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The map label for this gene is pspA [C]

Identifier: 17229834

GI number: 17229834

Start: 2824625

End: 2825401

Strand: Reverse

Name: pspA [C]

Synonym: all2342

Alternate gene names: 17229834

Gene position: 2825401-2824625 (Counterclockwise)

Preceding gene: 17229835

Following gene: 17229833

Centisome position: 44.05

GC content: 46.07

Gene sequence:

>777_bases
ATGGGATTATTTGATCGCATTAAGCGAGTAGTCAGTGCTAACCTCAATGATTTAGTCAATAAGGCCGAAGATCCAGAAAA
AATGCTGGAGCAAGCCATCCTGGAAATGCAGGAAGACTTGGTACAGTTACGTCAAGGAGTAGCTCAAGCGATCGCTGCCC
AAAAACGTACAGAGAAACAATATAGTGATGCCCAAAATGAAATTAATAAGTGGCAACGCAATGCCCAATTAGCTTTGCAG
AAAGGTGACGAGAACCTAGCCAGACAAGCCCTAGAGCGGAAAAAGACTTATACCGAAACCGGCACAGCCCTAAAAACTAG
CCTAGATCAACAAAGCACTCAAGTTGAAACCCTCAAGCGCAACTTAATCCAGCTAGAAAGCAAGATTTCTGAAGCCAAAA
CCAAGAAAGAAATGCTCAAAGCGCGGATTACCACCGCCAAAGCCCAAGAGCAACTGGAAGGGATGGTACGTGGTATGAAT
AGCAGTAGTGCTATGGCTGCCTTTGAGCGCATGGAAGAAAAAGTCTTGATGCAGGAAGCCCGCGCCCAATCAGCAGCAGA
GTTAGCCGGAGCAGACCTAGAAACCCAATTTGCCCGCTTAGAATCTGGCAGCGATGTTGATGACGAATTGGCAGCCTTGA
AAGCCTCTTTAGCTCCTGCACCTGAGCAAAACCTATTACCCCCACAACAACAGGAACAACAGTCCACTGCGCCTAAATCT
AAAGAGGTTGTTGATTCTGAATTGGATGCCCTACGCAAACAATTAGATCAGTTGTAA

Upstream 100 bases:

>100_bases
AAGCCAACCGGAAAGATTACATTGAAAGTGGAAGCTATTAAATAGTAAAAAAGCGAACTAATCAACCAAGCGCGTAAACT
CCAAAAGGAAAAACAAAGTT

Downstream 100 bases:

>100_bases
GATTTGCAGCCTAACAAATTTTTAGTTAGTCCCACGCCTCTTGGTTGTGGGATTTTGTTCTGTTTGTCCCTTGCTAGTGA
CAACTAACAACTGACAACTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MGLFDRIKRVVSANLNDLVNKAEDPEKMLEQAILEMQEDLVQLRQGVAQAIAAQKRTEKQYSDAQNEINKWQRNAQLALQ
KGDENLARQALERKKTYTETGTALKTSLDQQSTQVETLKRNLIQLESKISEAKTKKEMLKARITTAKAQEQLEGMVRGMN
SSSAMAAFERMEEKVLMQEARAQSAAELAGADLETQFARLESGSDVDDELAALKASLAPAPEQNLLPPQQQEQQSTAPKS
KEVVDSELDALRKQLDQL

Sequences:

>Translated_258_residues
MGLFDRIKRVVSANLNDLVNKAEDPEKMLEQAILEMQEDLVQLRQGVAQAIAAQKRTEKQYSDAQNEINKWQRNAQLALQ
KGDENLARQALERKKTYTETGTALKTSLDQQSTQVETLKRNLIQLESKISEAKTKKEMLKARITTAKAQEQLEGMVRGMN
SSSAMAAFERMEEKVLMQEARAQSAAELAGADLETQFARLESGSDVDDELAALKASLAPAPEQNLLPPQQQEQQSTAPKS
KEVVDSELDALRKQLDQL
>Mature_257_residues
GLFDRIKRVVSANLNDLVNKAEDPEKMLEQAILEMQEDLVQLRQGVAQAIAAQKRTEKQYSDAQNEINKWQRNAQLALQK
GDENLARQALERKKTYTETGTALKTSLDQQSTQVETLKRNLIQLESKISEAKTKKEMLKARITTAKAQEQLEGMVRGMNS
SSAMAAFERMEEKVLMQEARAQSAAELAGADLETQFARLESGSDVDDELAALKASLAPAPEQNLLPPQQQEQQSTAPKSK
EVVDSELDALRKQLDQL

Specific function: The Phage Shock Protein (Psp) Operon (Pspabce) May Play A Significant Role In The Competition For Survival Under Nutrient- Or Energy-Limited Conditions. Pspa Has A Role As A Negative Regulator, Is Required For Efficient Translocation And Has An Unknown Fu

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

Organism=Escherichia coli, GI2367118, Length=221, Percent_Identity=33.9366515837104, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 28797; Mature: 28666

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLFDRIKRVVSANLNDLVNKAEDPEKMLEQAILEMQEDLVQLRQGVAQAIAAQKRTEKQ
CCHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSDAQNEINKWQRNAQLALQKGDENLARQALERKKTYTETGTALKTSLDQQSTQVETLKR
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLIQLESKISEAKTKKEMLKARITTAKAQEQLEGMVRGMNSSSAMAAFERMEEKVLMQEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
RAQSAAELAGADLETQFARLESGSDVDDELAALKASLAPAPEQNLLPPQQQEQQSTAPKS
HHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCH
KEVVDSELDALRKQLDQL
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GLFDRIKRVVSANLNDLVNKAEDPEKMLEQAILEMQEDLVQLRQGVAQAIAAQKRTEKQ
CHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSDAQNEINKWQRNAQLALQKGDENLARQALERKKTYTETGTALKTSLDQQSTQVETLKR
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLIQLESKISEAKTKKEMLKARITTAKAQEQLEGMVRGMNSSSAMAAFERMEEKVLMQEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
RAQSAAELAGADLETQFARLESGSDVDDELAALKASLAPAPEQNLLPPQQQEQQSTAPKS
HHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCH
KEVVDSELDALRKQLDQL
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]