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The map label for this gene is 17229942

Identifier: 17229942

GI number: 17229942

Start: 2946055

End: 2947644

Strand: Direct

Name: 17229942

Synonym: alr2450

Alternate gene names: NA

Gene position: 2946055-2947644 (Clockwise)

Preceding gene: 17229941

Following gene: 17229946

Centisome position: 45.93

GC content: 45.35

Gene sequence:

>1590_bases
ATGGCTATCGGCTACGTCGCGCTCGTACTTCACGCACATCTACCCTTCGTTCGTCACCCAGAAAGTGACTACGTGCTAGA
GGAAGAATGGCTCTATGAAGCCATCACCGAAACATACATTCCCTTGTTGAAAGTATTTGATGGTTTAAAGCGAGACGGTA
TCGACTTTAAAATTACTATGAGTATGACACCGCCTCTTGTGTCGATGCTCCGCGATCCTCTATTGCAAGAACGCTATGAC
GCACATTTAGCCCAACTCGAAGAACTGATAGAACTGGAAGGCGAACGTAATGCCCAAAATGGACACCTGCGTTACTTAGC
TGAACACTACGCCACTGAGTTTAACGAAGCGCGTCAGATGTGGGAGCGCTACAACGGTGATTTGGTAACAGCTTTTAAAC
AGTTCCAAGATTCTAACAACCTAGAAATTATCACTTGTGGTGCTACCCACGGCTATTTGCCACTGATGAAAATGTATCCC
CAAGCAGTGTGGGCGCAGATTCAGGTGGCTTGTGAACACTACGAGGAAACTTTTGGTCGTCCACCCAAAGGAATATGGTT
GCCGGAATGTGCCTATTATGAAGGGTTGGAACGAATGCTGGCGGATGCCGGTTTACGTTACTTCCTCACTGATGGACATG
GTATTTTGTATGCTCGTCCTCGTCCTCGGTTCGGCACTTATGCGCCAATTTTCACGGAAACTGGTGTTGCAGCCTTCGGT
CGAGATCATGAGTCTTCTCAGCAGGTGTGGTCTTCTGAGGTTGGTTATCCAGGTGCAGCAGAATATCGAGAATTTTATAA
AGATTTGGGTTGGGAAGCTGAGTATGAATACATCAAGCCCTACATCATGCCCAACGGTCAACGTAAAAATACAGGTATTA
AGTATCACAAAATTACTGGACGTGGTTTAGGTTTATCAGATAAAGCACTATACGATCCTTATTGGGCAAAGGAAAAGGCA
GCAGAACACGCAGCCAATTTTATGTATAACCGCGAACGCCAAGCAGAGCATCTGTATGGAATTATGCAGCGTCCGCCGAT
TATCGTTTCGCCCTACGATGCTGAATTGTTTGGCCATTGGTGGTATGAAGGGCCTTGGTTTATTGATTACCTGTTTCGCA
AGTCATGGTATGACCAAGGAACTTATGCGATGACTCATTTGGCAGACTATTTACGGAATGAGCCTACACAACAAGTCTGT
CGTCCTTCCCAATCAAGCTGGGGTTATAAGGGTTTCCATGAATATTGGTTAAATGAAACAAATGCTTGGATTTATCCACA
TTTGCACAAAGCGGCTGAACGCATGATCGAAATATCTACCCTAGAACCAGAAGATGAGTTGGGATGGAGGGCGCTTAACC
AAGCAGCAAGAGAACTGCTGTTGGCACAATCTTCTGACTGGGCATTTATTATGCGGACGGGAACAATGGTTCCTTATGCT
GTGAGACGGACGAGATCGCACCTCATGCGTTTTAATAAGCTATACGAAGACGCCAAAGTCGGCAAGTTTGACAGTGGTTG
GTTAGAAAAAGTCGAGGTAATGGATAACATTTTCCCCAATATTAATTATCGGGTTTACCGTCCTTTGTAA

Upstream 100 bases:

>100_bases
TATCAAGTCAATCGGATACGATCCCCAGAAGGTCTTAAAATATTGTTAATTTCCCCCTTATCCCTCGACCTTCACTTTAC
AAGTATCACCCCAGAACACT

Downstream 100 bases:

>100_bases
GGAGTGCTGAGTTGTGAGTGAATCAATTTCATCTCTTGGTTAGCCTCGGACTTCCTTTTTTGTCATGAAAAGCAAAACCC
CCAATATCAACGATTGGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family Protein; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Alpha-Amylase; (1-_4)-Alpha-D-Glucan Branching; Family; Glycogen Branching; Glycosyl Transferase/Glycoside Hydrolase-Like Protein; Glycosyl Hydrolase Family Protein

Number of amino acids: Translated: 529; Mature: 528

Protein sequence:

>529_residues
MAIGYVALVLHAHLPFVRHPESDYVLEEEWLYEAITETYIPLLKVFDGLKRDGIDFKITMSMTPPLVSMLRDPLLQERYD
AHLAQLEELIELEGERNAQNGHLRYLAEHYATEFNEARQMWERYNGDLVTAFKQFQDSNNLEIITCGATHGYLPLMKMYP
QAVWAQIQVACEHYEETFGRPPKGIWLPECAYYEGLERMLADAGLRYFLTDGHGILYARPRPRFGTYAPIFTETGVAAFG
RDHESSQQVWSSEVGYPGAAEYREFYKDLGWEAEYEYIKPYIMPNGQRKNTGIKYHKITGRGLGLSDKALYDPYWAKEKA
AEHAANFMYNRERQAEHLYGIMQRPPIIVSPYDAELFGHWWYEGPWFIDYLFRKSWYDQGTYAMTHLADYLRNEPTQQVC
RPSQSSWGYKGFHEYWLNETNAWIYPHLHKAAERMIEISTLEPEDELGWRALNQAARELLLAQSSDWAFIMRTGTMVPYA
VRRTRSHLMRFNKLYEDAKVGKFDSGWLEKVEVMDNIFPNINYRVYRPL

Sequences:

>Translated_529_residues
MAIGYVALVLHAHLPFVRHPESDYVLEEEWLYEAITETYIPLLKVFDGLKRDGIDFKITMSMTPPLVSMLRDPLLQERYD
AHLAQLEELIELEGERNAQNGHLRYLAEHYATEFNEARQMWERYNGDLVTAFKQFQDSNNLEIITCGATHGYLPLMKMYP
QAVWAQIQVACEHYEETFGRPPKGIWLPECAYYEGLERMLADAGLRYFLTDGHGILYARPRPRFGTYAPIFTETGVAAFG
RDHESSQQVWSSEVGYPGAAEYREFYKDLGWEAEYEYIKPYIMPNGQRKNTGIKYHKITGRGLGLSDKALYDPYWAKEKA
AEHAANFMYNRERQAEHLYGIMQRPPIIVSPYDAELFGHWWYEGPWFIDYLFRKSWYDQGTYAMTHLADYLRNEPTQQVC
RPSQSSWGYKGFHEYWLNETNAWIYPHLHKAAERMIEISTLEPEDELGWRALNQAARELLLAQSSDWAFIMRTGTMVPYA
VRRTRSHLMRFNKLYEDAKVGKFDSGWLEKVEVMDNIFPNINYRVYRPL
>Mature_528_residues
AIGYVALVLHAHLPFVRHPESDYVLEEEWLYEAITETYIPLLKVFDGLKRDGIDFKITMSMTPPLVSMLRDPLLQERYDA
HLAQLEELIELEGERNAQNGHLRYLAEHYATEFNEARQMWERYNGDLVTAFKQFQDSNNLEIITCGATHGYLPLMKMYPQ
AVWAQIQVACEHYEETFGRPPKGIWLPECAYYEGLERMLADAGLRYFLTDGHGILYARPRPRFGTYAPIFTETGVAAFGR
DHESSQQVWSSEVGYPGAAEYREFYKDLGWEAEYEYIKPYIMPNGQRKNTGIKYHKITGRGLGLSDKALYDPYWAKEKAA
EHAANFMYNRERQAEHLYGIMQRPPIIVSPYDAELFGHWWYEGPWFIDYLFRKSWYDQGTYAMTHLADYLRNEPTQQVCR
PSQSSWGYKGFHEYWLNETNAWIYPHLHKAAERMIEISTLEPEDELGWRALNQAARELLLAQSSDWAFIMRTGTMVPYAV
RRTRSHLMRFNKLYEDAKVGKFDSGWLEKVEVMDNIFPNINYRVYRPL

Specific function: Unknown

COG id: COG1543

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62104; Mature: 61973

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIGYVALVLHAHLPFVRHPESDYVLEEEWLYEAITETYIPLLKVFDGLKRDGIDFKITM
CCHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
SMTPPLVSMLRDPLLQERYDAHLAQLEELIELEGERNAQNGHLRYLAEHYATEFNEARQM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
WERYNGDLVTAFKQFQDSNNLEIITCGATHGYLPLMKMYPQAVWAQIQVACEHYEETFGR
HHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PPKGIWLPECAYYEGLERMLADAGLRYFLTDGHGILYARPRPRFGTYAPIFTETGVAAFG
CCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCCCCHHHCCCHHHHC
RDHESSQQVWSSEVGYPGAAEYREFYKDLGWEAEYEYIKPYIMPNGQRKNTGIKYHKITG
CCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHCCCEECCCCCCCCCCEEEEEECC
RGLGLSDKALYDPYWAKEKAAEHAANFMYNRERQAEHLYGIMQRPPIIVSPYDAELFGHW
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHCCC
WYEGPWFIDYLFRKSWYDQGTYAMTHLADYLRNEPTQQVCRPSQSSWGYKGFHEYWLNET
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHCCCC
NAWIYPHLHKAAERMIEISTLEPEDELGWRALNQAARELLLAQSSDWAFIMRTGTMVPYA
CCEECHHHHHHHHHHEEHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHH
VRRTRSHLMRFNKLYEDAKVGKFDSGWLEKVEVMDNIFPNINYRVYRPL
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEECCC
>Mature Secondary Structure 
AIGYVALVLHAHLPFVRHPESDYVLEEEWLYEAITETYIPLLKVFDGLKRDGIDFKITM
CHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
SMTPPLVSMLRDPLLQERYDAHLAQLEELIELEGERNAQNGHLRYLAEHYATEFNEARQM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
WERYNGDLVTAFKQFQDSNNLEIITCGATHGYLPLMKMYPQAVWAQIQVACEHYEETFGR
HHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PPKGIWLPECAYYEGLERMLADAGLRYFLTDGHGILYARPRPRFGTYAPIFTETGVAAFG
CCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCCCCHHHCCCHHHHC
RDHESSQQVWSSEVGYPGAAEYREFYKDLGWEAEYEYIKPYIMPNGQRKNTGIKYHKITG
CCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHCCCEECCCCCCCCCCEEEEEECC
RGLGLSDKALYDPYWAKEKAAEHAANFMYNRERQAEHLYGIMQRPPIIVSPYDAELFGHW
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHCCC
WYEGPWFIDYLFRKSWYDQGTYAMTHLADYLRNEPTQQVCRPSQSSWGYKGFHEYWLNET
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHCCCC
NAWIYPHLHKAAERMIEISTLEPEDELGWRALNQAARELLLAQSSDWAFIMRTGTMVPYA
CCEECHHHHHHHHHHEEHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHH
VRRTRSHLMRFNKLYEDAKVGKFDSGWLEKVEVMDNIFPNINYRVYRPL
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA