| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229823
Identifier: 17229823
GI number: 17229823
Start: 2809813
End: 2810469
Strand: Direct
Name: 17229823
Synonym: alr2331
Alternate gene names: NA
Gene position: 2809813-2810469 (Clockwise)
Preceding gene: 17229822
Following gene: 17229827
Centisome position: 43.81
GC content: 43.99
Gene sequence:
>657_bases ATGTGGCTAACTGATTTGTTGGTCGATTTAGGTGCGAATGTAGGAACGCCTCCTGGTAATTCCTACATCGATGAGTTTGA AAGGTTATTGGATAGCGAACAGCAAGACCCTACCCAAGCACTAGAAGAATTTGTAATTTCTACCCTAGCGGCGATTAACG TCACCGAGAAACGTGGTTGCGAGTATTTTTCAGCCCACATTTACGCCCTCAAAAAAGCGCCCCAAACAGCAGAAAATATC CAAATCCGCGAAACCATTGCAAAAATTCTGCCCGAAGAAGCCGGACACGTTCGTTGGGGTAATCGCTGGTTAGCACAGAT AGCAAATAAAAGCCCAGAACATCGGCAAAAAGTCGAACAAGCCAAACGCAAATATGCTGCCATTGAACAAGCAGCCTTTG AATCAGGGATGGATATTACTTTAGGTGCAGAACTGCGGCGAGTTGCGAATCTGATGGGAGTCGCAAATACAATGCCCATG TGGCAACGACCCCAATATCTAATGGAACGTTTACCACAAACTTTGCTAGCACCTCAATTGCAATTTACAAGAATTCAAGC TGCTCAAAGAGCTTGGCAACGCAATCCACAAACATTTATGGAAAAGTTCGTACCAATGTTTATCAATGGTGTGAAGAAGA TGGAAAATAAGCCTTAG
Upstream 100 bases:
>100_bases TTGTAAAGACCTGACAGACCTGATTGAAAGGTTAAATGGCAAGCCACCGGAACTAATCAGAGATTTATCTCACCACATCT CAGATGAAGCGCGTCATGCC
Downstream 100 bases:
>100_bases TTGAAAGGAGCAGATACCCGAATTTTTGAAAAATTCGGGTATCTTGTGATTGAAGACTGGTTATCAATTTCAGGACTTAC GTAACCGAAACTCTCTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MWLTDLLVDLGANVGTPPGNSYIDEFERLLDSEQQDPTQALEEFVISTLAAINVTEKRGCEYFSAHIYALKKAPQTAENI QIRETIAKILPEEAGHVRWGNRWLAQIANKSPEHRQKVEQAKRKYAAIEQAAFESGMDITLGAELRRVANLMGVANTMPM WQRPQYLMERLPQTLLAPQLQFTRIQAAQRAWQRNPQTFMEKFVPMFINGVKKMENKP
Sequences:
>Translated_218_residues MWLTDLLVDLGANVGTPPGNSYIDEFERLLDSEQQDPTQALEEFVISTLAAINVTEKRGCEYFSAHIYALKKAPQTAENI QIRETIAKILPEEAGHVRWGNRWLAQIANKSPEHRQKVEQAKRKYAAIEQAAFESGMDITLGAELRRVANLMGVANTMPM WQRPQYLMERLPQTLLAPQLQFTRIQAAQRAWQRNPQTFMEKFVPMFINGVKKMENKP >Mature_218_residues MWLTDLLVDLGANVGTPPGNSYIDEFERLLDSEQQDPTQALEEFVISTLAAINVTEKRGCEYFSAHIYALKKAPQTAENI QIRETIAKILPEEAGHVRWGNRWLAQIANKSPEHRQKVEQAKRKYAAIEQAAFESGMDITLGAELRRVANLMGVANTMPM WQRPQYLMERLPQTLLAPQLQFTRIQAAQRAWQRNPQTFMEKFVPMFINGVKKMENKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24955; Mature: 24955
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWLTDLLVDLGANVGTPPGNSYIDEFERLLDSEQQDPTQALEEFVISTLAAINVTEKRGC CHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH EYFSAHIYALKKAPQTAENIQIRETIAKILPEEAGHVRWGNRWLAQIANKSPEHRQKVEQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHCCCHHHHHHHHH AKRKYAAIEQAAFESGMDITLGAELRRVANLMGVANTMPMWQRPQYLMERLPQTLLAPQL HHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHH QFTRIQAAQRAWQRNPQTFMEKFVPMFINGVKKMENKP HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MWLTDLLVDLGANVGTPPGNSYIDEFERLLDSEQQDPTQALEEFVISTLAAINVTEKRGC CHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH EYFSAHIYALKKAPQTAENIQIRETIAKILPEEAGHVRWGNRWLAQIANKSPEHRQKVEQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHCCCHHHHHHHHH AKRKYAAIEQAAFESGMDITLGAELRRVANLMGVANTMPMWQRPQYLMERLPQTLLAPQL HHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHH QFTRIQAAQRAWQRNPQTFMEKFVPMFINGVKKMENKP HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA