| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229905
Identifier: 17229905
GI number: 17229905
Start: 2895591
End: 2896793
Strand: Reverse
Name: 17229905
Synonym: all2413
Alternate gene names: NA
Gene position: 2896793-2895591 (Counterclockwise)
Preceding gene: 17229907
Following gene: 17229902
Centisome position: 45.17
GC content: 44.97
Gene sequence:
>1203_bases ATGAATCCACAAGTACAGTCCCACAAAAATAATTCCCAAGATTGGTCATGGCCGTTTTGGCCTACTTTACCGCTTTATCC CTACGGTAGAAGGCGCACACTTTGCCGGGAAGTAGTTAAAGATACTATTTGGACATTTGACCAAGTTCAAGGCATTCTCT ACACCGTAGTGCCGATTAGGATGACTGTAATCAAGCTAAATGCAGGTGGTTTGCTAATTTATGCACCAGTCGCCCCAACT AAGGAATGTGTCCGACTGGTTAATGAGTTAGTTGCCCAACATGGTGAAGTTAAGTACATAATTCTACCTACCAGTTCTGG TCTAGAACATAAAATATTTGTCGGCCCCTTCGCTCGCAAGTTTCCCCAAGCACAGGTATTTGTTGCCCCCCATCAGTGGA GTTTCCCATTTAACTTACCACTGAGTTGGCTGGGATTTCCTCAAAACCGGACTCAAGTACTACCAGAAGACTCTAGTCAA ACGCCTTTTGCGGATGAGTTTGATTATGCAGTATTGGATATTAATCTGGGACGAGGTTCTTTTGTTGAGGTAGCATTTTT ACATAGGCGATCGCATACTCTACTTGTTACCGATGCGGTTCTTTCTGTGCCAGCAGAACCACCCGCCATCTTGGAATTAG AACCGTACCCCTTACTATTTCACGCCAGGGATAACGCACGACAAGTCATTGAAGATAACCCAGCTAATCGTCGTCAAGGA TGGCAGCGTATTTCCCTATTTGCTATTTACTTTCGCCCCAGCGCCCTGGGATTAACTGAATGGGGGCAGATGTGGCGCGA TGCACTCAAAGCACCCGATCATTCTGCCAAAGCATACTTTGGTTTTTTCCCCTTTCGCTGGCAAGAAAATTGGCAACAGT CCTTTGCTGCCTTATCTGCCAATGGACGGCCTTTTGTCGCCCCGATTTTACAAGTGCTGATTCTGCCCCAAGCCCCAAAA AAAGTTCTCAACTGGGCTGATACAATAGCACAGTGGAATTTTCAACAGATTATTTCCTGTCACTTTGACTCACCATTTAT CACCAGTCCTGCACAATTTCGCCAGGCTTTCACTTTCTTAGAAAAGAACTCTGTTGACAGCGACAATCAGGCTCTGTTGG TAGAAGATTTGCAATTCATCAAAGAGCTGGAAGCAAATTTATTGAAACAAGGCATTGCCACACCACCGAGAGAGAAAGTT TAA
Upstream 100 bases:
>100_bases AGAGAGACTGGAGGAATAGAAGACGCAGGGGGTGCAGGGGAAGCAGGGGAGAAGAAAACCACTGACTATTGACCACTGAC TACTGACTATTGACTAAAAG
Downstream 100 bases:
>100_bases ACCAATTCGCAATAGCCTTTGCTACGCAACGCTACCGCGAACGGCAAGGCTAACGCCAACGCAATTCGCTTTTTAGGTGT TGTAACGGTGATTTAAACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MNPQVQSHKNNSQDWSWPFWPTLPLYPYGRRRTLCREVVKDTIWTFDQVQGILYTVVPIRMTVIKLNAGGLLIYAPVAPT KECVRLVNELVAQHGEVKYIILPTSSGLEHKIFVGPFARKFPQAQVFVAPHQWSFPFNLPLSWLGFPQNRTQVLPEDSSQ TPFADEFDYAVLDINLGRGSFVEVAFLHRRSHTLLVTDAVLSVPAEPPAILELEPYPLLFHARDNARQVIEDNPANRRQG WQRISLFAIYFRPSALGLTEWGQMWRDALKAPDHSAKAYFGFFPFRWQENWQQSFAALSANGRPFVAPILQVLILPQAPK KVLNWADTIAQWNFQQIISCHFDSPFITSPAQFRQAFTFLEKNSVDSDNQALLVEDLQFIKELEANLLKQGIATPPREKV
Sequences:
>Translated_400_residues MNPQVQSHKNNSQDWSWPFWPTLPLYPYGRRRTLCREVVKDTIWTFDQVQGILYTVVPIRMTVIKLNAGGLLIYAPVAPT KECVRLVNELVAQHGEVKYIILPTSSGLEHKIFVGPFARKFPQAQVFVAPHQWSFPFNLPLSWLGFPQNRTQVLPEDSSQ TPFADEFDYAVLDINLGRGSFVEVAFLHRRSHTLLVTDAVLSVPAEPPAILELEPYPLLFHARDNARQVIEDNPANRRQG WQRISLFAIYFRPSALGLTEWGQMWRDALKAPDHSAKAYFGFFPFRWQENWQQSFAALSANGRPFVAPILQVLILPQAPK KVLNWADTIAQWNFQQIISCHFDSPFITSPAQFRQAFTFLEKNSVDSDNQALLVEDLQFIKELEANLLKQGIATPPREKV >Mature_400_residues MNPQVQSHKNNSQDWSWPFWPTLPLYPYGRRRTLCREVVKDTIWTFDQVQGILYTVVPIRMTVIKLNAGGLLIYAPVAPT KECVRLVNELVAQHGEVKYIILPTSSGLEHKIFVGPFARKFPQAQVFVAPHQWSFPFNLPLSWLGFPQNRTQVLPEDSSQ TPFADEFDYAVLDINLGRGSFVEVAFLHRRSHTLLVTDAVLSVPAEPPAILELEPYPLLFHARDNARQVIEDNPANRRQG WQRISLFAIYFRPSALGLTEWGQMWRDALKAPDHSAKAYFGFFPFRWQENWQQSFAALSANGRPFVAPILQVLILPQAPK KVLNWADTIAQWNFQQIISCHFDSPFITSPAQFRQAFTFLEKNSVDSDNQALLVEDLQFIKELEANLLKQGIATPPREKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45808; Mature: 45808
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPQVQSHKNNSQDWSWPFWPTLPLYPYGRRRTLCREVVKDTIWTFDQVQGILYTVVPIR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE MTVIKLNAGGLLIYAPVAPTKECVRLVNELVAQHGEVKYIILPTSSGLEHKIFVGPFARK EEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECHHHHH FPQAQVFVAPHQWSFPFNLPLSWLGFPQNRTQVLPEDSSQTPFADEFDYAVLDINLGRGS CCCCEEEECCCCCCCCCCCCHHEECCCCCCCEECCCCCCCCCCCCCCCEEEEEEECCCCC FVEVAFLHRRSHTLLVTDAVLSVPAEPPAILELEPYPLLFHARDNARQVIEDNPANRRQG EEEEEEEECCCCEEEEEHHHHCCCCCCCEEEEECCCEEEEECCCCHHHHHCCCCCHHHHH WQRISLFAIYFRPSALGLTEWGQMWRDALKAPDHSAKAYFGFFPFRWQENWQQSFAALSA HHEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHCC NGRPFVAPILQVLILPQAPKKVLNWADTIAQWNFQQIISCHFDSPFITSPAQFRQAFTFL CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHH EKNSVDSDNQALLVEDLQFIKELEANLLKQGIATPPREKV HHCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNPQVQSHKNNSQDWSWPFWPTLPLYPYGRRRTLCREVVKDTIWTFDQVQGILYTVVPIR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE MTVIKLNAGGLLIYAPVAPTKECVRLVNELVAQHGEVKYIILPTSSGLEHKIFVGPFARK EEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECHHHHH FPQAQVFVAPHQWSFPFNLPLSWLGFPQNRTQVLPEDSSQTPFADEFDYAVLDINLGRGS CCCCEEEECCCCCCCCCCCCHHEECCCCCCCEECCCCCCCCCCCCCCCEEEEEEECCCCC FVEVAFLHRRSHTLLVTDAVLSVPAEPPAILELEPYPLLFHARDNARQVIEDNPANRRQG EEEEEEEECCCCEEEEEHHHHCCCCCCCEEEEECCCEEEEECCCCHHHHHCCCCCHHHHH WQRISLFAIYFRPSALGLTEWGQMWRDALKAPDHSAKAYFGFFPFRWQENWQQSFAALSA HHEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHCC NGRPFVAPILQVLILPQAPKKVLNWADTIAQWNFQQIISCHFDSPFITSPAQFRQAFTFL CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHH EKNSVDSDNQALLVEDLQFIKELEANLLKQGIATPPREKV HHCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA