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The map label for this gene is yfgC [C]

Identifier: 17229804

GI number: 17229804

Start: 2785825

End: 2787273

Strand: Direct

Name: yfgC [C]

Synonym: alr2312

Alternate gene names: 17229804

Gene position: 2785825-2787273 (Clockwise)

Preceding gene: 17229803

Following gene: 17229805

Centisome position: 43.44

GC content: 44.03

Gene sequence:

>1449_bases
GTGGAACTCAGCATGAAGCGAATCAGTAAGTCTCTGCTGCTAACCTTGAATTGGATATTGTTGTCAGTTGGCACAACAAT
ATTAATTCTTCTCACTCAACCGATAGCACCAGTACCAGCCCAAGAACCTCCCGCCCCCACTGAGCAAACAAACACACCCC
AACCCGAAAATCCCAATGATCAAAAGCTCAGAGATGCACTAAAACGCTCATCTCCCTCGGAAACACCGCCCCAGTCCACA
ACAAAAGCACCGGAATCGGCGGAACCCCCACTCAGTCCAGAAGAAATTGCCCGTCAACAAAAACTCATAGAAGCAGATAA
ACTTTATCTGGCGGGACAAATTGCCGAGGCGGAAAAAATTTACCGCGAAGTTAAAACACCGTTTACTCAAACATCTGCAT
CCAAAGAACGAAAACCAGCCATCCTTGACCCCACAGAACTTTCACCAGCAGGTAAAGTCTATTGGCGAGAAGCAGAGGCG
GGGATAGCTAAGAAATTGCAAACCCGAACTTTAGTACCTCTGCAATTATTAGTTGAACAATATCCCGAATTTGTCCCTGG
CCATATTCGCTACGCTGAAGTTCTCACCCAATACGATCGCCACACAGAAGCATTAGATATTTTAGAACGGGCATCATCTC
TTTATCCCAATCAACCAAAGTTAACTCAAGCCAGAGTTAGCGCCTTGGCTAAATCAAAGAAATGGATGGAAGCATCTTTA
GCTGCAAGGCAATTTGCTATTCTCAACCCTAATAATCCCCAAGCACCAGAATTTACCCAATTAGCCGAGAAACATCTTCA
ACGCTATCAATCCTACGTTCGAGAGGAAATTAGAGGTAATTTAATTAGTAACGTCATTACAGGCGCATTGGGTTATGCGG
TTACTGGTAGCTTATTGGGGCCGTTTTCTGCCCTTGACTCCACCATTTTGCTACTACAGGGCGAAAAATCTATTGGTGAA
TCGGTAGCAAAACAGGCGAAAAAACAGCTGCCTTTGGTCATAGACGATGATGTTTTAGCCTACGTCAATGATATTGGGCA
GAAACTGGCGAAAGTCGCGGGTAGAAACGAATTTAAATACGAATTTTTTGTCATTCCGGAAGAAGAACTTAACGCCTTTG
CCCTACCGGGAGGGAAAATTTTTATTAATGCTGGTGCGATCGCCAAAACCACTTCCGAAGCAGAATTAGCGGGATTAGTA
GCACATGAATTATCTCATGTTGTCTTATCCCACGGCTTTCAATTAGTTACCCAAGGAAATCTCATCTCTAACGTTACTCA
ATATCTGCCCTTTGGTGGCACTATTGGGCAACTTTTCGCCATGAATTACAGCCGGGATATGGAAAGACAGGCAGATATTT
TGGGTACACGGTTAATTGTTGCTAGTGGCTATGCTGCTGATGGCTTGCGGAATTTAATGGTGACACTAGACAAGCAAAAA
AAAATATGA

Upstream 100 bases:

>100_bases
TGATGGCATCTTTTTAGTAGTTACTGTAAAGCAATGACGATCGCTCTAGTCGGATGAGCCGAATTGCTCCTACCCTAAAT
AGAAGAGCCTTTTGTATTAG

Downstream 100 bases:

>100_bases
CATTCCCACTTGGTTATCTTCCCACCCAGGCGGTAATGAGCGAGTTAGTTATCTAGAAAACTTAATTTCTCGCAATAGTT
ATAATCGCTACGCTTATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MELSMKRISKSLLLTLNWILLSVGTTILILLTQPIAPVPAQEPPAPTEQTNTPQPENPNDQKLRDALKRSSPSETPPQST
TKAPESAEPPLSPEEIARQQKLIEADKLYLAGQIAEAEKIYREVKTPFTQTSASKERKPAILDPTELSPAGKVYWREAEA
GIAKKLQTRTLVPLQLLVEQYPEFVPGHIRYAEVLTQYDRHTEALDILERASSLYPNQPKLTQARVSALAKSKKWMEASL
AARQFAILNPNNPQAPEFTQLAEKHLQRYQSYVREEIRGNLISNVITGALGYAVTGSLLGPFSALDSTILLLQGEKSIGE
SVAKQAKKQLPLVIDDDVLAYVNDIGQKLAKVAGRNEFKYEFFVIPEEELNAFALPGGKIFINAGAIAKTTSEAELAGLV
AHELSHVVLSHGFQLVTQGNLISNVTQYLPFGGTIGQLFAMNYSRDMERQADILGTRLIVASGYAADGLRNLMVTLDKQK
KI

Sequences:

>Translated_482_residues
MELSMKRISKSLLLTLNWILLSVGTTILILLTQPIAPVPAQEPPAPTEQTNTPQPENPNDQKLRDALKRSSPSETPPQST
TKAPESAEPPLSPEEIARQQKLIEADKLYLAGQIAEAEKIYREVKTPFTQTSASKERKPAILDPTELSPAGKVYWREAEA
GIAKKLQTRTLVPLQLLVEQYPEFVPGHIRYAEVLTQYDRHTEALDILERASSLYPNQPKLTQARVSALAKSKKWMEASL
AARQFAILNPNNPQAPEFTQLAEKHLQRYQSYVREEIRGNLISNVITGALGYAVTGSLLGPFSALDSTILLLQGEKSIGE
SVAKQAKKQLPLVIDDDVLAYVNDIGQKLAKVAGRNEFKYEFFVIPEEELNAFALPGGKIFINAGAIAKTTSEAELAGLV
AHELSHVVLSHGFQLVTQGNLISNVTQYLPFGGTIGQLFAMNYSRDMERQADILGTRLIVASGYAADGLRNLMVTLDKQK
KI
>Mature_482_residues
MELSMKRISKSLLLTLNWILLSVGTTILILLTQPIAPVPAQEPPAPTEQTNTPQPENPNDQKLRDALKRSSPSETPPQST
TKAPESAEPPLSPEEIARQQKLIEADKLYLAGQIAEAEKIYREVKTPFTQTSASKERKPAILDPTELSPAGKVYWREAEA
GIAKKLQTRTLVPLQLLVEQYPEFVPGHIRYAEVLTQYDRHTEALDILERASSLYPNQPKLTQARVSALAKSKKWMEASL
AARQFAILNPNNPQAPEFTQLAEKHLQRYQSYVREEIRGNLISNVITGALGYAVTGSLLGPFSALDSTILLLQGEKSIGE
SVAKQAKKQLPLVIDDDVLAYVNDIGQKLAKVAGRNEFKYEFFVIPEEELNAFALPGGKIFINAGAIAKTTSEAELAGLV
AHELSHVVLSHGFQLVTQGNLISNVTQYLPFGGTIGQLFAMNYSRDMERQADILGTRLIVASGYAADGLRNLMVTLDKQK
KI

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=142, Percent_Identity=26.7605633802817, Blast_Score=72, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011716
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48; PF07720 TPR_3 [H]

EC number: NA

Molecular weight: Translated: 53098; Mature: 53098

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELSMKRISKSLLLTLNWILLSVGTTILILLTQPIAPVPAQEPPAPTEQTNTPQPENPND
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
QKLRDALKRSSPSETPPQSTTKAPESAEPPLSPEEIARQQKLIEADKLYLAGQIAEAEKI
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YREVKTPFTQTSASKERKPAILDPTELSPAGKVYWREAEAGIAKKLQTRTLVPLQLLVEQ
HHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHH
YPEFVPGHIRYAEVLTQYDRHTEALDILERASSLYPNQPKLTQARVSALAKSKKWMEASL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
AARQFAILNPNNPQAPEFTQLAEKHLQRYQSYVREEIRGNLISNVITGALGYAVTGSLLG
HHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PFSALDSTILLLQGEKSIGESVAKQAKKQLPLVIDDDVLAYVNDIGQKLAKVAGRNEFKY
HHHHHCCEEEEEECCHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHCCCCCEE
EFFVIPEEELNAFALPGGKIFINAGAIAKTTSEAELAGLVAHELSHVVLSHGFQLVTQGN
EEEEEEHHHCCEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCH
LISNVTQYLPFGGTIGQLFAMNYSRDMERQADILGTRLIVASGYAADGLRNLMVTLDKQK
HHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHC
KI
CC
>Mature Secondary Structure
MELSMKRISKSLLLTLNWILLSVGTTILILLTQPIAPVPAQEPPAPTEQTNTPQPENPND
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
QKLRDALKRSSPSETPPQSTTKAPESAEPPLSPEEIARQQKLIEADKLYLAGQIAEAEKI
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YREVKTPFTQTSASKERKPAILDPTELSPAGKVYWREAEAGIAKKLQTRTLVPLQLLVEQ
HHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHH
YPEFVPGHIRYAEVLTQYDRHTEALDILERASSLYPNQPKLTQARVSALAKSKKWMEASL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
AARQFAILNPNNPQAPEFTQLAEKHLQRYQSYVREEIRGNLISNVITGALGYAVTGSLLG
HHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PFSALDSTILLLQGEKSIGESVAKQAKKQLPLVIDDDVLAYVNDIGQKLAKVAGRNEFKY
HHHHHCCEEEEEECCHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHCCCCCEE
EFFVIPEEELNAFALPGGKIFINAGAIAKTTSEAELAGLVAHELSHVVLSHGFQLVTQGN
EEEEEEHHHCCEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCH
LISNVTQYLPFGGTIGQLFAMNYSRDMERQADILGTRLIVASGYAADGLRNLMVTLDKQK
HHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHC
KI
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]