| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229929
Identifier: 17229929
GI number: 17229929
Start: 2931105
End: 2931299
Strand: Reverse
Name: 17229929
Synonym: asl2437
Alternate gene names: NA
Gene position: 2931299-2931105 (Counterclockwise)
Preceding gene: 17229930
Following gene: 17229928
Centisome position: 45.7
GC content: 40.51
Gene sequence:
>195_bases ATGACAAGAGAATTTAACGTGGTTATGGAACGGGACTCTGATGGCTATTTTGTCGCGTCTGTATCTAGTTTGGCGGGATG TCACACCCAAGCTAAATCTTTAGACGAACTAATGGAGCGTATGAAAGAAACTATCGAACTTTGCGTAAAAGTTGAACAAG AACAAGCTGAAGTATTAGAGTTTGTGGGTATGTAG
Upstream 100 bases:
>100_bases CAAGTTGAGTTTGCCGCAGAAGCAACGGAAAATGAACAGGCGATGGCATAGCGAAAAAGTATCGCCATCGCTCATCATTT AATTAAACAATAATTTCCCG
Downstream 100 bases:
>100_bases AGGGTTTCTGGTAAAAATATACTAAGGGTGTACTGAGGTTCTAGAATGTCGCGCAATGAGATTATGCCAACTGTTCTTCA ATTAGATACGATTGATGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MTREFNVVMERDSDGYFVASVSSLAGCHTQAKSLDELMERMKETIELCVKVEQEQAEVLEFVGM
Sequences:
>Translated_64_residues MTREFNVVMERDSDGYFVASVSSLAGCHTQAKSLDELMERMKETIELCVKVEQEQAEVLEFVGM >Mature_63_residues TREFNVVMERDSDGYFVASVSSLAGCHTQAKSLDELMERMKETIELCVKVEQEQAEVLEFVGM
Specific function: Unknown
COG id: COG1598
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0150 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005357 [H]
Pfam domain/function: PF03681 UPF0150 [H]
EC number: NA
Molecular weight: Translated: 7276; Mature: 7145
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 7.8 %Met (Translated Protein) 10.9 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 9.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTREFNVVMERDSDGYFVASVSSLAGCHTQAKSLDELMERMKETIELCVKVEQEQAEVLE CCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVGM HHCC >Mature Secondary Structure TREFNVVMERDSDGYFVASVSSLAGCHTQAKSLDELMERMKETIELCVKVEQEQAEVLE CCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVGM HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]