| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229907
Identifier: 17229907
GI number: 17229907
Start: 2897707
End: 2898468
Strand: Reverse
Name: 17229907
Synonym: all2415
Alternate gene names: NA
Gene position: 2898468-2897707 (Counterclockwise)
Preceding gene: 17229908
Following gene: 17229905
Centisome position: 45.19
GC content: 33.6
Gene sequence:
>762_bases ATGGCAAAACAATCGGACACGGTAAATTTAGGATTATTTAAAAATATGCGATCGCTGATAATCACAGTAGTCTTACCTGC GACTGTTTTTCTTCTCTTCATGCAGATTGTATTTAAGCTAAATGGCATTCCCTTTTATACATTGGTTGCAGATCCCAACG AAATTGGCAAGCTACCTCCCTACGCCGGCATGATTTCTATGTTAGGCATACTTTTTTGGTGTGCATCGGCAGCAATTTCT ATATTTACTGCTAGCTTTTTAAGTAAAAATAAGCTTGTGAGGTCAAAAAAATGGTCAGATTTCCTCTTATTCTCCGGATT TCTGACTTTGTTCATCCTTCTTGATGACTTATTTCAGATTCACGAATATTATTTTCATCCCTTTGTAGATTTGCAGGCTT GGGAAAATCCTAGAAGAGTTCAAAATTTCTTTGAGACAGTATTTTTTATTATTTATGCCATTTTAATGGGTATGTATTTA TACCGTTTTAAGTCTATCTTTAAAATAACTAATTACAAGATTTTACTTTTAGCTCTTTTGTTCTTTGCAATATCAACTAT CGTTGATATCGCTACACCAGAAAGTATGTTCTTACATTACACAATTGAAGAAGGCTTAAAATTCTTAGGGATTGTAACTT GGTTCAGCTATTTCATGGATTGTTGTTATCACCAGTTAAGGAGTTCAATTTGGATTGAGCATGAAAGAATGCACATAGGA GATATACAAGAAATTACTTCTTCTATAAAAGATCATGGGTAG
Upstream 100 bases:
>100_bases TGGTTTTTACATCTCACCAACCACTAACACCTGACCACTAAAACAAACTTCATCTATCTAAATTATCAAATTCGTATCTA TCAAAAGGAGTAATTTTTTG
Downstream 100 bases:
>100_bases GAGAAATTTTACTGTCGATAATTAAGTAGGTTTGATCACTCGGTTCTGTCTGCTTGTATTTGCCTTTCTTCAAGTCTCCA CTGGAGCATTAGCGATCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MAKQSDTVNLGLFKNMRSLIITVVLPATVFLLFMQIVFKLNGIPFYTLVADPNEIGKLPPYAGMISMLGILFWCASAAIS IFTASFLSKNKLVRSKKWSDFLLFSGFLTLFILLDDLFQIHEYYFHPFVDLQAWENPRRVQNFFETVFFIIYAILMGMYL YRFKSIFKITNYKILLLALLFFAISTIVDIATPESMFLHYTIEEGLKFLGIVTWFSYFMDCCYHQLRSSIWIEHERMHIG DIQEITSSIKDHG
Sequences:
>Translated_253_residues MAKQSDTVNLGLFKNMRSLIITVVLPATVFLLFMQIVFKLNGIPFYTLVADPNEIGKLPPYAGMISMLGILFWCASAAIS IFTASFLSKNKLVRSKKWSDFLLFSGFLTLFILLDDLFQIHEYYFHPFVDLQAWENPRRVQNFFETVFFIIYAILMGMYL YRFKSIFKITNYKILLLALLFFAISTIVDIATPESMFLHYTIEEGLKFLGIVTWFSYFMDCCYHQLRSSIWIEHERMHIG DIQEITSSIKDHG >Mature_252_residues AKQSDTVNLGLFKNMRSLIITVVLPATVFLLFMQIVFKLNGIPFYTLVADPNEIGKLPPYAGMISMLGILFWCASAAISI FTASFLSKNKLVRSKKWSDFLLFSGFLTLFILLDDLFQIHEYYFHPFVDLQAWENPRRVQNFFETVFFIIYAILMGMYLY RFKSIFKITNYKILLLALLFFAISTIVDIATPESMFLHYTIEEGLKFLGIVTWFSYFMDCCYHQLRSSIWIEHERMHIGD IQEITSSIKDHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29500; Mature: 29369
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKQSDTVNLGLFKNMRSLIITVVLPATVFLLFMQIVFKLNGIPFYTLVADPNEIGKLPP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCCC YAGMISMLGILFWCASAAISIFTASFLSKNKLVRSKKWSDFLLFSGFLTLFILLDDLFQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH HEYYFHPFVDLQAWENPRRVQNFFETVFFIIYAILMGMYLYRFKSIFKITNYKILLLALL HHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFAISTIVDIATPESMFLHYTIEEGLKFLGIVTWFSYFMDCCYHQLRSSIWIEHERMHIG HHHHHHHHHHCCCCHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DIQEITSSIKDHG CHHHHHHHHHCCC >Mature Secondary Structure AKQSDTVNLGLFKNMRSLIITVVLPATVFLLFMQIVFKLNGIPFYTLVADPNEIGKLPP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCCC YAGMISMLGILFWCASAAISIFTASFLSKNKLVRSKKWSDFLLFSGFLTLFILLDDLFQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH HEYYFHPFVDLQAWENPRRVQNFFETVFFIIYAILMGMYLYRFKSIFKITNYKILLLALL HHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFAISTIVDIATPESMFLHYTIEEGLKFLGIVTWFSYFMDCCYHQLRSSIWIEHERMHIG HHHHHHHHHHCCCCHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DIQEITSSIKDHG CHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA