPTVIAKWWDGQSIRWKECFQLFAQAFGKTSEAEETVN
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
AYNQRIAELQQQMGDRLPNTVISIIEIYPDRIRLYGKTKTVSLSSTIIEDIGLPRPPSQE
HHHHHHHHHHHHHHHHCHHHHHHHHHHCHHHHEEEECCEEEEHHHHHHHHCCCCCCCCCC
EGMDISLESIGDADGDIIFLTARDPEAQLYQQVLNHPLWKQLKAVQAGKVYKVENSYWGG
CCCEEEHHHCCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCCCCC
SGYIAANLVLDDLFKYLVK
CCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]