| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229855
Identifier: 17229855
GI number: 17229855
Start: 2847122
End: 2848534
Strand: Direct
Name: 17229855
Synonym: alr2363
Alternate gene names: NA
Gene position: 2847122-2848534 (Clockwise)
Preceding gene: 17229853
Following gene: 17229857
Centisome position: 44.39
GC content: 40.06
Gene sequence:
>1413_bases ATGGATTCTGTCCCCATTGAAACAGCTGTTTGTATAAATTCCGAAATCCTCCAGATTACTCCACCAGAGACAACACTCAC GCTAGCTAATCAATCTAGTATTCGCATTCCTAAAGATGCAATCCGCACTAGTTTAAAAGCATCAACTGTCGATTCTGTAT TTGCAACAGTTTATTCTTTGGGTACTGGTGGGATTTTGCTGAGTAATTTTTTGGTGGAGTTAGATGCTAATCCCATCGTC TTCGGGATGTTGTCTTCAATTCCCATGTTGGTCAATCTCATTCAGCCTTTGGGAGCTTACTTATCTGAACGTACCACCAG CCGTTTTCGATACTCCATGTGGATTTTTGGCATCGCACGGTTCTTATGGCTGATTTTATTTATCGGGGTAATTCTATTCA CACGGGGAAGTGTCGATTCTCAACAATTAGAAGTATTGACATTATCAATTCTATTAATCACAAATTTGCTGGGAGGATTA GGGAGTGCTTCTTGGTTAAGCTGGCTAGCAATGATTGTTCCTCGGCGCTTACGAGGTAGGTATTTTGGGTTACGTAATAG CGCGGCTAGCTTGACTAATTTGATTTGTGTACCCTTGGCTGGGTTGCTTGTCTCCCACTGGTACGGCGGAACTATCCAAG GTTATGGCGTAGTACTTTTAATTAGTATCTTGTTTGGGTTTTTGAGTTTGGGATGTCAATACTTCAAAATAGATGTGAAT CCACAATCACAACATGAGGTTATCCAATATCCTCAAAAAAATGAAGTTGTTGATACATCTGCATCCACCTTGCCAATAAA AATTATCCCACCACCAACTAATTCCCATAGCATTTGGAAAAACTCTAATTTCCTCATGTTTCTGGTTTATTTTGGTCTAT GGATGTTGGCTGTAAATATTAGCGCCCCGTTTTTCAATCTCTATATGCTAGACACATTAAATCTAGATGTAAGTTGGGTG ACAATTTACGGTAGCCTGCTAGCAGGAGCTAATTTGCTCATGCTAATTTTGTGGGGCAAGTTAGCAGATAAAATCGGTAA TCGACGTATTTTAATTTCTATAGGAATTTTAGTAGCGCTGACACCATTACTATGGCTGGGAATTGGTATTAATACTTTGG ATATTTGGCTATGGTTGCCTTTATTACATATTTTACTAGGCGGAACTGCGGCGGCTATTGATTTATGTAATAACAATATG CAGTTAGGAATTGCACCATTAAGAAATCAGTCCATTTATTTTGCGATCGCCTCTGCTGTCGCTGGTGTCAGTGGTGCTGT AGGCACAACTATAGGTAGTTTTATCGCCCAATTTTCCCAATATGGAGGTTTATTGGCAGCTTTTGTTCTCTCTACTGCAT TGCGCCTGTTAGCGTTAATTCCCTTGTTTTTTATCCAAGAACCGGGGAAGTGA
Upstream 100 bases:
>100_bases TTAGGGTCATGTTGGTACACAATAACGTAAGTAAAGATACTTGTGGACTCAGTAAAAAACTTCTTACCTGTCTGTACTAA GGTAAATCCCTCTTTTAATT
Downstream 100 bases:
>100_bases TGGGGAGTGGAGACTGGGGAGACAAAGGAAGTAATTATCTTAGGACTTACGTACCCAGATTGTCTGTTGAGACCGGGTGT AAGGGTGTAAGGGTTTCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Transporter; Transporter Facilitator Family
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MDSVPIETAVCINSEILQITPPETTLTLANQSSIRIPKDAIRTSLKASTVDSVFATVYSLGTGGILLSNFLVELDANPIV FGMLSSIPMLVNLIQPLGAYLSERTTSRFRYSMWIFGIARFLWLILFIGVILFTRGSVDSQQLEVLTLSILLITNLLGGL GSASWLSWLAMIVPRRLRGRYFGLRNSAASLTNLICVPLAGLLVSHWYGGTIQGYGVVLLISILFGFLSLGCQYFKIDVN PQSQHEVIQYPQKNEVVDTSASTLPIKIIPPPTNSHSIWKNSNFLMFLVYFGLWMLAVNISAPFFNLYMLDTLNLDVSWV TIYGSLLAGANLLMLILWGKLADKIGNRRILISIGILVALTPLLWLGIGINTLDIWLWLPLLHILLGGTAAAIDLCNNNM QLGIAPLRNQSIYFAIASAVAGVSGAVGTTIGSFIAQFSQYGGLLAAFVLSTALRLLALIPLFFIQEPGK
Sequences:
>Translated_470_residues MDSVPIETAVCINSEILQITPPETTLTLANQSSIRIPKDAIRTSLKASTVDSVFATVYSLGTGGILLSNFLVELDANPIV FGMLSSIPMLVNLIQPLGAYLSERTTSRFRYSMWIFGIARFLWLILFIGVILFTRGSVDSQQLEVLTLSILLITNLLGGL GSASWLSWLAMIVPRRLRGRYFGLRNSAASLTNLICVPLAGLLVSHWYGGTIQGYGVVLLISILFGFLSLGCQYFKIDVN PQSQHEVIQYPQKNEVVDTSASTLPIKIIPPPTNSHSIWKNSNFLMFLVYFGLWMLAVNISAPFFNLYMLDTLNLDVSWV TIYGSLLAGANLLMLILWGKLADKIGNRRILISIGILVALTPLLWLGIGINTLDIWLWLPLLHILLGGTAAAIDLCNNNM QLGIAPLRNQSIYFAIASAVAGVSGAVGTTIGSFIAQFSQYGGLLAAFVLSTALRLLALIPLFFIQEPGK >Mature_470_residues MDSVPIETAVCINSEILQITPPETTLTLANQSSIRIPKDAIRTSLKASTVDSVFATVYSLGTGGILLSNFLVELDANPIV FGMLSSIPMLVNLIQPLGAYLSERTTSRFRYSMWIFGIARFLWLILFIGVILFTRGSVDSQQLEVLTLSILLITNLLGGL GSASWLSWLAMIVPRRLRGRYFGLRNSAASLTNLICVPLAGLLVSHWYGGTIQGYGVVLLISILFGFLSLGCQYFKIDVN PQSQHEVIQYPQKNEVVDTSASTLPIKIIPPPTNSHSIWKNSNFLMFLVYFGLWMLAVNISAPFFNLYMLDTLNLDVSWV TIYGSLLAGANLLMLILWGKLADKIGNRRILISIGILVALTPLLWLGIGINTLDIWLWLPLLHILLGGTAAAIDLCNNNM QLGIAPLRNQSIYFAIASAVAGVSGAVGTTIGSFIAQFSQYGGLLAAFVLSTALRLLALIPLFFIQEPGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51299; Mature: 51299
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSVPIETAVCINSEILQITPPETTLTLANQSSIRIPKDAIRTSLKASTVDSVFATVYSL CCCCCCCEEEEECCCEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC GTGGILLSNFLVELDANPIVFGMLSSIPMLVNLIQPLGAYLSERTTSRFRYSMWIFGIAR CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLWLILFIGVILFTRGSVDSQQLEVLTLSILLITNLLGGLGSASWLSWLAMIVPRRLRGR HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCH YFGLRNSAASLTNLICVPLAGLLVSHWYGGTIQGYGVVLLISILFGFLSLGCQYFKIDVN HCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC PQSQHEVIQYPQKNEVVDTSASTLPIKIIPPPTNSHSIWKNSNFLMFLVYFGLWMLAVNI CCCCHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC SAPFFNLYMLDTLNLDVSWVTIYGSLLAGANLLMLILWGKLADKIGNRRILISIGILVAL CCCEEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHH TPLLWLGIGINTLDIWLWLPLLHILLGGTAAAIDLCNNNMQLGIAPLRNQSIYFAIASAV HHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH AGVSGAVGTTIGSFIAQFSQYGGLLAAFVLSTALRLLALIPLFFIQEPGK HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDSVPIETAVCINSEILQITPPETTLTLANQSSIRIPKDAIRTSLKASTVDSVFATVYSL CCCCCCCEEEEECCCEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC GTGGILLSNFLVELDANPIVFGMLSSIPMLVNLIQPLGAYLSERTTSRFRYSMWIFGIAR CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLWLILFIGVILFTRGSVDSQQLEVLTLSILLITNLLGGLGSASWLSWLAMIVPRRLRGR HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCH YFGLRNSAASLTNLICVPLAGLLVSHWYGGTIQGYGVVLLISILFGFLSLGCQYFKIDVN HCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC PQSQHEVIQYPQKNEVVDTSASTLPIKIIPPPTNSHSIWKNSNFLMFLVYFGLWMLAVNI CCCCHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC SAPFFNLYMLDTLNLDVSWVTIYGSLLAGANLLMLILWGKLADKIGNRRILISIGILVAL CCCEEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHH TPLLWLGIGINTLDIWLWLPLLHILLGGTAAAIDLCNNNMQLGIAPLRNQSIYFAIASAV HHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH AGVSGAVGTTIGSFIAQFSQYGGLLAAFVLSTALRLLALIPLFFIQEPGK HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA