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The map label for this gene is yfcH [C]

Identifier: 17229882

GI number: 17229882

Start: 2873558

End: 2874478

Strand: Reverse

Name: yfcH [C]

Synonym: all2390

Alternate gene names: 17229882

Gene position: 2874478-2873558 (Counterclockwise)

Preceding gene: 17229883

Following gene: 17229876

Centisome position: 44.82

GC content: 43.65

Gene sequence:

>921_bases
ATGAAAGTAGCAATTACAGGCGCAACAGGATTTGTCGGAACTCGCTTAGTACAACGACTTCACAAAGAAGGTCATCAAAT
AATTGTCTTAACCCGTAACACTGCATCGGCTCGGAGGAATTTTTCTGCACAGACATTTGCCAATGTAGAAATTGTTGCTT
ATACACCCACTACATCCGGGGCGTGGCAAGATGTAATTGCTGGTTGTGATGGTGTAGTCAACTTGGCAGGAGAACCTATC
GCAGAGGCACGCTGGACACCAGAACACAAACGAGAGATTCTTAACAGCCGTCAACTAGGCACACAGAAAATAGTCGAAGC
CATAGCGAAAGCTAACCCCAAACCTACAGTATTAGTTAATGCTTCTGCTGTTGGTTACTACGGTACAAGTGAAACCACTG
CCTTTGATGAAAATAGCCCCTCTGGTAGGGATTTTCTCGCTCAAGTTTGTCAAGCTTGGGAAGCAGAAGCCCAAAAAGTG
AAAGAATCAGGCGTTCGCCTAGTGATATTACGTTTAGGTATTGTTCTAGGGTTGGGTGGTGCTTTAGGAAAAATGATTAC
CCCTTTTAAACTCTATGCTGGGGGGCCAATTGGTAGCGGTCGTCAATGGTTTTCTTGGATTCACATTGATGATTTGGTAA
ATCTGATTGTGCAAGCTTTAACCAACTCACAACTAGAAGGTGTATATAATGCTACGGCTCCCAATCCTATCCGCATGAAT
GACTTAAGCCAAACTATGGGACAAGTAATGAACCGTCCTTCATGGTTGCCTGTCCCAGGTTTTGCTATAGAAGCTCTTTT
GGGAGATGGGGCGATCGTTGTTCTAGAAGGTCAACAAGTACTTCCTAAACGAGCTTTAGCATCTGGCATTAAATACCAGT
ATCCCAATTTACAACCAGCTTTACAAGAAATTTTGCAGTGA

Upstream 100 bases:

>100_bases
ATTAGTTCTTCCTCCTGCTGTCTTGCCTCTCCCCAATCCCAGCAACATAAGTTGAAAATTTGATAAAAAACTTTAAAATA
AGGGTTTGGGGAGGTGCATT

Downstream 100 bases:

>100_bases
AGTTAATTGTTCACGATGCCAGTCTTTTTTTTAGCTCAGTCTCTAACTGTTCACCTGTGCTAACCACAACCCTGTTTGGT
TTAGCCCTAACAATTGAGAG

Product: cell division inhibitor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MKVAITGATGFVGTRLVQRLHKEGHQIIVLTRNTASARRNFSAQTFANVEIVAYTPTTSGAWQDVIAGCDGVVNLAGEPI
AEARWTPEHKREILNSRQLGTQKIVEAIAKANPKPTVLVNASAVGYYGTSETTAFDENSPSGRDFLAQVCQAWEAEAQKV
KESGVRLVILRLGIVLGLGGALGKMITPFKLYAGGPIGSGRQWFSWIHIDDLVNLIVQALTNSQLEGVYNATAPNPIRMN
DLSQTMGQVMNRPSWLPVPGFAIEALLGDGAIVVLEGQQVLPKRALASGIKYQYPNLQPALQEILQ

Sequences:

>Translated_306_residues
MKVAITGATGFVGTRLVQRLHKEGHQIIVLTRNTASARRNFSAQTFANVEIVAYTPTTSGAWQDVIAGCDGVVNLAGEPI
AEARWTPEHKREILNSRQLGTQKIVEAIAKANPKPTVLVNASAVGYYGTSETTAFDENSPSGRDFLAQVCQAWEAEAQKV
KESGVRLVILRLGIVLGLGGALGKMITPFKLYAGGPIGSGRQWFSWIHIDDLVNLIVQALTNSQLEGVYNATAPNPIRMN
DLSQTMGQVMNRPSWLPVPGFAIEALLGDGAIVVLEGQQVLPKRALASGIKYQYPNLQPALQEILQ
>Mature_306_residues
MKVAITGATGFVGTRLVQRLHKEGHQIIVLTRNTASARRNFSAQTFANVEIVAYTPTTSGAWQDVIAGCDGVVNLAGEPI
AEARWTPEHKREILNSRQLGTQKIVEAIAKANPKPTVLVNASAVGYYGTSETTAFDENSPSGRDFLAQVCQAWEAEAQKV
KESGVRLVILRLGIVLGLGGALGKMITPFKLYAGGPIGSGRQWFSWIHIDDLVNLIVQALTNSQLEGVYNATAPNPIRMN
DLSQTMGQVMNRPSWLPVPGFAIEALLGDGAIVVLEGQQVLPKRALASGIKYQYPNLQPALQEILQ

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=310, Percent_Identity=39.3548387096774, Blast_Score=212, Evalue=4e-55,
Organism=Escherichia coli, GI1788642, Length=307, Percent_Identity=40.3908794788274, Blast_Score=233, Evalue=1e-62,
Organism=Drosophila melanogaster, GI28573846, Length=306, Percent_Identity=33.3333333333333, Blast_Score=166, Evalue=2e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 33024; Mature: 33024

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVAITGATGFVGTRLVQRLHKEGHQIIVLTRNTASARRNFSAQTFANVEIVAYTPTTSG
CEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCEECCEEEEEECCCCCC
AWQDVIAGCDGVVNLAGEPIAEARWTPEHKREILNSRQLGTQKIVEAIAKANPKPTVLVN
HHHHHHHCCCHHHHCCCCCHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEE
ASAVGYYGTSETTAFDENSPSGRDFLAQVCQAWEAEAQKVKESGVRLVILRLGIVLGLGG
CCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCH
ALGKMITPFKLYAGGPIGSGRQWFSWIHIDDLVNLIVQALTNSQLEGVYNATAPNPIRMN
HHHHHCCCEEEEECCCCCCCHHHHEEEEHHHHHHHHHHHHHCHHHCCCCCCCCCCCEEHH
DLSQTMGQVMNRPSWLPVPGFAIEALLGDGAIVVLEGQQVLPKRALASGIKYQYPNLQPA
HHHHHHHHHHCCCCCCCCCCHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCHH
LQEILQ
HHHHHC
>Mature Secondary Structure
MKVAITGATGFVGTRLVQRLHKEGHQIIVLTRNTASARRNFSAQTFANVEIVAYTPTTSG
CEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCEECCEEEEEECCCCCC
AWQDVIAGCDGVVNLAGEPIAEARWTPEHKREILNSRQLGTQKIVEAIAKANPKPTVLVN
HHHHHHHCCCHHHHCCCCCHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEE
ASAVGYYGTSETTAFDENSPSGRDFLAQVCQAWEAEAQKVKESGVRLVILRLGIVLGLGG
CCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCH
ALGKMITPFKLYAGGPIGSGRQWFSWIHIDDLVNLIVQALTNSQLEGVYNATAPNPIRMN
HHHHHCCCEEEEECCCCCCCHHHHEEEEHHHHHHHHHHHHHCHHHCCCCCCCCCCCEEHH
DLSQTMGQVMNRPSWLPVPGFAIEALLGDGAIVVLEGQQVLPKRALASGIKYQYPNLQPA
HHHHHHHHHHCCCCCCCCCCHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCHH
LQEILQ
HHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]