| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230100
Identifier: 17230100
GI number: 17230100
Start: 3114417
End: 3115418
Strand: Reverse
Name: 17230100
Synonym: all2608
Alternate gene names: NA
Gene position: 3115418-3114417 (Counterclockwise)
Preceding gene: 17230101
Following gene: 17230096
Centisome position: 48.57
GC content: 40.22
Gene sequence:
>1002_bases ATGAATATTTCAACCAACAAAACTCAAAATAATTGCCGTTTTTGTTCCGAGATTTCCCAAGCTAACGGTGAAGACCCCAT TGGTTCAGCGAACAATGCTGAACAATACTTCATTATTGAAGCTGCACAACCTTGGCCAGATAACATTTGGATAAACCCTA ACTCCATACCACAGGATGTATTAGACCCGTTACAATGTATTTGGGGAAATGGTGGGTCAATTCGACCACTAGCGATCGCA CCAGACCGAGAGTATTCCCATCCAAGTTATACTCGTGTATTCTACTATCGCCGACCCGCCAAATTTTTTGCTCAATTTGA GAAACATGAATTTATCGTACCTGATGCTTTACTTGGTTCTTTGGCATTAGCTTTACTCAAAAATCCAGAAGAATTACCAA ACCTTAACCAATATCGCCAACCAACAAACCACATTCGAGAAATACTCGTTTGCAACCACGGCAATGTTGATGCAGCTTGT AGCAGATTTGGTTATCCGCTTTATCAAAAATTGCGTTCTGAATACGCGAGTGCAAATAATAATAACTTACGTTTTTGGCG ATGTAGTCATTTTGGTGGACACGAATTTGCACCTACCTTAGTTGACTTACCCCAAGGACAATATTGGGGTCATTTAAAAC CAGAAATTTTAGATTTATTAGTCCGACGTAATGGTTCAGTTAAAGAACTATATCCCTACTATCGAGGCTGGGGTGGTTTA TCCTTCTTTGAACAAATTGCCGAACGAGAAATTTGGATGCTTGAAGGTTGGAAATGGCTGGAATATCATAAAGCCGGTCA AGTTTTAGCCAGTGATGAAATTAACCAAGAATGGGCTGATATTCGCATTGATTACACCACAGTTGATGGCAATATTAGCG GTGCATATCAAGCCAGGGTCGAAGTAAAAGGTTCAGTTATGACAGCCTGGAAATCAGGAGCAAACCCAACTTTAGAGGAA GTCAAGCAGTATCAAGTTAGTAGTCTAGTGAAATTGGCATGA
Upstream 100 bases:
>100_bases GAAAAGTGTATAAAGTTGAAAATAGTTACTGGGGTGGAAGCGGCTACATTGCTGCCAATCTCGTTTTGGATGACTTGTTT AAATATTTAGTGAAGTAATC
Downstream 100 bases:
>100_bases TCAAAATTGGACACGCGCAGCTTTTCTAACTTCTGTAATGTCTAATTCTAGTGCTTCTGCTACCTGTTCCAAAGTTAACC CCAATTTCAATAATCGAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Sucraseferredoxin-Like; Sucrase/Ferredoxin-Like Protein; Sucrase/Ferredoxin-Like Family
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MNISTNKTQNNCRFCSEISQANGEDPIGSANNAEQYFIIEAAQPWPDNIWINPNSIPQDVLDPLQCIWGNGGSIRPLAIA PDREYSHPSYTRVFYYRRPAKFFAQFEKHEFIVPDALLGSLALALLKNPEELPNLNQYRQPTNHIREILVCNHGNVDAAC SRFGYPLYQKLRSEYASANNNNLRFWRCSHFGGHEFAPTLVDLPQGQYWGHLKPEILDLLVRRNGSVKELYPYYRGWGGL SFFEQIAEREIWMLEGWKWLEYHKAGQVLASDEINQEWADIRIDYTTVDGNISGAYQARVEVKGSVMTAWKSGANPTLEE VKQYQVSSLVKLA
Sequences:
>Translated_333_residues MNISTNKTQNNCRFCSEISQANGEDPIGSANNAEQYFIIEAAQPWPDNIWINPNSIPQDVLDPLQCIWGNGGSIRPLAIA PDREYSHPSYTRVFYYRRPAKFFAQFEKHEFIVPDALLGSLALALLKNPEELPNLNQYRQPTNHIREILVCNHGNVDAAC SRFGYPLYQKLRSEYASANNNNLRFWRCSHFGGHEFAPTLVDLPQGQYWGHLKPEILDLLVRRNGSVKELYPYYRGWGGL SFFEQIAEREIWMLEGWKWLEYHKAGQVLASDEINQEWADIRIDYTTVDGNISGAYQARVEVKGSVMTAWKSGANPTLEE VKQYQVSSLVKLA >Mature_333_residues MNISTNKTQNNCRFCSEISQANGEDPIGSANNAEQYFIIEAAQPWPDNIWINPNSIPQDVLDPLQCIWGNGGSIRPLAIA PDREYSHPSYTRVFYYRRPAKFFAQFEKHEFIVPDALLGSLALALLKNPEELPNLNQYRQPTNHIREILVCNHGNVDAAC SRFGYPLYQKLRSEYASANNNNLRFWRCSHFGGHEFAPTLVDLPQGQYWGHLKPEILDLLVRRNGSVKELYPYYRGWGGL SFFEQIAEREIWMLEGWKWLEYHKAGQVLASDEINQEWADIRIDYTTVDGNISGAYQARVEVKGSVMTAWKSGANPTLEE VKQYQVSSLVKLA
Specific function: Unknown
COG id: COG4759
COG function: function code O; Uncharacterized protein conserved in bacteria containing thioredoxin-like domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38123; Mature: 38123
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNISTNKTQNNCRFCSEISQANGEDPIGSANNAEQYFIIEAAQPWPDNIWINPNSIPQDV CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCHHH LDPLQCIWGNGGSIRPLAIAPDREYSHPSYTRVFYYRRPAKFFAQFEKHEFIVPDALLGS HHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEEECHHHHHHHHHCCCEECCHHHHHH LALALLKNPEELPNLNQYRQPTNHIREILVCNHGNVDAACSRFGYPLYQKLRSEYASANN HHHHHHCCHHHCCCCHHHCCHHHHHHEEEEECCCCHHHHHHHCCCHHHHHHHHHHHCCCC NNLRFWRCSHFGGHEFAPTLVDLPQGQYWGHLKPEILDLLVRRNGSVKELYPYYRGWGGL CCEEEEEECCCCCCCCCCHHEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCH SFFEQIAEREIWMLEGWKWLEYHKAGQVLASDEINQEWADIRIDYTTVDGNISGAYQARV HHHHHHHHCCEEEECCCCHHHHHHCCCEEECCCCCCCEEEEEEEEEEECCCCCCEEEEEE EVKGSVMTAWKSGANPTLEEVKQYQVSSLVKLA EECCEEEEEECCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MNISTNKTQNNCRFCSEISQANGEDPIGSANNAEQYFIIEAAQPWPDNIWINPNSIPQDV CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCHHH LDPLQCIWGNGGSIRPLAIAPDREYSHPSYTRVFYYRRPAKFFAQFEKHEFIVPDALLGS HHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEEECHHHHHHHHHCCCEECCHHHHHH LALALLKNPEELPNLNQYRQPTNHIREILVCNHGNVDAACSRFGYPLYQKLRSEYASANN HHHHHHCCHHHCCCCHHHCCHHHHHHEEEEECCCCHHHHHHHCCCHHHHHHHHHHHCCCC NNLRFWRCSHFGGHEFAPTLVDLPQGQYWGHLKPEILDLLVRRNGSVKELYPYYRGWGGL CCEEEEEECCCCCCCCCCHHEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCH SFFEQIAEREIWMLEGWKWLEYHKAGQVLASDEINQEWADIRIDYTTVDGNISGAYQARV HHHHHHHHCCEEEECCCCHHHHHHCCCEEECCCCCCCEEEEEEEEEEECCCCCCEEEEEE EVKGSVMTAWKSGANPTLEEVKQYQVSSLVKLA EECCEEEEEECCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA