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The map label for this gene is nifX [H]

Identifier: 17230023

GI number: 17230023

Start: 3035897

End: 3036403

Strand: Reverse

Name: nifX [H]

Synonym: all2531

Alternate gene names: 17230023

Gene position: 3036403-3035897 (Counterclockwise)

Preceding gene: 17230025

Following gene: 17230022

Centisome position: 47.34

GC content: 37.87

Gene sequence:

>507_bases
ATGAAGATAGCATTTGCTACAAGTGATAGGATTAATGTTGACGCTCACTTTGGCTGGGCGCAGGAAATTGATGTTTATGA
AATTTCAGACGGGGGTTATGAATTTATCGAAACTCTCTCCTTTAATAAGGAAACTCCTAAACCTAGTGAAGATACAACCG
AAAAAAGCGAAGGTGATTGCAAACACGGTAAAAGCGATTGCAAAAAAGCTAAAAAAGAAGAGGAGCAAAAACCTAAGGTT
CAAAATGGTGAAAGTGATGATAAAGTAGCTCAAAAAATCGCAGCTTTATCTGATTGCAAAATTGTATATGTGGCATCCAT
TGGCGGTACTGCTGCTGCCAAGTTAATCAAAAAAGGCGTAATGCCAGTTAAACCACGTTCAAAGAAGGAAGATATTATCT
ACCTTTTGAATAGATTAGTGCAAACTCTTAAAGGTAATCCTCCGCCTTGGTTGCGTAAAGCTCTACGTCAAAATCAAGAA
AGTATCGGTGAACTAGAATCTGTGTAA

Upstream 100 bases:

>100_bases
AAGGTGCAGGGCATTGCCTATTCAATAATAGGTAATAATTTAACCTCAATTCAGCAATTATTAGCAGTTAGTCATAACTG
ATGAAAAAAGGAACACAAAA

Downstream 100 bases:

>100_bases
TAAATCCTCTCTAAGCTGATGCTAATTAGGCATTAATCTATAGATGGAAATTTTCGCTTCACATTCCATCTAAATCTCCC
TATTTATGAATTAAGCAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MKIAFATSDRINVDAHFGWAQEIDVYEISDGGYEFIETLSFNKETPKPSEDTTEKSEGDCKHGKSDCKKAKKEEEQKPKV
QNGESDDKVAQKIAALSDCKIVYVASIGGTAAAKLIKKGVMPVKPRSKKEDIIYLLNRLVQTLKGNPPPWLRKALRQNQE
SIGELESV

Sequences:

>Translated_168_residues
MKIAFATSDRINVDAHFGWAQEIDVYEISDGGYEFIETLSFNKETPKPSEDTTEKSEGDCKHGKSDCKKAKKEEEQKPKV
QNGESDDKVAQKIAALSDCKIVYVASIGGTAAAKLIKKGVMPVKPRSKKEDIIYLLNRLVQTLKGNPPPWLRKALRQNQE
SIGELESV
>Mature_168_residues
MKIAFATSDRINVDAHFGWAQEIDVYEISDGGYEFIETLSFNKETPKPSEDTTEKSEGDCKHGKSDCKKAKKEEEQKPKV
QNGESDDKVAQKIAALSDCKIVYVASIGGTAAAKLIKKGVMPVKPRSKKEDIIYLLNRLVQTLKGNPPPWLRKALRQNQE
SIGELESV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifX/nifY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003731
- InterPro:   IPR013480 [H]

Pfam domain/function: PF02579 Nitro_FeMo-Co [H]

EC number: NA

Molecular weight: Translated: 18682; Mature: 18682

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAFATSDRINVDAHFGWAQEIDVYEISDGGYEFIETLSFNKETPKPSEDTTEKSEGDC
CEEEEECCCCEEEEECCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
KHGKSDCKKAKKEEEQKPKVQNGESDDKVAQKIAALSDCKIVYVASIGGTAAAKLIKKGV
CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCC
MPVKPRSKKEDIIYLLNRLVQTLKGNPPPWLRKALRQNQESIGELESV
CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIAFATSDRINVDAHFGWAQEIDVYEISDGGYEFIETLSFNKETPKPSEDTTEKSEGDC
CEEEEECCCCEEEEECCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
KHGKSDCKKAKKEEEQKPKVQNGESDDKVAQKIAALSDCKIVYVASIGGTAAAKLIKKGV
CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCC
MPVKPRSKKEDIIYLLNRLVQTLKGNPPPWLRKALRQNQESIGELESV
CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10564803 [H]