| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229868
Identifier: 17229868
GI number: 17229868
Start: 2857583
End: 2857987
Strand: Direct
Name: 17229868
Synonym: alr2376
Alternate gene names: NA
Gene position: 2857583-2857987 (Clockwise)
Preceding gene: 17229866
Following gene: 17229869
Centisome position: 44.55
GC content: 44.94
Gene sequence:
>405_bases ATGCCTACAATGGTCTCCCCAACACCCAAAGCTTTCTCGTACCCACAAACCACCATAGAAAGAGCAAGGCGATCGCTCAT TTGTTCTCCCTTCAATATTGGACTATTTGCAACCATGCGTAGTCAGAGCGTTTCCGTAGGTGCGATCGCCAATGAAACTG GTGTTAAAAACGGTTATACCAAAAATTCATTACCAGAATTGGTATGCGATAACGAATTAGATTGGTTAATCCAAGTGGGT TTATTACGGCGAGAAGTAGACGGACAAGGCATTACAGACGGTTTCCGCCTCACTCCTCTGGGACACCAACTTATAGAAAA ATACCAAGGAAAAAACTTGCCTGCACCTTCCTGGCGCGATCGCCTATACGATATTGTAATTCGTTGGTTTCGGCTCCCCT TTTGA
Upstream 100 bases:
>100_bases AATACTTTCATGACAATCTTAGGAAACTGGTGACTGGGAAAAATTCTTTTCCTGCCCAATTCCCAGTATTCAATTCTAAT TACGAATCGAATTAAGAATT
Downstream 100 bases:
>100_bases ATGTAGGGGTGTAGGGGTATGGGGTTTAGGGGTTTAGGGGTATTCTTTCCCTTACACCCTCACACCCTTACACCCTCACA CCCTTACACCCTCATACCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MPTMVSPTPKAFSYPQTTIERARRSLICSPFNIGLFATMRSQSVSVGAIANETGVKNGYTKNSLPELVCDNELDWLIQVG LLRREVDGQGITDGFRLTPLGHQLIEKYQGKNLPAPSWRDRLYDIVIRWFRLPF
Sequences:
>Translated_134_residues MPTMVSPTPKAFSYPQTTIERARRSLICSPFNIGLFATMRSQSVSVGAIANETGVKNGYTKNSLPELVCDNELDWLIQVG LLRREVDGQGITDGFRLTPLGHQLIEKYQGKNLPAPSWRDRLYDIVIRWFRLPF >Mature_133_residues PTMVSPTPKAFSYPQTTIERARRSLICSPFNIGLFATMRSQSVSVGAIANETGVKNGYTKNSLPELVCDNELDWLIQVGL LRREVDGQGITDGFRLTPLGHQLIEKYQGKNLPAPSWRDRLYDIVIRWFRLPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15185; Mature: 15054
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTMVSPTPKAFSYPQTTIERARRSLICSPFNIGLFATMRSQSVSVGAIANETGVKNGYT CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCC KNSLPELVCDNELDWLIQVGLLRREVDGQGITDGFRLTPLGHQLIEKYQGKNLPAPSWRD CCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCCHHH RLYDIVIRWFRLPF HHHHHHHHHHHCCC >Mature Secondary Structure PTMVSPTPKAFSYPQTTIERARRSLICSPFNIGLFATMRSQSVSVGAIANETGVKNGYT CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCC KNSLPELVCDNELDWLIQVGLLRREVDGQGITDGFRLTPLGHQLIEKYQGKNLPAPSWRD CCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCCHHH RLYDIVIRWFRLPF HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA